prot_E-fasciculatus_F_contig152.3677.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig152.3677.1
Unique Nameprot_E-fasciculatus_F_contig152.3677.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length207
Homology
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BLAST of mRNA_E-fasciculatus_F_contig152.3677.1 vs. uniprot
Match: D7G499_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G499_ECTSI)

HSP 1 Score: 89.0 bits (219), Expect = 1.480e-19
Identity = 42/53 (79.25%), Postives = 46/53 (86.79%), Query Frame = 0 
Query:   95 DESLVMTVDVDHTKLVAWSNVGETYALAGVFDKPSGSGDLRGLMLHLGLPIVY 147
            + S +MTVD D+TKLVAWS V  TYALAGV+DKPS SGDLRGLMLHLGLPIVY
Sbjct:   34 NRSQIMTVDADYTKLVAWSKVDGTYALAGVYDKPSSSGDLRGLMLHLGLPIVY 86
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig152.3677.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G499_ECTSI1.480e-1979.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 36..206
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..35
NoneNo IPR availableTMHMMTMhelixcoord: 21..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig152contigE-fasciculatus_F_contig152:2064..6000 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig152.3677.1mRNA_E-fasciculatus_F_contig152.3677.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig152 2037..30761 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig152.3677.1 ID=prot_E-fasciculatus_F_contig152.3677.1|Name=mRNA_E-fasciculatus_F_contig152.3677.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=207bp
MRRKKQHNMHAATARCPVTTSFSAIICIQVVLLFWHGTLLVQGVSPSLRA
SHHLRSRSLQTSTCSLEVEQEVWANLSINSGTTTTNGHQIVVSQDESLVM
TVDVDHTKLVAWSNVGETYALAGVFDKPSGSGDLRGLMLHLGLPIVYTIN
TDKDAQTEEVFTYEFDSESVSLSVNGSVQLTSEFSNQADLIVDSAVSATG
TAGKHR*
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