prot_E-fasciculatus_F_contig15837.4008.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig15837.4008.1
Unique Nameprot_E-fasciculatus_F_contig15837.4008.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length240
Homology
BLAST of mRNA_E-fasciculatus_F_contig15837.4008.1 vs. uniprot
Match: A0A6H5K4B9_9PHAE (UBA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4B9_9PHAE)

HSP 1 Score: 387 bits (995), Expect = 3.000e-124
Identity = 213/258 (82.56%), Postives = 218/258 (84.50%), Query Frame = 0
Query:    1 SKRLPPAPRGAAYCFLPLPVVTGLPVHVNGYFELSSNRRDIWSGSDMVGDGELRANWNKALVEELAASCYTRVLVAAKAALGGGGAYEALWPTGSTAEGSMWRGLADSLMRLVRPLPLLQTRSAIAGGWVAPQKCVVWTGGGVNGGGEGNERELRALAEVLLAENV-------PLVEG-----------SKELRSLLLSSGCATFSTTPAFVRQLFRRLASPAPGRLAARGVGSGAVGANGTASLRSGNPSARSTCIL 240
            SKRLPPAPRGAAYCFLPLPV+TGLPVHVNG        RDIWSGSDMVGDGELRANWNKALVEELAASCYTRVLVAAKA+LGGG AYEALWPTGSTAEGSMWRGLADSLMRLVRPLPLL+TRS IAGGWVAPQKCVVWTGG         ERELRALAEVLLAENV         V G           SKELRSLLLSSGCATFSTTPAFVRQLF++LASPAPGRLAARGVGSGAVGANGTASLRSGNPSARSTCIL
Sbjct:   42 SKRLPPAPRGAAYCFLPLPVLTGLPVHVNG--------RDIWSGSDMVGDGELRANWNKALVEELAASCYTRVLVAAKASLGGGAAYEALWPTGSTAEGSMWRGLADSLMRLVRPLPLLKTRSPIAGGWVAPQKCVVWTGGXXXXXXXXRERELRALAEVLLAENVRGIHEIPXTVAGREVNGSCEPWPSKELRSLLLSSGCATFSTTPAFVRQLFKKLASPAPGRLAARGVGSGAVGANGTASLRSGNPSARSTCIL 291          
BLAST of mRNA_E-fasciculatus_F_contig15837.4008.1 vs. uniprot
Match: A0A835YL62_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL62_9STRA)

HSP 1 Score: 159 bits (403), Expect = 5.060e-41
Identity = 93/184 (50.54%), Postives = 114/184 (61.96%), Query Frame = 0
Query:    9 RGAAYCFLPLPVVTGLPVHVNGYFELSSNRRDIWSGSDMVGDGELRANWNKALVEELAASCYTRVLVAAKAALGGGGAYEALWP----TGST-----AEGSMWRGLADSLMRLVRPLPLLQTRSAIAGGWVAPQKCVVWTGGGVNGGGEGNERELRALAEVLLAENVPLVEGSKELRSLLLSSG 183
            RG AYCFLPLPV TGLPVHVNGYFELSSNRRDIW+G DM GDG +RA WN ALVEE+AASCY R+L+  +  LG   AY+ LWP     GS      A   +W G     + LVR  P+LQT     G WV P+  VV  GG ++   +     L+AL   LL E VPLV+ ++ ++  L  +G
Sbjct:  375 RGRAYCFLPLPVFTGLPVHVNGYFELSSNRRDIWTGDDMAGDGAVRAQWNAALVEEIAASCYARLLLGVRTELGDRAAYDTLWPPLPSAGSVTSAVGAPAGVWAGCVAVFVALVRAQPVLQTAHE-KGHWVTPRDAVV-LGGALDDAPDAERCRLKAL---LLGEGVPLVDCARAIQRGLAHAG 553          
BLAST of mRNA_E-fasciculatus_F_contig15837.4008.1 vs. uniprot
Match: W7U1E4_9STRA (Ubiquitin-associated/translation elongation factor EF1B n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7U1E4_9STRA)

