prot_E-fasciculatus_F_contig14909.3493.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig14909.3493.1
Unique Nameprot_E-fasciculatus_F_contig14909.3493.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length128
Homology
BLAST of mRNA_E-fasciculatus_F_contig14909.3493.1 vs. uniprot
Match: D7FI13_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI13_ECTSI)

HSP 1 Score: 243 bits (621), Expect = 7.110e-76
Identity = 118/120 (98.33%), Postives = 119/120 (99.17%), Query Frame = 0
Query:    8 KQTACTTVKHLSLGVAMLGCEDALVHLLNFVWPNIFETSPHVINAVFEAIEGMSVALGVTRILQYVLQGLFHPARRVREVYWKLYNSLYILGADALTPAYPRLADDGNNAYRRTHLELFV 127
            +QTACTTVKHLSLGVAMLGCEDALVHLLNFVWPNIFETSPHVINAVFEAIEGMSVALGVTRILQYVLQGLFHPARRVREVYWKLYNSLYILGADALTPAYPRL DDGNNAYRRTHLELFV
Sbjct:  440 RQTACTTVKHLSLGVAMLGCEDALVHLLNFVWPNIFETSPHVINAVFEAIEGMSVALGVTRILQYVLQGLFHPARRVREVYWKLYNSLYILGADALTPAYPRLTDDGNNAYRRTHLELFV 559          
BLAST of mRNA_E-fasciculatus_F_contig14909.3493.1 vs. uniprot
Match: A0A6H5JJ74_9PHAE (TOG domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ74_9PHAE)

HSP 1 Score: 239 bits (610), Expect = 9.630e-71
Identity = 116/118 (98.31%), Postives = 116/118 (98.31%), Query Frame = 0
Query:   10 TACTTVKHLSLGVAMLGCEDALVHLLNFVWPNIFETSPHVINAVFEAIEGMSVALGVTRILQYVLQGLFHPARRVREVYWKLYNSLYILGADALTPAYPRLADDGNNAYRRTHLELFV 127
            TACTTVKHLSLGVAMLGCEDALVHLLNFVWPNIFETSPHVINAVFEAIEGMSVALGVTRILQYVLQGLFHPARRVREVYWKLYNSLYILGADALTPAYPRL DDGNN YRRTHLELFV
Sbjct: 1259 TACTTVKHLSLGVAMLGCEDALVHLLNFVWPNIFETSPHVINAVFEAIEGMSVALGVTRILQYVLQGLFHPARRVREVYWKLYNSLYILGADALTPAYPRLTDDGNNTYRRTHLELFV 1376          
BLAST of mRNA_E-fasciculatus_F_contig14909.3493.1 vs. uniprot
Match: A0A7S2XY64_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XY64_9STRA)

HSP 1 Score: 207 bits (527), Expect = 3.780e-64
Identity = 96/120 (80.00%), Postives = 108/120 (90.00%), Query Frame = 0
Query:    8 KQTACTTVKHLSLGVAMLGCEDALVHLLNFVWPNIFETSPHVINAVFEAIEGMSVALGVTRILQYVLQGLFHPARRVREVYWKLYNSLYILGADALTPAYPRLADDGNNAYRRTHLELFV 127
            +QTA TTVKH++LGVA LGCEDAL HLLNFVWPNIFE SPHVINAV EA+EG  VALG T+ILQYV+QGL+HPARRVR+VYWK+YN+LY+ GADALTPAYPRL DDG N YRRTHLELF+
Sbjct:  225 RQTASTTVKHIALGVAGLGCEDALTHLLNFVWPNIFENSPHVINAVMEAVEGCMVALGPTKILQYVMQGLYHPARRVRDVYWKIYNTLYMFGADALTPAYPRLEDDGLNTYRRTHLELFI 344          
BLAST of mRNA_E-fasciculatus_F_contig14909.3493.1 vs. uniprot
Match: A0A2P4YHC9_9STRA (Splicing factor 3B subunit 1 n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YHC9_9STRA)

HSP 1 Score: 201 bits (512), Expect = 3.780e-64
Identity = 97/120 (80.83%), Postives = 105/120 (87.50%), Query Frame = 0
Query:    8 KQTACTTVKHLSLGVAMLGCEDALVHLLNFVWPNIFETSPHVINAVFEAIEGMSVALGVTRILQYVLQGLFHPARRVREVYWKLYNSLYILGADALTPAYPRLADDGNNAYRRTHLELFV 127
            +QTACTTVKHL+LGVA LGCEDALVHLLNFVWPNIFETSPHVINAVFEA+EG  VALG   ILQYVLQGLFHPARRVREVYWK+YNSLY+   D LTPAYP L DDG N+Y RT+LEL +
Sbjct:   53 RQTACTTVKHLALGVAGLGCEDALVHLLNFVWPNIFETSPHVINAVFEAVEGCRVALGPHVILQYVLQGLFHPARRVREVYWKIYNSLYMYAQDGLTPAYPALDDDGVNSYNRTYLELCI 172          
BLAST of mRNA_E-fasciculatus_F_contig14909.3493.1 vs. uniprot
Match: A0A6V1S7R5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1S7R5_HETAK)

