prot_E-fasciculatus_F_contig16072.4155.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig16072.4155.1
Unique Nameprot_E-fasciculatus_F_contig16072.4155.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length550
Homology
BLAST of mRNA_E-fasciculatus_F_contig16072.4155.1 vs. uniprot
Match: D8LPM9_ECTSI (BRCT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPM9_ECTSI)

HSP 1 Score: 356 bits (914), Expect = 1.300e-108
Identity = 439/561 (78.25%), Postives = 447/561 (79.68%), Query Frame = 0
Query:    1 MDDIGVVDDGGGEADTPTTRPVSRLAPRNGPSLGQTSGSGGRQLAPVAEGRPVSLAAAAAAPAALETAEALLSMSPSVRHGGGFLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--ACGDPVGTPNSTASSSRRLGPGSPSSATDLXXXXXXXXXXXXXSYRSPALARPPNASXXXXXXXXXXXXXXXXXXXXXXXXXXXXHTARRPATPSFKAGDLVSVPSRSSPGVNKEGGVAKVTLVRPDGTCDVKYIVHHGREKGVPAGIISFYAVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSLSRVRRTSRKGWCSPDLAAGQANAACLSYLLGETQHPELDLDPDLGELLDPDEGSSGAGSAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTNRGDKG------RNRPQASDGVEGGPSQGQGRXXXXXXXXXXS---ESTEGMNVFDISALSAGSNSGDSGM 550
            MDD+GV D    E DTPTTRPVS  APRN PSLGQTS S GR+LAPVAEG PVSLAAAAAAPAALETAE LLSMSPSVRHG G LE                      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  AC DPVGTPNSTAS SRRLGPGSPSSAT L    XXXXXXXXX              XXXXXXXXXXXXXXXXXXXXXXXXXXXX   RRPATPSFKAGDLVSVPSRSSPGVNKEGGVAKVTLVRPDGTCDVKYIVHHGREKGVPAGIISFYAVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                  SS  RVRRTSRKGWCSPDLAAGQA AACLSY+LGETQHPELDLDPDLGELLDP+EGSSGAGSAG       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX             R+  Q SD VEGGPSQGQGRXXXXXXXX  S   E++EGM VFDISALSAGSNSGD+GM
Sbjct:    1 MDDVGVDDHR--EGDTPTTRPVSHQAPRNTPSLGQTSSSRGRELAPVAEGPPVSLAAAAAAPAALETAETLLSMSPSVRHGSGSLEHGRDGGAPPARPTSSVSRRDGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACDDPVGTPNSTASFSRRLGPGSPSSATGLLRTTXXXXXXXXXXXXXXXXXX----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRPATPSFKAGDLVSVPSRSSPGVNKEGGVAKVTLVRPDGTCDVKYIVHHGREKGVPAGIISFYAVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLGSSSRSSTPASKEAPSSS--RVRRTSRKGWCSPDLAAGQAYAACLSYMLGETQHPELDLDPDLGELLDPNEGSSGAGSAGDGGGKVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDERQVSDDVEGGPSQGQGRXXXXXXXXISSSANEASEGMEVFDISALSAGSNSGDNGM 553          
BLAST of mRNA_E-fasciculatus_F_contig16072.4155.1 vs. uniprot
Match: A0A6H5KV73_9PHAE (BRCT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV73_9PHAE)