HSP 1 Score: 148 bits (374), Expect = 3.840e-37
Identity = 88/201 (43.78%), Postives = 115/201 (57.21%), Query Frame = 0
Query:   10 GAAYCFLPLPVVTGLPVHVNGYFELSSNRRDIWSGSDMVGDGELRANWNKALVEELAASCYTRVLVAAKAALGGGGAYEALWPTGSTAEGSMWRGLADSLMRLVRPLPLLQTR--SAIAGGWVAPQKCVVWTGGGVNGGGEGN----ERELRALAEVLLAENVPLVEGS-KELRSLLLSSGCATFSTTPAFVRQLFRRLAS 203
            G AYCFLPLPV TGLPVHVNG+FELSSNRRDIW G DMVG+G+LRA WN+AL+ ++A  CY+R L  A    G G  Y++LWP      G  W  + D+    V PLPLL T       G W++P+  V+      +   +G       ++ +L ++L+ E+VP+V      L  +L          TPAFVR  FR  AS
Sbjct:  418 GLAYCFLPLPVATGLPVHVNGFFELSSNRRDIWWGDDMVGEGQLRAEWNRALLCDVAVPCYSRFLSLAAERCGAGALYDSLWPV--KGNGPAWVAMIDAFFEAVSPLPLLHTPLGEQEKGVWISPRDAVLIPSAEGSRNKDGTIIFCRDDISSLEKILVEEDVPVVHTYLTALHEVLEKRKVVARIATPAFVRTHFRTPAS 616          
BLAST of mRNA_E-fasciculatus_F_contig15837.4008.1 vs. uniprot
Match: A0A7S2VVU2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2VVU2_9STRA)

HSP 1 Score: 146 bits (369), Expect = 1.770e-36
Identity = 86/202 (42.57%), Postives = 113/202 (55.94%), Query Frame = 0
Query:    3 RLPPAPRGAAYCFLPLPVVTGLPVHVNGYFELSSNRRDIWSGSDMVGDGELRANWNKALVEELAASCYTRVLVAAKAALGGGGAYEALWPTGSTAE---GSMWRGLADSLMRLVRPLPLLQTRSAIAGGWVAPQKCVVWTGGGVNGGGEGNERELRALAEVLLAENVPLVEGSKE-LRSLLLSSGCATFSTTPAFVRQLFRR 200
            R PP P G AYCFLPLPV TGLPVHVNGYFELSSNRRD+W G DM GDG  RA WN AL+ ++AA CY+R++   K  +  G  YE L P     +   G +W  + D+    V   P+L + S     WV+P   V+            +  +   LA + L   +PLV    + LR  LL+   A ++TTP FVR+ ++R
Sbjct:    7 RPPPPPIGKAYCFLPLPVETGLPVHVNGYFELSSNRRDVWWGDDMAGDGRARAEWNLALIRDIAAVCYSRMVEKTKGKMREGRVYEELMPKVDEEKKPLGQLWEIMLDAFYSNVSNSPVLYSTSTSQ--WVSPSSSVL----------PSDPTDTTLLAILALEPTLPLVTFKDDALRKTLLNRNAAQYTTTPEFVREFYKR 196          
BLAST of mRNA_E-fasciculatus_F_contig15837.4008.1 vs. uniprot
Match: A0A2V0PDE2_9CHLO (RING-type domain-containing protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PDE2_9CHLO)

HSP 1 Score: 138 bits (348), Expect = 1.150e-33
Identity = 87/188 (46.28%), Postives = 106/188 (56.38%), Query Frame = 0
Query:   10 GAAYCFLPLPVVTGLPVHVNGYFELSSNRRDIWSGSDMVGDGELRANWNKALVEELAASCYTRVLVAAKAALGGGGAYEALWPTGSTAEGSMWRGLADSLMRLVRPLPLLQTRSAIAGGWVAPQKCVVWTGGGVNGGGEGNERELRALAEVLLAENVPLVEGSKELRSLLLS-SGCATFSTTPAFVRQ 196
            G A+CFLPLPV TGLPV VNGYFELSSNRRD+W G DM G G  RA WN+AL+  +AA  Y  +L AA   LG G  Y ALWP  S A  + W+ + + L RL    PL+  R+A A  W+AP  CV +  G   GG EG+      L E LLA  V L +    +   + +  G      TPA  RQ
Sbjct:  385 GRAFCFLPLPVSTGLPVAVNGYFELSSNRRDVWHGGDMAGAGAARARWNEALLRLVAAPAYAALLAAAARELGPGPQYGALWP--SAAASAPWQLVVEELYRLAARRPLVFCRAAGAARWMAPADCVFFPAGQRGGGEEGD-----GLVEGLLALGVALPDLPPAVVDTMQAYMGVKPALATPALARQ 565          
BLAST of mRNA_E-fasciculatus_F_contig15837.4008.1 vs. uniprot
Match: A0A7S0CTG0_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0CTG0_9EUKA)

