prot_E-fasciculatus_F_contig15.3541.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig15.3541.1
Unique Nameprot_E-fasciculatus_F_contig15.3541.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length210
Homology
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BLAST of mRNA_E-fasciculatus_F_contig15.3541.1 vs. uniprot
Match: D8LTK8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTK8_ECTSI)

HSP 1 Score: 138 bits (347), Expect = 4.120e-36
Identity = 104/221 (47.06%), Postives = 130/221 (58.82%), Query Frame = 0 
Query:    1 MVESGLGTYYDDACVEDFDGYSGILGCNTGEVLQCRTCYLSTDLYMNATDTTAASLPSFTMCPCCIPTTLAE-HVDIQVRNF-FADYNISASDCTDSLTVTPVEAPATPLXXXXXXXXXXXXTPVPGESGDGA--LTTPEXXXXXXXXXXXXX------------PSDGAEPGSDTGNVDASETDVGLSMGAKVGIGAAAAVGVIFLGVVGYGTIKACRRG 205
            MVE G  TYYD  C       +G  GC T  + +CRTCYLST++YM+ T+ T AS P + MCPCC+P TL   H D++VR F ++ + ISASDCT + T TP+ +   P                     DGA  +TTP XXXXXXXXXXXXX            P+   + G D G  DAS+ + GLSMGAK+GIG AAA GVIFLG+VG+  IKA R+G
Sbjct:  127 MVEWGTSTYYDGTCE------AGTQGCYTDGIRECRTCYLSTEIYMDETNATEASRPPWAMCPCCVPATLESGHDDVEVRAFNYSVFTISASDCTITPTFTPLVSTEAPAAV------------------DGAQPVTTPTXXXXXXXXXXXXXXXXXXXXXVPSIPTPAPDGGVDEGGADASDKNDGLSMGAKIGIGVAAAAGVIFLGIVGFAAIKASRKG 323
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BLAST of mRNA_E-fasciculatus_F_contig15.3541.1 vs. uniprot
Match: A0A6H5KCT7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCT7_9PHAE)

HSP 1 Score: 127 bits (318), Expect = 7.220e-33
Identity = 107/233 (45.92%), Postives = 127/233 (54.51%), Query Frame = 0 
Query:    1 MVESGLGTYYDDACVEDFDGYSGILGCNTGEVLQCRTCYLSTDLYMNATDTTAASLPSFTMCPCCIPTTL-AEHVDIQVRNF-FADYNISASDCTDSLTVTPVEAPATPLXXXXXXXXXXXX--------------------------TPVPGESGDGAL-TTPEXXXXXXXXXXXXXPSDGAEPGSDTGNVDASETDVGLSMGAKVGIGAAAAVGVIFLGVVGYGTIKACRR 204
            MVESG  TYYDD C       +GI GC T  V +CRTCYLST++YM+AT+ T AS P + MCPCC+P TL ++H DI+V+ F ++ + ISASDCT + TV          XXXXXXXXXXXX                          TPVP  +G   + +TP               SDGA                GLSMGAKVGIGAAAAVGVIFLGVVG+  IKA  R
Sbjct:    1 MVESGTSTYYDDTCE------AGIQGCYTDGVRECRTCYLSTEIYMDATNATEASRPPWAMCPCCVPATLQSDHDDIEVKAFNYSVFGISASDCTITPTVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSGSRAMDTPVPSVAGSTYIPSTP--------IPTPGASSDGAXXXXXXXXXXXXXXXXGLSMGAKVGIGAAAAVGVIFLGVVGFRAIKASSR 219
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15.3541.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LTK8_ECTSI4.120e-3647.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KCT7_9PHAE7.220e-3345.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 178..199
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 200..209
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..177
NoneNo IPR availableTMHMMTMhelixcoord: 180..199

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig15contigE-fasciculatus_F_contig15:55722..60187 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig15.3541.1mRNA_E-fasciculatus_F_contig15.3541.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig15 53511..60433 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig15.3541.1 ID=prot_E-fasciculatus_F_contig15.3541.1|Name=mRNA_E-fasciculatus_F_contig15.3541.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=210bp
MVESGLGTYYDDACVEDFDGYSGILGCNTGEVLQCRTCYLSTDLYMNATD
TTAASLPSFTMCPCCIPTTLAEHVDIQVRNFFADYNISASDCTDSLTVTP
VEAPATPLPTPSPTPPPVDPTPVPGESGDGALTTPEPVAEPTPGPTTESP
SDGAEPGSDTGNVDASETDVGLSMGAKVGIGAAAAVGVIFLGVVGYGTIK
ACRRGRGVK*
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