prot_E-fasciculatus_F_contig1538.3777.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1538.3777.1
Unique Nameprot_E-fasciculatus_F_contig1538.3777.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length209
Homology
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BLAST of mRNA_E-fasciculatus_F_contig1538.3777.1 vs. uniprot
Match: D7FIM1_ECTSI (Ubiquitinyl hydrolase 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIM1_ECTSI)

HSP 1 Score: 171 bits (433), Expect = 1.440e-45
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 0 
Query:  134 MDGEGMGHPDSLCNECDEHTLHEPDDVLTCLECGYTACGSPPRRHMLRHCLTQPGDGHCFAASRERAEIFCARCCD 209
            MDG+GMGHP S+C+ECDEHTLHEPDDVLTCLECGYTACGSPPRRHMLRHCLTQPGDGHCFAASRERAEIFCARCCD
Sbjct:    1 MDGDGMGHPASMCHECDEHTLHEPDDVLTCLECGYTACGSPPRRHMLRHCLTQPGDGHCFAASRERAEIFCARCCD 76
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1538.3777.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FIM1_ECTSI1.440e-4594.74Ubiquitinyl hydrolase 1 n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 88..209
e-value: 2.0E-9
score: 39.3
IPR001607Zinc finger, UBP-typePFAMPF02148zf-UBPcoord: 146..208
e-value: 1.0E-6
score: 29.0
IPR001607Zinc finger, UBP-typePROSITEPS50271ZF_UBPcoord: 144..209
score: 11.531
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 41..209
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 36..40
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..40
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 24..35
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 90..207

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1538contigE-fasciculatus_F_contig1538:1456..4587 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1538.3777.1mRNA_E-fasciculatus_F_contig1538.3777.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1538 1456..4734 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1538.3777.1 ID=prot_E-fasciculatus_F_contig1538.3777.1|Name=mRNA_E-fasciculatus_F_contig1538.3777.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=209bp
MVKTAPGKATPTTPKAVGSAGRSAGAAAAAAAAAAAAAAAESLRTSTAAA
PPNSRTSGSSGNHAGAASARTVAGGAATGSSAGSEPSKMTCTCPHLVDHP
NRQDLLRKLVDVRIEVNTALILKEKKTVGVFGAMDGEGMGHPDSLCNECD
EHTLHEPDDVLTCLECGYTACGSPPRRHMLRHCLTQPGDGHCFAASRERA
EIFCARCCD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001607Znf_UBP
IPR013083Znf_RING/FYVE/PHD