prot_E-fasciculatus_F_contig15660.3926.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig15660.3926.1
Unique Nameprot_E-fasciculatus_F_contig15660.3926.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length282
Homology
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BLAST of mRNA_E-fasciculatus_F_contig15660.3926.1 vs. uniprot
Match: A0A6H5KP85_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP85_9PHAE)

HSP 1 Score: 117 bits (293), Expect = 1.200e-28
Identity = 68/81 (83.95%), Postives = 70/81 (86.42%), Query Frame = 0 
Query:  168 ATSVGSNS-----VVGGTVAKPAEMTTSPDEDPTAAAHGFLAEFLDMSEEELRQLSAKYQSLPPGRRGPDEITVAGPELAA 243
            ATS GS+S     VVGGTVA+ AE T SP EDPTAAAHGFL EFLDMSEEELRQLSAKYQSLPPGRRGPDEITVAGPELAA
Sbjct:    2 ATSAGSSSSTSISVVGGTVAERAE-TNSPYEDPTAAAHGFLTEFLDMSEEELRQLSAKYQSLPPGRRGPDEITVAGPELAA 81
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BLAST of mRNA_E-fasciculatus_F_contig15660.3926.1 vs. uniprot
Match: D7G2F0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2F0_ECTSI)

HSP 1 Score: 70.9 bits (172), Expect = 2.330e-10
Identity = 35/35 (100.00%), Postives = 35/35 (100.00%), Query Frame = 0 
Query:  209 MSEEELRQLSAKYQSLPPGRRGPDEITVAGPELAA 243
            MSEEELRQLSAKYQSLPPGRRGPDEITVAGPELAA
Sbjct:    1 MSEEELRQLSAKYQSLPPGRRGPDEITVAGPELAA 35
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15660.3926.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KP85_9PHAE1.200e-2883.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2F0_ECTSI2.330e-10100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..282
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig15660contigE-fasciculatus_F_contig15660:17..1565 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig15660.3926.1mRNA_E-fasciculatus_F_contig15660.3926.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig15660 17..1703 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig15660.3926.1 ID=prot_E-fasciculatus_F_contig15660.3926.1|Name=mRNA_E-fasciculatus_F_contig15660.3926.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=282bp
MRPLCVLLLGGTYHPRVSSFLPPPAPSIPSSVVLNPPQQQQHPLRREARC
APSPRGASRRIRHRSGGSSSSTAAAGCWCGNAQGDTTRRKPTSPPAAFGR
RAVASVPRLRRAVRPSASQVEYAPLPPQSVACSAAAGDIIIQRASSRSSS
SSRRRRTSSSSSTIGATATSVGSNSVVGGTVAKPAEMTTSPDEDPTAAAH
GFLAEFLDMSEEELRQLSAKYQSLPPGRRGPDEITVAGPELAAAAAKAAE
EAAAAVIVASAGPPSLASGRGGEQRSAHGVGA
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