prot_E-fasciculatus_F_contig16063.4151.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig16063.4151.1
Unique Nameprot_E-fasciculatus_F_contig16063.4151.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length220
Homology
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BLAST of mRNA_E-fasciculatus_F_contig16063.4151.1 vs. uniprot
Match: A0A6H5KQV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQV5_9PHAE)

HSP 1 Score: 167 bits (422), Expect = 2.490e-44
Identity = 111/134 (82.84%), Postives = 116/134 (86.57%), Query Frame = 0 
Query:   13 TPTRPPASGSAIGPGRQAEVFGVQHSTAEARIQELRDRQRGKATTVTLQSSVPMPSPGGPVTPGTDWDLAQGIAPSPGPNGRRRALMVGRQNRXXXXXXXXXXXXXXXXST--DGGAGAPGDRSSSRPPSSRGS 144
            TP+R  ASGSAIG  RQAEVFG QHSTAEARIQELRDRQ  +AT VT  +S+ MPSPGGPVTPGTDWDLAQGIAPSPGPNGRRR LM+GRQNRXXXXXXXXXXXXXXXX T  DGG G  GDRSSSRPPSSRGS
Sbjct:  455 TPSRRAASGSAIGSARQAEVFGSQHSTAEARIQELRDRQGVEATPVTFPASMSMPSPGGPVTPGTDWDLAQGIAPSPGPNGRRRTLMIGRQNRXXXXXXXXXXXXXXXXRTSMDGGEGTSGDRSSSRPPSSRGS 588
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BLAST of mRNA_E-fasciculatus_F_contig16063.4151.1 vs. uniprot
Match: D8LHR0_ECTSI (C-type lectin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHR0_ECTSI)

HSP 1 Score: 116 bits (290), Expect = 2.970e-26
Identity = 61/76 (80.26%), Postives = 66/76 (86.84%), Query Frame = 0 
Query:    1 MYDGGSEAGSRYTPTRPPASGSAIGPGRQAEVFGVQHSTAEARIQELRDRQRGKATTVTLQSSVPMPSPGGPVTPG 76
            MYDGGSEAGSRYTP+RP ASGSA+G  RQAEVFG Q+STA ARIQELRDRQR KAT VT Q+ + MPSPGGPVTPG
Sbjct:  973 MYDGGSEAGSRYTPSRPAASGSAVGSARQAEVFGSQYSTAGARIQELRDRQRVKATPVTFQAPMSMPSPGGPVTPG 1048
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig16063.4151.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KQV5_9PHAE2.490e-4482.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHR0_ECTSI2.970e-2680.26C-type lectin domain-containing protein n=1 Tax=Ec... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig16063contigE-fasciculatus_F_contig16063:1383..2856 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig16063.4151.1mRNA_E-fasciculatus_F_contig16063.4151.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig16063 97..2856 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig16063.4151.1 ID=prot_E-fasciculatus_F_contig16063.4151.1|Name=mRNA_E-fasciculatus_F_contig16063.4151.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=220bp
MYDGGSEAGSRYTPTRPPASGSAIGPGRQAEVFGVQHSTAEARIQELRDR
QRGKATTVTLQSSVPMPSPGGPVTPGTDWDLAQGIAPSPGPNGRRRALMV
GRQNRSRSRSKGRHGGGSGRTSTDGGAGAPGDRSSSRPPSSRGSSVSRGA
AGVGSSRSSSAGGGGGGGGDNSSSPTRSRGPRGRGTPGRAGARGGSTTPG
SRGGGGEDSDSNSVYVEDSR
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