prot_E-fasciculatus_F_contig15035.3569.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig15035.3569.1
Unique Nameprot_E-fasciculatus_F_contig15035.3569.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length53
Homology
BLAST of mRNA_E-fasciculatus_F_contig15035.3569.1 vs. uniprot
Match: A0A6H5JCM7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCM7_9PHAE)

HSP 1 Score: 100 bits (248), Expect = 2.050e-23
Identity = 47/51 (92.16%), Postives = 49/51 (96.08%), Query Frame = 0
Query:    2 GIVSALALITGQLVRRRAVGVDPEQPSQVYDFYMDLWKIFYLSYLFLPLAR 52
            G+VSALALITGQL+RRRA GVDPEQP QVYDFYMDLWKIFYLSYLFLPLAR
Sbjct:  436 GLVSALALITGQLMRRRAAGVDPEQPKQVYDFYMDLWKIFYLSYLFLPLAR 486          
BLAST of mRNA_E-fasciculatus_F_contig15035.3569.1 vs. uniprot
Match: D7FTE1_ECTSI (Tocopherol phytyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTE1_ECTSI)

HSP 1 Score: 96.7 bits (239), Expect = 1.800e-22
Identity = 44/52 (84.62%), Postives = 49/52 (94.23%), Query Frame = 0
Query:    1 RGIVSALALITGQLVRRRAVGVDPEQPSQVYDFYMDLWKIFYLSYLFLPLAR 52
            RG++SA+ALI GQLVRRRA GVDP+QP QVYDFYMDLWK+FYLSYLFLPLAR
Sbjct:  327 RGLMSAVALIAGQLVRRRAAGVDPKQPKQVYDFYMDLWKLFYLSYLFLPLAR 378          
BLAST of mRNA_E-fasciculatus_F_contig15035.3569.1 vs. uniprot
Match: A0A448ZLS0_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZLS0_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 3.790e-13
Identity = 33/52 (63.46%), Postives = 37/52 (71.15%), Query Frame = 0
Query:    1 RGIVSALALITGQLVRRRAVGVDPEQPSQVYDFYMDLWKIFYLSYLFLPLAR 52
            R +V A AL+ G  VRR A  VDP  P +VY FYM LWK+FYLSYLFLP AR
Sbjct:  379 RALVGAAALLAGASVRREASPVDPHNPREVYGFYMHLWKLFYLSYLFLPFAR 430          
BLAST of mRNA_E-fasciculatus_F_contig15035.3569.1 vs. uniprot
Match: A0A7S0ULR7_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0ULR7_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 1.940e-12
Identity = 30/52 (57.69%), Postives = 37/52 (71.15%), Query Frame = 0
Query:    1 RGIVSALALITGQLVRRRAVGVDPEQPSQVYDFYMDLWKIFYLSYLFLPLAR 52
            R +V   AL+ G  V++ A  VDPE P +VYD+YM LWK+FYLSY  LPLAR
Sbjct:  227 RAVVGISALLAGASVQKEAAPVDPENPKEVYDYYMHLWKLFYLSYFVLPLAR 278          
BLAST of mRNA_E-fasciculatus_F_contig15035.3569.1 vs. uniprot
Match: A0A1E7F9X4_9STRA (Homogentisate phytyltransferase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F9X4_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 7.940e-11
Identity = 29/52 (55.77%), Postives = 37/52 (71.15%), Query Frame = 0
Query:    1 RGIVSALALITGQLVRRRAVGVDPEQPSQVYDFYMDLWKIFYLSYLFLPLAR 52
            R IV   AL+ G  V++ A  VDP+ P++VY FYM LWK+FYLSY  LP+AR
Sbjct:  430 RIIVGISALVAGASVQKEAAPVDPDNPTEVYGFYMHLWKLFYLSYFVLPIAR 481          
BLAST of mRNA_E-fasciculatus_F_contig15035.3569.1 vs. uniprot
Match: A0A812LGI0_SYMPI (VTE4 protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812LGI0_SYMPI)

