prot_E-fasciculatus_F_contig15448.3817.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig15448.3817.1
Unique Nameprot_E-fasciculatus_F_contig15448.3817.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length425
Homology
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BLAST of mRNA_E-fasciculatus_F_contig15448.3817.1 vs. uniprot
Match: A0A6H5KLP2_9PHAE (J domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KLP2_9PHAE)

HSP 1 Score: 614 bits (1583), Expect = 9.580e-217
Identity = 364/427 (85.25%), Postives = 378/427 (88.52%), Query Frame = 0 
Query:    1 MGKRQRELRVELERREKEAASGSSFSSPSSRAGGLGAGGEARVAAARLDELRKKGEAERQRQSADWSVKSANAKXXXXXXXSAPSSGLSGANGXXXG-DDDGLEERTVRVKWKTKKESHSDYTLDVLFSKFGVVQSVSIEEGKGDRALVVFASAMSADAAMAAYGGREGGSETMRTSYVGKRRAKRSAFAPRRHTMSPRIPTGDGQAEGLSSFRDHESITMMNLRKEAERQALIRKMAEEEGLAVGNGKKNAAAENGAVTSTTEVGSGVEGEYQSEVSPSDSSVGSKTAGIVTTPNASQKGEVHAVGSAAGEAS---PGIGRSGSEAAGGSVRAGNRPAFPVPPSMAASEMPATSDLKARRKSDALLSAVSGGSSAGVEKRPPVPAGIGAFGIGSKSVPTTPVSRRSMVGTPIDESDILARMMAMKR 423
            MGKRQRELRVELERREKEAASGSSFSSPSSRAGGLGAGG ARVAAARLDELRKKGEAERQRQSADWSVKSA  K       SAPSSGLSGANG     DDDGLEERT+RVKWK KKESHSDYTLDVLFSKFGVVQSVSIEEG G+RA+VVFASA+SADAAMAAYG REGGSETMRTSYVGKRRAKRSAFAPRRHTMSPRIPTGDGQAEGLSSFRDHESITMM+LRKEAERQALIRKMAEEEGLAVG+G+K+AAA NGA TST EV SG EGE+QSEVSPSDS VGSKTAG V +P ASQ+GE HAVGSA  EAS    GIG SGSEAAGGSVRAGN PAFPV PSM+A +MPATSD KARRKSDALLSA+ GGS  GV   P VPAGIGAF IGSKSVPTTPVSRRSM GTPIDESDILARMM MKR
Sbjct:   95 MGKRQRELRVELERREKEAASGSSFSSPSSRAGGLGAGGAARVAAARLDELRKKGEAERQRQSADWSVKSAKVKSASARKRSAPSSGLSGANGGGGVFDDDGLEERTLRVKWKNKKESHSDYTLDVLFSKFGVVQSVSIEEGTGNRAMVVFASAVSADAAMAAYGSREGGSETMRTSYVGKRRAKRSAFAPRRHTMSPRIPTGDGQAEGLSSFRDHESITMMHLRKEAERQALIRKMAEEEGLAVGDGQKDAAAGNGAATSTMEVTSGGEGEHQSEVSPSDSGVGSKTAGNVASPKASQRGEAHAVGSAGDEASLGIGGIGASGSEAAGGSVRAGNTPAFPVSPSMSARKMPATSDFKARRKSDALLSAMGGGS--GVRPSP-VPAGIGAFVIGSKSVPTTPVSRRSMAGTPIDESDILARMMTMKR 518
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BLAST of mRNA_E-fasciculatus_F_contig15448.3817.1 vs. uniprot
Match: A0A7S2E6Q6_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2E6Q6_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 8.040e-7
Identity = 49/137 (35.77%), Postives = 77/137 (56.20%), Query Frame = 0 
Query:  107 VRVKWKTKKESHSDYTLDVLFSK-FGVVQSVSIEEGKGDRALVVFASAMSADAAMAAYGGREGGSETMRTSYVGKRRAKRSAFAPRRHTMSPRIPTGDGQAEGLSSFRDHESITMMNLRKEAERQALIRKMAEEEGL 242
            +R+KWK+KK SHS+ ++  L SK FG V+ V +   KG+ ALV FA+A S    +  Y      S++MR ++VG R+ +    + R+     R     G A   ++ RD E++    LR+ AER+ + R+M  EEG+
Sbjct:   98 IRLKWKSKKISHSEESIAQLLSKKFGRVEDVELLGVKGNAALVTFANASSCLPCVEEYLD----SDSMRATFVGSRKKEELRKSFRKSGEGDREMMDTGTAT-TTTHRDSETLEERKLRQAAEREKISRQM--EEGI 227
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15448.3817.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KLP2_9PHAE9.580e-21785.25J domain-containing protein n=2 Tax=Ectocarpus Tax... [more]
A0A7S2E6Q6_9STRA8.040e-735.77Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 220..240
NoneNo IPR availablePANTHERPTHR44313FAMILY NOT NAMEDcoord: 1..240
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 96..187
e-value: 1.2E-9
score: 39.8
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 119..192

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig15448contigE-fasciculatus_F_contig15448:1398..2672 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig15448.3817.1mRNA_E-fasciculatus_F_contig15448.3817.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig15448 1398..2690 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig15448.3817.1 ID=prot_E-fasciculatus_F_contig15448.3817.1|Name=mRNA_E-fasciculatus_F_contig15448.3817.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=425bp
MGKRQRELRVELERREKEAASGSSFSSPSSRAGGLGAGGEARVAAARLDE
LRKKGEAERQRQSADWSVKSANAKSASARKRSAPSSGLSGANGGGDGDDD
GLEERTVRVKWKTKKESHSDYTLDVLFSKFGVVQSVSIEEGKGDRALVVF
ASAMSADAAMAAYGGREGGSETMRTSYVGKRRAKRSAFAPRRHTMSPRIP
TGDGQAEGLSSFRDHESITMMNLRKEAERQALIRKMAEEEGLAVGNGKKN
AAAENGAVTSTTEVGSGVEGEYQSEVSPSDSSVGSKTAGIVTTPNASQKG
EVHAVGSAAGEASPGIGRSGSEAAGGSVRAGNRPAFPVPPSMAASEMPAT
SDLKARRKSDALLSAVSGGSSAGVEKRPPVPAGIGAFGIGSKSVPTTPVS
RRSMVGTPIDESDILARMMAMKRS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035979RBD_domain_sf
IPR012677Nucleotide-bd_a/b_plait_sf