HSP 1 Score: 355 bits (911), Expect = 6.830e-105
Identity = 420/563 (74.60%), Postives = 428/563 (76.02%), Query Frame = 0
Query:    1 MDDIGVVDDGGGEADTPTTRPVSRLAPRNGPSLGQTSGSGGRQLAPVAEGRPVSLAAAAA-APAALETAEALLSMSPSVRHGGGFLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACGDPVGTPNSTASSSRRLGPGSPSSATDLXXXXXXXXXXXXXSYRSPALARPPNASXXXXXXXXXXXXXXXXXXXXXXXXXXXXHTA--------RRPATPSFKAGDLVSVPSRSSPGVNKEGGVAKVTLVRPDGTCDVKYIVHHGREKGVPAGIISFYAVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSLSRVRRTSRKGWCSPDLAAGQANAACLSYLLGETQHPELDLDPDLGELLDPDEGSSGAGSAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-TNRGDKGRNRPQASDGVEGGPSQGQGRXXXXXXXXXXSESTEGMN---VFDISALSAGSNSGDSGM 550
            MDD+GV D    E DTPTT PVS  APRN PSLGQTS SGG + APV +G PVSLAAAAA APAALETAEALLSMSPSVRHGGG LEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  AC DPVGTPNSTAS SRRLGPGSPSSAT L     XXXXXXXX              XXXXXXXXXXXXXXXXXXXXXXXXXXXX           R PATPSFKAGDLVSVPSRSSPGVNKEGGVAKVTLVRP+GTCDVKYIVHHGREKGVPAGIISFYAVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          SS SRVRRTSRKGWCSPDLAAGQA AACLSY+LGETQHPELDLDPDLGELLDP+EGSS AGSAG  XXXXXXXXXXXXXXXXXXXXXXXXXXX                                                  T RGD+GRN  QASDGVEGGPSQGQGR  XXXXXXXX           VFDISA SAGSNSGD+GM
Sbjct:  640 MDDVGVDDHR--EGDTPTTTPVSHQAPRNPPSLGQTSSSGGHEFAPVRKGPPVSLAAAAATAPAALETAEALLSMSPSVRHGGGSLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGACDDPVGTPNSTASLSRRLGPGSPSSATGLLRTTRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPPATPSFKAGDLVSVPSRSSPGVNKEGGVAKVTLVRPNGTCDVKYIVHHGREKGVPAGIISFYAVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSTPASKGAPSSSSRVRRTSRKGWCSPDLAAGQAYAACLSYMLGETQHPELDLDPDLGELLDPNEGSSRAGSAGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXGAKEGDDGVTVVVSDRGVGSSGGEGGQGSVKGVVGKRKRIARGGGVDDDDTTRGDRGRNERQASDGVEGGPSQGQGRRHXXXXXXXXXXXXXXXXXXXVFDISASSAGSNSGDNGM 1200          
BLAST of mRNA_E-fasciculatus_F_contig16072.4155.1 vs. uniprot
Match: A0A485KVR3_9STRA (Aste57867_12351 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KVR3_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 7.890e-6
Identity = 30/60 (50.00%), Postives = 37/60 (61.67%), Query Frame = 0
Query:  236 FKAGDLVSVPSRSSPGVNKEGGVAKVTLVRPDGTCDVKYIVHHGREKGVPAGIISFYAVD 295
             K G LV V  R  PG+NKEGGVA+V  V  DGT +VKY+V  GR++ +P   I   A D
Sbjct:   32 LKQGTLVMVDPRFWPGMNKEGGVARVERVNQDGTVNVKYVVVGGRDRNIPPACIHVTAAD 91          
BLAST of mRNA_E-fasciculatus_F_contig16072.4155.1 vs. uniprot
Match: A0A1Z5KMS0_FISSO (BRCA1-associated RING domain protein 1 n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KMS0_FISSO)

HSP 1 Score: 57.8 bits (138), Expect = 4.860e-5
Identity = 29/61 (47.54%), Postives = 41/61 (67.21%), Query Frame = 0
Query:  232 ATPSFKAGDLVSVPSRSSPGVNKEGGVAKVTLVRPDGTCDVKYIVHHGREKGVPAGIISFY 292
            AT SFK GD+++V  R+ PG+NK+GG+AKV  V  D + DV Y++  G+EK V A   S +
Sbjct:  407 ATASFKVGDIIAVKPRTWPGINKQGGIAKVIKVNEDNSYDVSYVLG-GKEKRVDAVFCSIH 466          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig16072.4155.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LPM9_ECTSI1.300e-10878.25BRCT domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5KV73_9PHAE6.830e-10574.60BRCT domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A485KVR3_9STRA7.890e-650.00Aste57867_12351 protein n=1 Tax=Aphanomyces stella... [more]
A0A1Z5KMS0_FISSO4.860e-547.54BRCA1-associated RING domain protein 1 n=1 Tax=Fis... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig16072contigE-fasciculatus_F_contig16072:1..1650 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig16072.4155.1mRNA_E-fasciculatus_F_contig16072.4155.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig16072 1..1650 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig16072.4155.1 ID=prot_E-fasciculatus_F_contig16072.4155.1|Name=mRNA_E-fasciculatus_F_contig16072.4155.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=550bp
MDDIGVVDDGGGEADTPTTRPVSRLAPRNGPSLGQTSGSGGRQLAPVAEG
RPVSLAAAAAAPAALETAEALLSMSPSVRHGGGFLEHHRDGGAPPARPTT
SVSRRDGDGDDMAAAAGGCGGGSKPSVPPTEAEAKKEEGGACGDPVGTPN
STASSSRRLGPGSPSSATDLLRTTRRAMPPPPPSYRSPALARPPNASPSS
STSTPPPPPAPLPSRTPPPPPPPPPHTARRPATPSFKAGDLVSVPSRSSP
GVNKEGGVAKVTLVRPDGTCDVKYIVHHGREKGVPAGIISFYAVDDDDEE
SSSAGSGGDGRRERGGGGGRGAVAAGSSGSLSRSSSPASKEVPPPSSLSR
VRRTSRKGWCSPDLAAGQANAACLSYLLGETQHPELDLDPDLGELLDPDE
GSSGAGSAGGGKVDESRREDGASLAAAPAATAAEEEAKEGDDEVTVVASS
RGVGSSGGEGRQGGSKGVVGKRKRMTRGGGGGGDDDDTNRGDKGRNRPQA
SDGVEGGPSQGQGRRRRRRRSSSASESTEGMNVFDISALSAGSNSGDSGM
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