prot_E-fasciculatus_F_contig15230.3698.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig15230.3698.1
Unique Nameprot_E-fasciculatus_F_contig15230.3698.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length65
Homology
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BLAST of mRNA_E-fasciculatus_F_contig15230.3698.1 vs. uniprot
Match: D7G924_ECTSI (UPF0020 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G924_ECTSI)

HSP 1 Score: 65.5 bits (158), Expect = 7.090e-11
Identity = 34/64 (53.12%), Postives = 39/64 (60.94%), Query Frame = 0 
Query:   10 RCVLLHGLFEVWGHGRNREDAVRDAFKCPR--------------TRPGSDSSRKEEREGVLYLP 59
            RCVLLHGLFEVWGHGRNREDA+RDAFK  R              TR G  +  KEE++ +   P
Sbjct:   94 RCVLLHGLFEVWGHGRNREDAIRDAFKSGRFLQHAGNASWSLGVTRYGRSNLNKEEQQALAGGP 157
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15230.3698.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G924_ECTSI7.090e-1153.13UPF0020 domain-containing protein n=1 Tax=Ectocarp... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig15230contigE-fasciculatus_F_contig15230:1103..2706 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig15230.3698.1mRNA_E-fasciculatus_F_contig15230.3698.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig15230 1103..2706 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig15230.3698.1 ID=prot_E-fasciculatus_F_contig15230.3698.1|Name=mRNA_E-fasciculatus_F_contig15230.3698.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=65bp
MVSAVWHDIRCVLLHGLFEVWGHGRNREDAVRDAFKCPRTRPGSDSSRKE
EREGVLYLPRVATGG
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