HSP 1 Score: 129 bits (324), Expect = 1.150e-32
Identity = 69/129 (53.49%), Postives = 84/129 (65.12%), Query Frame = 0
Query:   10 GAAYCFLPLPVVTGLPVHVNGYFELSSNRRDIWSGSDMVGDGELRANWNKALVEELAASCYTRVLVAAKAALGGGGAYEALWPTGSTAEGSMWRGLADSLMRLVRPLPLLQTRSAIAGG-WVAPQKCVV 137
            G+A+CFLPLPV TGLPVHVNGYFELS+NRRDIW GSDM GDGE+R+ WN+ L+E++ AS Y  +L  A   LG    Y ALWP   T+E   WR LA  + R V   P+L  +     G W  P+  VV
Sbjct:  102 GSAFCFLPLPVRTGLPVHVNGYFELSANRRDIWWGSDMTGDGEMRSKWNRLLIEDVVASAYAHILYEASKILGYQKDYFALWPENPTSEA--WRVLAIEVYRKVLRFPVLYCQPVSREGYWCLPKDAVV 228          
BLAST of mRNA_E-fasciculatus_F_contig15837.4008.1 vs. uniprot
Match: A0A2K1K3C6_PHYPA (RING-type domain-containing protein n=3 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1K3C6_PHYPA)

HSP 1 Score: 134 bits (337), Expect = 3.360e-32
Identity = 77/162 (47.53%), Postives = 99/162 (61.11%), Query Frame = 0
Query:   10 GAAYCFLPLPVVTGLPVHVNGYFELSSNRRDIWSGSDMVGDGELRANWNKALVEELAASCYTRVLVAAKAALGGGGAYEALWPTGSTAEGSMWRGLADSLMRLV--RPLPLLQTRSAIAGGWVAPQKCVVWTGGGVNGGGEGNERELRALAEVLLAENVPLV 169
            G A+CFLPLPV  GLPVHVNGYFELSSNRRDIW G DM G G+LRA+WN+ L+E++AA  Y R+LV A   LG    + ALWPTGS  E   W  L   + + V    LP+L T +AI G WV+P++ V           + +  E R L + L    +P++
Sbjct: 1769 GRAFCFLPLPVKIGLPVHVNGYFELSSNRRDIWYGDDMAGGGKLRADWNRCLLEDVAAPAYARLLVEAARELGATAMFHALWPTGSVHE--PWYSLLKQVYKSVVELDLPVLYT-NAIQGKWVSPKRAVF---------PDNSFAEARELGDALAHAGLPII 1918          
BLAST of mRNA_E-fasciculatus_F_contig15837.4008.1 vs. uniprot
Match: A0A7S3QAL4_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QAL4_9STRA)

HSP 1 Score: 134 bits (337), Expect = 3.370e-32
Identity = 83/202 (41.09%), Postives = 117/202 (57.92%), Query Frame = 0
Query:   10 GAAYCFLPLPVVTGLPVHVNGYFELSSNRRDIWSGSDMVGDGELRANWNKALVEELAASCYTRVLVAA-KAALGGGGAYEALWPTGSTAEGSMWRGLADSLMRLVRPLPLLQTRSAIAGGWVAPQKCVVWTGGGVNGGGEGNERELRALAEVLLAENVPLVE-GSKELRSLLLSSGCATFSTTPAFVRQLFRRLASPAPGRL 209
            G AYCFLPLPV T LP+HVNGYFELSSNRRD+W G DM GDG+ RA WNK++V+++A   Y R++ AA +  L     +E L+P  S +    W  LA+  +  +R +P+L +  A    WVAP K ++            ++     L E+L  + +PLV   S EL++LLL     T +TTP  +R+ + R  + A G L
Sbjct:  365 GNAYCFLPLPVRTKLPIHVNGYFELSSNRRDVWWGDDMAGDGKARAEWNKSIVQDIAGPSYVRLVEAAIRNNLVSSITFELLFPQRSLS--GPWLVLANRFLNGIRDVPVLHSACASPQNWVAPSKSLLM-----------HDENDTKLIEILSKDKLPLVLIKSAELKALLLERKTCTNTTTPELLRRYYSRRKTIANGSL 553          
BLAST of mRNA_E-fasciculatus_F_contig15837.4008.1 vs. uniprot
Match: A0A0D2LK56_9CHLO (Sacsin n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2LK56_9CHLO)

