prot_E-fasciculatus_F_contig1572.3951.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1572.3951.1
Unique Nameprot_E-fasciculatus_F_contig1572.3951.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length159
Homology
BLAST of mRNA_E-fasciculatus_F_contig1572.3951.1 vs. uniprot
Match: D8LC02_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC02_ECTSI)

HSP 1 Score: 184 bits (466), Expect = 1.350e-57
Identity = 98/102 (96.08%), Postives = 101/102 (99.02%), Query Frame = 0
Query:   57 MVDQDIIYGGLVAVAGLAVGAGMVALTERAGVRSEERGAVSYERKMKMQAMFMEDDVVETTDVDDVRYNMRKALRANQTEEELLALTADARKRAEEEADDGW 158
            MV+QDIIYGGLVAVAGLAVGAGMVALTE+AGVRSEERGA+SYERKMKMQAMFMEDDVVE TDVDDVRYNMRKALRANQTEEELLALTADARKRAEEEADDGW
Sbjct:    1 MVEQDIIYGGLVAVAGLAVGAGMVALTEQAGVRSEERGALSYERKMKMQAMFMEDDVVEETDVDDVRYNMRKALRANQTEEELLALTADARKRAEEEADDGW 102          
BLAST of mRNA_E-fasciculatus_F_contig1572.3951.1 vs. uniprot
Match: K0TE04_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TE04_THAOC)

HSP 1 Score: 68.6 bits (166), Expect = 1.250e-11
Identity = 47/113 (41.59%), Postives = 67/113 (59.29%), Query Frame = 0
Query:   49 RHARSSLTMVDQDIIYGGLVAVAGLAVGAGMVALTERAGVRSEERGA-VSYERKMKMQAMFMEDDVVETT-DVDDVRYNMRKAL-RANQTEEELLALTADARKRAEEEADDGW 158
            R  RSSL+MVD +II GG +AV G+  G G+VA  E  G RS+ERG  +S +   ++    MED  V++  D+  +   +  AL  +   E+E L L+ + +KR  EEADDGW
Sbjct:   44 RRPRSSLSMVDTNIILGGGIAVGGVVAGIGLVAFAENMGERSKERGGGLSDDMATRITGGLMEDVEVDSVGDLSSLTDKLEAALMESGGAEQEQLQLSEEDKKRIAEEADDGW 156          
BLAST of mRNA_E-fasciculatus_F_contig1572.3951.1 vs. uniprot
Match: A0A7S4ECZ2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4ECZ2_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 4.660e-11
Identity = 49/114 (42.98%), Postives = 63/114 (55.26%), Query Frame = 0
Query:   48 RRHARSS-LTMVDQDIIYGGLVAVAGLAVGAGMVALTERAGVRSEERG--AVSYERKMKMQAMFMEDDVVETTDVDDVRYNMRKALRANQTEEELLALTADARKRAEEEADDGW 158
            RR A SS L M+D  +I GG  AV GLAVG GM   +E+   + E+RG  AVS   + KM AMFMED+V+  T +DD    M  AL A + E    A+     ++     DDGW
Sbjct:   44 RRQASSSQLQMLDAAVIQGGAAAVGGLAVGLGMAWFSEQQVEQGEQRGSDAVSEATRAKMSAMFMEDEVLPDTTLDDTVSRMEAALAAAKGE---AAVEEKVEEKPASSIDDGW 154          
BLAST of mRNA_E-fasciculatus_F_contig1572.3951.1 vs. uniprot
Match: A0A1Z5KBT4_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KBT4_FISSO)

HSP 1 Score: 64.7 bits (156), Expect = 2.580e-10
Identity = 43/110 (39.09%), Postives = 65/110 (59.09%), Query Frame = 0
Query:   53 SSLTMVDQDIIYGGLVAVAGLAVGAGMVALTERAGVRSEERGA-VSYERKMKMQAMFMEDDVVETTDVDDV---RYNMRKALRANQTEEELLALTADARKRAEEEADDGW 158
            +SL MVDQ+++ G  V V GLA G G+VA TE+ G R++ERG  +S     ++    +ED  VE + VDD+      +  ALR      E   ++ +A+++A E+ADDGW
Sbjct:   32 TSLQMVDQNVLLGAAVGVGGLAFGIGLVAFTEQQGERAKERGGGLSESMSTRIAGGLLED--VEVSSVDDLGSLTAQLENALRQTGKTGESFEVSEEAKRKALEDADDGW 139          
BLAST of mRNA_E-fasciculatus_F_contig1572.3951.1 vs. uniprot
Match: B7FYG2_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FYG2_PHATC)

HSP 1 Score: 60.8 bits (146), Expect = 9.270e-9
Identity = 42/114 (36.84%), Postives = 67/114 (58.77%), Query Frame = 0
Query:   51 ARSSLTM---VDQDIIYGGLVAVAGLAVGAGMVALTERAGVRSEERGA-VSYERKMKMQAMFMED-DVVETTDVDDVRYNMRKALR-ANQTEEELLALTADARKRAEEEADDGW 158
            AR SL +   +DQ ++ G  + VAGLA G G+VA TE  G R++ERG  +S     ++    +ED +V    D+  +   + KALR +   ++E+  +T + +KR ++EADDGW
Sbjct:   36 ARPSLALNLELDQQVLQGIGIGVAGLAAGVGLVAFTEAQGERAKERGGGLSEGMSTRITGGLLEDVEVSSVEDLGSLTSQLEKALRESGGAKDEVFEMTEEEKKRIQDEADDGW 149          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1572.3951.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LC02_ECTSI1.350e-5796.08Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
K0TE04_THAOC1.250e-1141.59Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S4ECZ2_9STRA4.660e-1142.98Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A1Z5KBT4_FISSO2.580e-1039.09Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
B7FYG2_PHATC9.270e-936.84Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 133..153
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..13
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 62..83
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 84..158
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..61
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..16
score: 0.84
NoneNo IPR availableTMHMMTMhelixcoord: 62..84
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1572contigE-fasciculatus_F_contig1572:13869..16279 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1572.3951.1mRNA_E-fasciculatus_F_contig1572.3951.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1572 13158..17110 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1572.3951.1 ID=prot_E-fasciculatus_F_contig1572.3951.1|Name=mRNA_E-fasciculatus_F_contig1572.3951.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=159bp
MRSIGALLFFLPFTSAFLAPTASLLRSSGRATSPFVGGVQASSQQQQRRH
ARSSLTMVDQDIIYGGLVAVAGLAVGAGMVALTERAGVRSEERGAVSYER
KMKMQAMFMEDDVVETTDVDDVRYNMRKALRANQTEEELLALTADARKRA
EEEADDGW*
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