prot_E-fasciculatus_F_contig160.4113.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig160.4113.1
Unique Nameprot_E-fasciculatus_F_contig160.4113.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length93
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig160.4113.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000014PAS domainTIGRFAMTIGR00229TIGR00229coord: 2..90
e-value: 1.3E-6
score: 26.5
IPR000014PAS domainPROSITEPS50112PAScoord: 14..66
score: 9.138
IPR013767PAS foldPFAMPF00989PAScoord: 13..88
e-value: 3.6E-6
score: 27.0
NoneNo IPR availableGENE3D3.30.450.20coord: 1..92
e-value: 1.4E-9
score: 39.3
IPR035965PAS domain superfamilySUPERFAMILY55785PYP-like sensor domain (PAS domain)coord: 3..91

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig160contigE-fasciculatus_F_contig160:30646..31381 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig160.4113.1mRNA_E-fasciculatus_F_contig160.4113.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig160 30646..31396 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig160.4113.1 ID=prot_E-fasciculatus_F_contig160.4113.1|Name=mRNA_E-fasciculatus_F_contig160.4113.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=93bp
MVEEGPDMMSIHGLDHRAQFRYASSAFQRVAGINPRGVLGRGLTDLVVAE
DHVVVQEALLKVIFTRASDSVVSYRMARPHGDPLDVETSIRTG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035965PAS-like_dom_sf
IPR013767PAS_fold
IPR000014PAS