HSP 1 Score: 133 bits (334), Expect = 8.310e-32
Identity = 69/127 (54.33%), Postives = 83/127 (65.35%), Query Frame = 0
Query:   10 GAAYCFLPLPVVTGLPVHVNGYFELSSNRRDIWSGSDMVGDGELRANWNKALVEELAASCYTRVLVAAKAALGGGGAYEALWPTGSTAEGSMWRGLADSLMRLVRPLPLLQTRSAIAGGWVAPQKCV 136
            G A+CFLPLPV TGLPV VNGYFELSSNRRD+W G DM G G  RA WN+AL+  +AA  Y  +L A    LG G AY ALWP+   A  + W+ +   L RL    PL+ +R+A AG W+AP  CV
Sbjct:  368 GRAFCFLPLPVATGLPVAVNGYFELSSNRRDVWHGEDMAGAGAARARWNEALLRLVAAPAYASLLAAVAQKLGPGAAYNALWPSFDAA--APWQAVVLELSRLAARRPLVWSRAAGAGRWMAPADCV 492          
BLAST of mRNA_E-fasciculatus_F_contig15837.4008.1 vs. uniprot
Match: A0A7S1TYE3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TYE3_9STRA)

HSP 1 Score: 131 bits (330), Expect = 2.850e-31
Identity = 81/197 (41.12%), Postives = 104/197 (52.79%), Query Frame = 0
Query:   10 GAAYCFLPLPVVTGLPVHVNGYFELSSNRRDIWSGSDMVGDGELRANWNKALVEELAASCYTRVLVAAKAALGGGGAYEALWPTGSTAE--GSMWRGLADSLMRLVRPLPLLQTRSAIAG-GWVAPQKCVVWTGGGVNGGGEGNERELRALAEV----LLAENVPLVEGSKELRSLLLSSGCATFSTTPAFVRQLFR 199
            G A+CFLPLPVVT LPVHVNGYFELSSNRRDIW G D+ G+G  RA WN+AL+    A CY ++LV A   LG   AY  LWP    A+     W  L  ++    R    +      A  G V P+ CV+ T   V    +  E+    + +V    L    VPL      LR+ L+ +GC     +PAF+R L +
Sbjct: 2078 GRAFCFLPLPVVTNLPVHVNGYFELSSNRRDIWYGEDLAGEGRRRAIWNEALLRHAIAPCYAKLLVGALRHLGPQSAYYELWPVEGRAKTRAQTWDMLRSAVFVAARQQDTIWGGVGGASHGAVKPEACVITTDSSVYDASDPREQARITVQDVVNRTLERAQVPLARVPPALRAALVEAGCCADEASPAFMRNLLK 2274          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15837.4008.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K4B9_9PHAE3.000e-12482.56UBA domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835YL62_9STRA5.060e-4150.54RING-type domain-containing protein n=1 Tax=Tribon... [more]
W7U1E4_9STRA3.840e-3743.78Ubiquitin-associated/translation elongation factor... [more]
A0A7S2VVU2_9STRA1.770e-3642.57Hypothetical protein (Fragment) n=1 Tax=Triparma p... [more]
A0A2V0PDE2_9CHLO1.150e-3346.28RING-type domain-containing protein n=1 Tax=Raphid... [more]
A0A7S0CTG0_9EUKA1.150e-3253.49Hypothetical protein (Fragment) n=1 Tax=Amorphochl... [more]
A0A2K1K3C6_PHYPA3.360e-3247.53RING-type domain-containing protein n=3 Tax=Physco... [more]
A0A7S3QAL4_9STRA3.370e-3241.09Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A0D2LK56_9CHLO8.310e-3254.33Sacsin n=1 Tax=Monoraphidium neglectum TaxID=14538... [more]
A0A7S1TYE3_9STRA2.850e-3141.12Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR15600FAMILY NOT NAMEDcoord: 8..203
NoneNo IPR availablePANTHERPTHR15600:SF42coord: 8..203

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig15837contigE-fasciculatus_F_contig15837:50..1922 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig15837.4008.1mRNA_E-fasciculatus_F_contig15837.4008.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig15837 50..1923 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig15837.4008.1 ID=prot_E-fasciculatus_F_contig15837.4008.1|Name=mRNA_E-fasciculatus_F_contig15837.4008.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=240bp
SKRLPPAPRGAAYCFLPLPVVTGLPVHVNGYFELSSNRRDIWSGSDMVGD
GELRANWNKALVEELAASCYTRVLVAAKAALGGGGAYEALWPTGSTAEGS
MWRGLADSLMRLVRPLPLLQTRSAIAGGWVAPQKCVVWTGGGVNGGGEGN
ERELRALAEVLLAENVPLVEGSKELRSLLLSSGCATFSTTPAFVRQLFRR
LASPAPGRLAARGVGSGAVGANGTASLRSGNPSARSTCIL
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