HSP 1 Score: 58.9 bits (141), Expect = 8.690e-9
Identity = 26/51 (50.98%), Postives = 39/51 (76.47%), Query Frame = 0
Query:    1 RGIVSALALITGQLVRRRAVGVDPEQPSQVYDFYMDLWKIFYLSYLFLPLA 51
            RG+++ ++L+  + ++R+   VD E+P QV+DFYM +WKIFYL YL LPLA
Sbjct:  622 RGVLAVISLLFCRSLQRKERLVDAEKPKQVFDFYMFVWKIFYLCYLLLPLA 672          
BLAST of mRNA_E-fasciculatus_F_contig15035.3569.1 vs. uniprot
Match: A0A7R9W9M6_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W9M6_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 1.600e-8
Identity = 28/52 (53.85%), Postives = 32/52 (61.54%), Query Frame = 0
Query:    1 RGIVSALALITGQLVRRRAVGVDPEQPSQVYDFYMDLWKIFYLSYLFLPLAR 52
            R  V   +   G  VR  A  VDPE   QVY++YM LWK+FYLSYL LP AR
Sbjct:  342 RAGVGLASFALGLSVREEAQPVDPEDSQQVYEYYMHLWKLFYLSYLVLPFAR 393          
BLAST of mRNA_E-fasciculatus_F_contig15035.3569.1 vs. uniprot
Match: A0A7S0KBA4_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus aporus TaxID=1398097 RepID=A0A7S0KBA4_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 1.040e-7
Identity = 27/52 (51.92%), Postives = 33/52 (63.46%), Query Frame = 0
Query:    1 RGIVSALALITGQLVRRRAVGVDPEQPSQVYDFYMDLWKIFYLSYLFLPLAR 52
            R IV   ++  G   R  +  V+PE  S+VYD+YM LWKIFYLSY  LP AR
Sbjct:  194 RMIVGLSSIYFGVKARENSRDVNPESSSEVYDYYMYLWKIFYLSYFSLPFAR 245          
BLAST of mRNA_E-fasciculatus_F_contig15035.3569.1 vs. uniprot
Match: A0A7S1E2L3_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1E2L3_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 2.390e-7
Identity = 24/52 (46.15%), Postives = 34/52 (65.38%), Query Frame = 0
Query:    1 RGIVSALALITGQLVRRRAVGVDPEQPSQVYDFYMDLWKIFYLSYLFLPLAR 52
            R  + A +L+ G  V ++A  V+PE    VY++YM LWK+FY+SYL LP  R
Sbjct:   92 RMALGAFSLMAGISVEKKANNVNPEDSGGVYEYYMYLWKLFYVSYLALPFVR 143          
BLAST of mRNA_E-fasciculatus_F_contig15035.3569.1 vs. uniprot
Match: A0A7S0CPH4_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0CPH4_9EUKA)

HSP 1 Score: 49.3 bits (116), Expect = 1.190e-5
Identity = 24/38 (63.16%), Postives = 27/38 (71.05%), Query Frame = 0
Query:   15 VRRRAVGVDPEQPSQVYDFYMDLWKIFYLSYLFLPLAR 52
            VRRR  GVD    S+ Y +YM LWK+FYLSY  LPLAR
Sbjct:  146 VRRR--GVDARNESEAYAYYMHLWKMFYLSYFALPLAR 181          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15035.3569.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A6H5JCM7_9PHAE2.050e-2392.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTE1_ECTSI1.800e-2284.62Tocopherol phytyltransferase n=1 Tax=Ectocarpus si... [more]
A0A448ZLS0_9STRA3.790e-1363.46Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S0ULR7_9STRA1.940e-1257.69Hypothetical protein n=1 Tax=Pseudo-nitzschia deli... [more]
A0A1E7F9X4_9STRA7.940e-1155.77Homogentisate phytyltransferase n=1 Tax=Fragilario... [more]
A0A812LGI0_SYMPI8.690e-950.98VTE4 protein n=1 Tax=Symbiodinium pilosum TaxID=29... [more]
A0A7R9W9M6_9STRA1.600e-853.85Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S0KBA4_9STRA1.040e-751.92Hypothetical protein n=1 Tax=Leptocylindrus aporus... [more]
A0A7S1E2L3_9STRA2.390e-746.15Hypothetical protein n=1 Tax=Thalassionema nitzsch... [more]
A0A7S0CPH4_9EUKA1.190e-563.16Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 52..52
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..32
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..17
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 33..51

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig15035contigE-fasciculatus_F_contig15035:104..262 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig15035.3569.1mRNA_E-fasciculatus_F_contig15035.3569.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig15035 104..262 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig15035.3569.1 ID=prot_E-fasciculatus_F_contig15035.3569.1|Name=mRNA_E-fasciculatus_F_contig15035.3569.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=53bp
RGIVSALALITGQLVRRRAVGVDPEQPSQVYDFYMDLWKIFYLSYLFLPL
AR*
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