prot_E-fasciculatus_F_contig1563.3905.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1563.3905.1
Unique Nameprot_E-fasciculatus_F_contig1563.3905.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length179
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1563.3905.1 vs. uniprot
Match: D8LTG5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTG5_ECTSI)

HSP 1 Score: 296 bits (759), Expect = 6.280e-101
Identity = 155/179 (86.59%), Postives = 157/179 (87.71%), Query Frame = 0 
Query:    1 MHSVIRIARREQPPKDPPAGHVTKDGSERLFDNRVSEALLHRGNNLDQQASLLAQAMDVHQAVAPLLWICLVCLIDLHALEARVSDIFIINAGCQVLHRCIRINARHTAVVEQGCRAIAVMSEPSFTSRTRFMVEKIQDAIHEARPTPDTSTMSHKLVGDRTNYLLGRVLKLLPSPPRP 179
            MHSVIRIARREQ PKDPPAGHVTKDG ERL DNRVSEAL HRGN LDQQASLLAQ MDVHQAVAPLLWICLVCLIDLHALEARVSDIFIINAGCQVLHRCIRINARHTAVVEQ CR +AVMSEPSFTSRTRFMVE IQDAIHE           HKLVGDRTNY+LGRVLKLLP PP P
Sbjct:    1 MHSVIRIARREQSPKDPPAGHVTKDGPERLSDNRVSEAL-HRGNKLDQQASLLAQVMDVHQAVAPLLWICLVCLIDLHALEARVSDIFIINAGCQVLHRCIRINARHTAVVEQVCRVVAVMSEPSFTSRTRFMVENIQDAIHE-----------HKLVGDRTNYVLGRVLKLLPLPPPP 167
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1563.3905.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LTG5_ECTSI6.280e-10186.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1563contigE-fasciculatus_F_contig1563:1180..2164 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1563.3905.1mRNA_E-fasciculatus_F_contig1563.3905.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1563 1180..2164 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1563.3905.1 ID=prot_E-fasciculatus_F_contig1563.3905.1|Name=mRNA_E-fasciculatus_F_contig1563.3905.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=179bp
MHSVIRIARREQPPKDPPAGHVTKDGSERLFDNRVSEALLHRGNNLDQQA
SLLAQAMDVHQAVAPLLWICLVCLIDLHALEARVSDIFIINAGCQVLHRC
IRINARHTAVVEQGCRAIAVMSEPSFTSRTRFMVEKIQDAIHEARPTPDT
STMSHKLVGDRTNYLLGRVLKLLPSPPRP
back to top