HSP 1 Score: 209 bits (532), Expect = 1.040e-60
Identity = 97/120 (80.83%), Postives = 109/120 (90.83%), Query Frame = 0
Query:    8 KQTACTTVKHLSLGVAMLGCEDALVHLLNFVWPNIFETSPHVINAVFEAIEGMSVALGVTRILQYVLQGLFHPARRVREVYWKLYNSLYILGADALTPAYPRLADDGNNAYRRTHLELFV 127
            +QT+CTTVKHL+LGVA LGCEDAL HLLN+VWPNIFE SPH+INA FEAI G +VALG TR+LQYVLQG++HPARRVR+VYWK+YNSLYI GADALTPAYPRL D+G N YRRTHLELFV
Sbjct:  776 RQTSCTTVKHLALGVAGLGCEDALTHLLNYVWPNIFEVSPHMINACFEAIGGCAVALGPTRVLQYVLQGMYHPARRVRDVYWKIYNSLYIYGADALTPAYPRLEDEGANTYRRTHLELFV 895          
BLAST of mRNA_E-fasciculatus_F_contig14909.3493.1 vs. uniprot
Match: A0A1Z9QC94_9BACT (TOG domain-containing protein n=1 Tax=Phycisphaeraceae bacterium TMED231 TaxID=1986831 RepID=A0A1Z9QC94_9BACT)

HSP 1 Score: 209 bits (532), Expect = 3.140e-60
Identity = 101/120 (84.17%), Postives = 109/120 (90.83%), Query Frame = 0
Query:    8 KQTACTTVKHLSLGVAMLGCEDALVHLLNFVWPNIFETSPHVINAVFEAIEGMSVALGVTRILQYVLQGLFHPARRVREVYWKLYNSLYILGADALTPAYPRLADDGNNAYRRTHLELFV 127
            +QTACTTVKHL+LGVA LGCEDA+ HLLNFVWPNIFETSPHVI AVFEAIEGM VALG  +ILQYVLQGL+HPARRVR+VYWKLYN++YI GADALT AYPRL DDG N YRRTHLELFV
Sbjct: 1154 RQTACTTVKHLALGVAGLGCEDAVSHLLNFVWPNIFETSPHVIAAVFEAIEGMIVALGPIKILQYVLQGLYHPARRVRDVYWKLYNTIYIYGADALTCAYPRLEDDGVNTYRRTHLELFV 1273          
BLAST of mRNA_E-fasciculatus_F_contig14909.3493.1 vs. uniprot
Match: A0A7S3GVU2_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GVU2_9STRA)

HSP 1 Score: 197 bits (501), Expect = 5.120e-59
Identity = 90/120 (75.00%), Postives = 103/120 (85.83%), Query Frame = 0
Query:    8 KQTACTTVKHLSLGVAMLGCEDALVHLLNFVWPNIFETSPHVINAVFEAIEGMSVALGVTRILQYVLQGLFHPARRVREVYWKLYNSLYILGADALTPAYPRLADDGNNAYRRTHLELFV 127
            +QTACTTVKH++LG   LGCEDAL+HLLNFVWPN+FE S HVINA  EA+E M VALG  ++ QYV+QGLFHPAR+VREVYWK+YNS+YI G DALTPAYPRL DDG N YRRTHLELF+
Sbjct:  337 RQTACTTVKHIALGTVGLGCEDALLHLLNFVWPNLFEESAHVINACMEAVEAMIVALGPAKLFQYVMQGLFHPARKVREVYWKIYNSMYIYGQDALTPAYPRLEDDGVNNYRRTHLELFI 456          
BLAST of mRNA_E-fasciculatus_F_contig14909.3493.1 vs. uniprot
Match: A0A5D6XVH6_9STRA (SF3b1 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XVH6_9STRA)

