prot_E-fasciculatus_F_contig15675.3931.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig15675.3931.1
Unique Nameprot_E-fasciculatus_F_contig15675.3931.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length137
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig15675.3931.1 vs. uniprot
Match: A0A835ZFY4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFY4_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 2.920e-12
Identity = 48/133 (36.09%), Postives = 68/133 (51.13%), Query Frame = 0 
Query:    5 VYIASLPSRGTLHGVDGYVIDHVPHFVPYDGGYPVRYRPENDEFSGPLDLYTSFSYNAVDGVTGETSVVPGVVEIHVLPKNDPPVPGNFSARIQTG-ETLIVLSGTDVDSAGGDAIVGFLVVELPRHGVLYQV 136
            +++ASLPSRGTL+ + G  +      +       +RYRP  D+FS     Y +F Y A DGVTG  S     V I V  ++DPPV    +  +     T I  +GTDVD+  GD++  + +   P  G LY V
Sbjct:  385 LWLASLPSRGTLYTLAGAAVTSAATQI---ANATLRYRPARDQFSAGGAAYATFRYVAADGVTGARSAE-ATVTIFVTAQDDPPVVVARAVTVAAAVATKICGNGTDVDA--GDSVRNYYISTAPSSGKLYYV 511
[Close]
BLAST of mRNA_E-fasciculatus_F_contig15675.3931.1 vs. uniprot
Match: A0A7S2S457_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S457_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 3.500e-10
Identity = 48/132 (36.36%), Postives = 66/132 (50.00%), Query Frame = 0 
Query:    7 IASLPSRGTLH-GVDGYVIDHVPHFVP-YDGGYPVRYRPENDEFSGPLDLYTSFSYNAVDGVTGETSVVPGVVEIHVLPKNDPPVPGNFSA-RIQTGETLIVLSGTDVDSAGGDAIVGFLVVELPRHGVLYQ 135
            + +LP +GTL+    G  +      +P  +G Y +RYRP  D     LD   +FSY A+DGVTG  S     V + V P NDPP   N S     +  T +  + +DVD +   AI    +  LPR+GVL Q
Sbjct:    9 LQTLPLQGTLYIPATGAAVTAAGTEIPEVNGTYALRYRPPKDASGLALD---TFSYYAMDGVTGVRSAQTRTVTLDVRPCNDPPRAFNVSLWAFSSTRTTVEFNTSDVDDS---AIAAAYITRLPRNGVLLQ 134
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15675.3931.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A835ZFY4_9STRA2.920e-1236.09Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2S457_9STRA3.500e-1036.36Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig15675contigE-fasciculatus_F_contig15675:2126..2536 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig15675.3931.1mRNA_E-fasciculatus_F_contig15675.3931.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig15675 2126..2536 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig15675.3931.1 ID=prot_E-fasciculatus_F_contig15675.3931.1|Name=mRNA_E-fasciculatus_F_contig15675.3931.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=137bp
MLSDVYIASLPSRGTLHGVDGYVIDHVPHFVPYDGGYPVRYRPENDEFSG
PLDLYTSFSYNAVDGVTGETSVVPGVVEIHVLPKNDPPVPGNFSARIQTG
ETLIVLSGTDVDSAGGDAIVGFLVVELPRHGVLYQVS
back to top