prot_E-fasciculatus_F_contig1495.3514.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1495.3514.1
Unique Nameprot_E-fasciculatus_F_contig1495.3514.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length283
Homology
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BLAST of mRNA_E-fasciculatus_F_contig1495.3514.1 vs. uniprot
Match: D8LQG4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQG4_ECTSI)

HSP 1 Score: 339 bits (870), Expect = 8.140e-114
Identity = 233/293 (79.52%), Postives = 241/293 (82.25%), Query Frame = 0 
Query:    1 MRANSEHWRVSYPQRTPIPRRPPTRFDTRRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGVEVVSNKRAAGGPAADHGRAVRFDRVVKLILVPSRLDLSAGLSDELWWNEDDYLQFRLGAIVEGSSGVLGRTLRNKRSRRIQQPPAPARRTYQHGSKIAQALEKMDSHGGSTRPPIRRQFKVHLASSPSLRAQPVTPPPSPANPNESPT-----------EASGSSPRRKDQKGWSLAEGFDGLVGLGLLPGSVDP 282
            MRANSEHWRV YPQRTPIPRRP TRFD RR+            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX             GVE+VSNKRAAGGPAADHGRAVRFDRVVKLILVPSRLDLSAGLSDELWWNEDDYLQFRLGAIVEGSSGVLGRTLRNKRS+RIQ PPA AR TYQHG KIAQALE+MD HGGSTRPPIRRQFKVHL+SSPS R QPVTPPPSPAN NE+             +ASGSSPRRK  KGW+ AEGFDGLVGLGLLPGSVDP
Sbjct:   38 MRANSEHWRVRYPQRTPIPRRPSTRFDARRSAVGPAAARADSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGGT---------GVELVSNKRAAGGPAADHGRAVRFDRVVKLILVPSRLDLSAGLSDELWWNEDDYLQFRLGAIVEGSSGVLGRTLRNKRSKRIQ-PPAAARPTYQHG-KIAQALERMDGHGGSTRPPIRRQFKVHLSSSPSFRVQPVTPPPSPANANETSIGRGVADEMDHPDASGSSPRRKGHKGWTFAEGFDGLVGLGLLPGSVDP 319
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1495.3514.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LQG4_ECTSI8.140e-11479.52Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 43..49
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 31..42
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..49
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..30
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 50..282

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1495contigE-fasciculatus_F_contig1495:10539..12140 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1495.3514.1mRNA_E-fasciculatus_F_contig1495.3514.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1495 10082..13152 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1495.3514.1 ID=prot_E-fasciculatus_F_contig1495.3514.1|Name=mRNA_E-fasciculatus_F_contig1495.3514.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=283bp
MRANSEHWRVSYPQRTPIPRRPPTRFDTRRAAAGPTAAAAAAAAAAAAAA
NSPPTPVFDLRQPSSSRRLLLLPAGRRPDEHRGAHQAAAAAAAASRGVEV
VSNKRAAGGPAADHGRAVRFDRVVKLILVPSRLDLSAGLSDELWWNEDDY
LQFRLGAIVEGSSGVLGRTLRNKRSRRIQQPPAPARRTYQHGSKIAQALE
KMDSHGGSTRPPIRRQFKVHLASSPSLRAQPVTPPPSPANPNESPTEASG
SSPRRKDQKGWSLAEGFDGLVGLGLLPGSVDP*
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