HSP 1 Score: 205 bits (521), Expect = 9.580e-59
Identity = 99/118 (83.90%), Postives = 106/118 (89.83%), Query Frame = 0
Query:    8 KQTACTTVKHLSLGVAMLGCEDALVHLLNFVWPNIFETSPHVINAVFEAIEGMSVALGVTRILQYVLQGLFHPARRVREVYWKLYNSLYILGADALTPAYPRLADDGNNAYRRTHLEL 125
            +QTACTTVKHL+LGVA LGCEDALVHLLNFVWPNIFETSPHVINAVFEAIEG  VALG   +LQYVLQGLFHPARRVREVYWK+YNSLY+   DALTPAYP + DDG NAYRRT+LEL
Sbjct: 1151 RQTACTTVKHLALGVAGLGCEDALVHLLNFVWPNIFETSPHVINAVFEAIEGCRVALGPHVVLQYVLQGLFHPARRVREVYWKIYNSLYMYAQDALTPAYPAIEDDGINAYRRTYLEL 1268          
BLAST of mRNA_E-fasciculatus_F_contig14909.3493.1 vs. uniprot
Match: G5A4J4_PHYSP (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=G5A4J4_PHYSP)

HSP 1 Score: 199 bits (505), Expect = 5.160e-57
Identity = 94/120 (78.33%), Postives = 104/120 (86.67%), Query Frame = 0
Query:    8 KQTACTTVKHLSLGVAMLGCEDALVHLLNFVWPNIFETSPHVINAVFEAIEGMSVALGVTRILQYVLQGLFHPARRVREVYWKLYNSLYILGADALTPAYPRLADDGNNAYRRTHLELFV 127
            +QTACTTVKHL+LGV  LGCEDAL+HLLNFVWPNIFETSPHVINAVFEA+EG  VALG   +LQYVLQGLFHPARRVREVYWK+YNSLY+   D LTPAYP L DDG N+Y RT+LEL +
Sbjct:  746 RQTACTTVKHLALGVVGLGCEDALLHLLNFVWPNIFETSPHVINAVFEAVEGCRVALGPHVVLQYVLQGLFHPARRVREVYWKIYNSLYMYAQDGLTPAYPMLEDDGVNSYNRTYLELCI 865          
BLAST of mRNA_E-fasciculatus_F_contig14909.3493.1 vs. uniprot
Match: H3G976_PHYRM (SF3b1 domain-containing protein n=20 Tax=Peronosporaceae TaxID=4777 RepID=H3G976_PHYRM)

HSP 1 Score: 199 bits (507), Expect = 7.320e-57
Identity = 95/120 (79.17%), Postives = 105/120 (87.50%), Query Frame = 0
Query:    8 KQTACTTVKHLSLGVAMLGCEDALVHLLNFVWPNIFETSPHVINAVFEAIEGMSVALGVTRILQYVLQGLFHPARRVREVYWKLYNSLYILGADALTPAYPRLADDGNNAYRRTHLELFV 127
            +QTACTTVKHL+LGVA LGCEDAL+HLLNFVWPNIFETSPHVINAV+EA+EG  VALG   ILQYVLQGLFHPARRVREVYWK+YNSLY+   D LTPAYP L DDG N+Y RT+LEL +
Sbjct: 1110 RQTACTTVKHLALGVAGLGCEDALLHLLNFVWPNIFETSPHVINAVYEAVEGCRVALGPHVILQYVLQGLFHPARRVREVYWKIYNSLYMYAQDGLTPAYPMLEDDGVNSYNRTYLELCI 1229          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14909.3493.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FI13_ECTSI7.110e-7698.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JJ74_9PHAE9.630e-7198.31TOG domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A7S2XY64_9STRA3.780e-6480.00Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A2P4YHC9_9STRA3.780e-6480.83Splicing factor 3B subunit 1 n=1 Tax=Phytophthora ... [more]
A0A6V1S7R5_HETAK1.040e-6080.83Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A1Z9QC94_9BACT3.140e-6084.17TOG domain-containing protein n=1 Tax=Phycisphaera... [more]
A0A7S3GVU2_9STRA5.120e-5975.00Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A5D6XVH6_9STRA9.580e-5983.90SF3b1 domain-containing protein n=1 Tax=Pythium br... [more]
G5A4J4_PHYSP5.160e-5778.33Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
H3G976_PHYRM7.320e-5779.17SF3b1 domain-containing protein n=20 Tax=Peronospo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038737Splicing factor 3B subunit 1-likePANTHERPTHR12097SPLICING FACTOR 3B, SUBUNIT 1-RELATEDcoord: 7..126
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..27
score: 5.0
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 7..122

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14909contigE-fasciculatus_F_contig14909:272..1321 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14909.3493.1mRNA_E-fasciculatus_F_contig14909.3493.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig14909 272..1321 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig14909.3493.1 ID=prot_E-fasciculatus_F_contig14909.3493.1|Name=mRNA_E-fasciculatus_F_contig14909.3493.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=128bp
MATIVRQKQTACTTVKHLSLGVAMLGCEDALVHLLNFVWPNIFETSPHVI
NAVFEAIEGMSVALGVTRILQYVLQGLFHPARRVREVYWKLYNSLYILGA
DALTPAYPRLADDGNNAYRRTHLELFV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold
IPR038737SF3b_su1-like