prot_E-fasciculatus_F_contig15954.4079.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig15954.4079.1
Unique Nameprot_E-fasciculatus_F_contig15954.4079.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length124
Homology
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BLAST of mRNA_E-fasciculatus_F_contig15954.4079.1 vs. uniprot
Match: D8LJQ1_ECTSI (Polyprenol reductase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJQ1_ECTSI)

HSP 1 Score: 167 bits (424), Expect = 5.150e-49
Identity = 83/98 (84.69%), Postives = 90/98 (91.84%), Query Frame = 0 
Query:    1 MVELCNAERLGWAVLTILTAVVAATPRLYSIFLHGKLRPGASTTSEAGFPLRWLKVEVPKRLFSHFYFFCLASSALVIVDVLVYGGSLVVRRIQVRAI 98
            MVELCNAERLGWAVLTILTA VAATPRLYSIFLHGKLRPGASTTSEAGFPLRWLKVEVPKRLFSHFYFFCL SSALV +D ++YGGSL V  +Q +++
Sbjct:    1 MVELCNAERLGWAVLTILTAFVAATPRLYSIFLHGKLRPGASTTSEAGFPLRWLKVEVPKRLFSHFYFFCLVSSALVFIDTILYGGSLFVGSVQGKSV 98
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15954.4079.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LJQ1_ECTSI5.150e-4984.69Polyprenol reductase n=2 Tax=Ectocarpus TaxID=2879... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..32
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 66..90
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 91..123
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 33..65
NoneNo IPR availableTMHMMTMhelixcoord: 12..34
NoneNo IPR availableTMHMMTMhelixcoord: 68..90

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig15954contigE-fasciculatus_F_contig15954:791..1889 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig15954.4079.1mRNA_E-fasciculatus_F_contig15954.4079.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig15954 633..1973 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig15954.4079.1 ID=prot_E-fasciculatus_F_contig15954.4079.1|Name=mRNA_E-fasciculatus_F_contig15954.4079.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=124bp
MVELCNAERLGWAVLTILTAVVAATPRLYSIFLHGKLRPGASTTSEAGFP
LRWLKVEVPKRLFSHFYFFCLASSALVIVDVLVYGGSLVVRRIQVRAIEA
KAPATKQRNRSERKGAYSRKRMQ*
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