prot_E-fasciculatus_F_contig14896.3483.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig14896.3483.1
Unique Nameprot_E-fasciculatus_F_contig14896.3483.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length327
Homology
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BLAST of mRNA_E-fasciculatus_F_contig14896.3483.1 vs. uniprot
Match: A0A6H5KUK1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUK1_9PHAE)

HSP 1 Score: 496 bits (1278), Expect = 4.340e-157
Identity = 273/340 (80.29%), Postives = 284/340 (83.53%), Query Frame = 0 
Query:    1 LSYREILFNNDGKLRPPYSAGPCASASAGYLFPKPAGGTAAVPRANSRMDESTSTPRNDFYFSERYCPATATGPGRPAPPLDLLTASLKLTGQHKLSLGRFRDVDDVRILSRANGEQASAGRAGGVIGDGAAAAA-DRWATSNGKGKDSREVS-----------AAAVGPDEPRARPATRRVGTYERERQQRCSVLHYLTMASTPRPAAAPVHSTADGHAAAAALHAARTVATAXXXXXXXXXXXXTRPEGATAAALLAAMRERPWEGRPNAGSAQDWAEWLEHLAPTLERHLRWLVVDGLAAQLDGAGEREARFVAVMKEEEEA-VEPGGPESAAPGAG 327
            LSYREILFNNDGKLRPPYSAGPCASASAGYLFPKPAGGTAAVPRA+SRMDE++STPRNDFYFSERYCPATATGP RPAPPLDLLTASLKLTGQHKLSLGRFRDVD+V   +RANGEQASAGRAGGV+  GAAAAA  RWA SNGKGKDS  VS           AAAVGPDEPRARPATRRVGTYERERQQRCSVLHYLT+ASTPRP AA V               A ++ TA            TRPEGATAAALLAAMRERPWEGRPNAGSAQDWAEWLEHL PTLERHLRWLVVDGLAAQLDGAGEREARFVAV+KE+EEA VEPGGPESAAP AG
Sbjct: 2312 LSYREILFNNDGKLRPPYSAGPCASASAGYLFPKPAGGTAAVPRASSRMDEASSTPRNDFYFSERYCPATATGPERPAPPLDLLTASLKLTGQHKLSLGRFRDVDEVGTTARANGEQASAGRAGGVVEGGAAAAAVARWANSNGKGKDSGVVSWAXXXXXXAPPAAAVGPDEPRARPATRRVGTYERERQQRCSVLHYLTIASTPRPGAAAVD--------------AASMVTATSDAISRSTSSATRPEGATAAALLAAMRERPWEGRPNAGSAQDWAEWLEHLTPTLERHLRWLVVDGLAAQLDGAGEREARFVAVVKEDEEAAVEPGGPESAAPSAG 2637
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BLAST of mRNA_E-fasciculatus_F_contig14896.3483.1 vs. uniprot
Match: D7FKG6_ECTSI (Zinc finger, CW-type with coiled-coil domain 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKG6_ECTSI)

HSP 1 Score: 363 bits (932), Expect = 1.340e-110
Identity = 215/328 (65.55%), Postives = 224/328 (68.29%), Query Frame = 0 
Query:    1 LSYREILFNNDGKLRPPYSAGPCASASAGYLFPKPAGGTAAVPRANSRMDESTSTPRNDFYFSERYCPATATGPGRPAPPLDLLTASLKLTGQHKLSLGRFRDVDDVRILSRANGEQASAGRAGGVIGDGAAAAADRWATSNGKGKDSREVSAAAVGPDEPRARPATRRVGTYERERQQRCSVLHYLTMASTPRPAAAPVHSTADGHAAAAALHAARTVATAXXXXXXXXXXXXTRPEGATAAALLAAMRERPWEGRPNAGSAQDWAEWLEHLAPTLERHLRWLVVDGLAAQLDGAGEREARFVAVMKEEEEA-VEPGGPESAAPGAG 327
            LSYREILFNNDGKLRPPYSAGPCASASAGYLFPKPAGGTAAVPRA+SRMDE++STPRNDFYFSERYCPATATGPGRPAPPLDLLTASLKLTGQHKLSLGRFRDVD+V   ++ANGEQASAGRAGGV+                                           G                                                        XXXXXXX RPEGATAAALLAAMRERPWEGRPNAGSAQDWAEWLEHLAPTLERHLRWLVVDGLAAQLDGAGEREARFVAV+KE+EEA VEPGGPESAAPGAG
Sbjct: 2246 LSYREILFNNDGKLRPPYSAGPCASASAGYLFPKPAGGTAAVPRASSRMDETSSTPRNDFYFSERYCPATATGPGRPAPPLDLLTASLKLTGQHKLSLGRFRDVDEVGATAKANGEQASAGRAGGVV------------------------------------------EGXXXXXXXXXXXXXXXXXX--------------------------------------XXXXXXXXRPEGATAAALLAAMRERPWEGRPNAGSAQDWAEWLEHLAPTLERHLRWLVVDGLAAQLDGAGEREARFVAVVKEDEEAAVEPGGPESAAPGAG 2493
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14896.3483.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KUK1_9PHAE4.340e-15780.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FKG6_ECTSI1.340e-11065.55Zinc finger, CW-type with coiled-coil domain 3 n=1... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14896contigE-fasciculatus_F_contig14896:96..1677 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14896.3483.1mRNA_E-fasciculatus_F_contig14896.3483.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig14896 96..1679 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig14896.3483.1 ID=prot_E-fasciculatus_F_contig14896.3483.1|Name=mRNA_E-fasciculatus_F_contig14896.3483.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=327bp
LSYREILFNNDGKLRPPYSAGPCASASAGYLFPKPAGGTAAVPRANSRMD
ESTSTPRNDFYFSERYCPATATGPGRPAPPLDLLTASLKLTGQHKLSLGR
FRDVDDVRILSRANGEQASAGRAGGVIGDGAAAAADRWATSNGKGKDSRE
VSAAAVGPDEPRARPATRRVGTYERERQQRCSVLHYLTMASTPRPAAAPV
HSTADGHAAAAALHAARTVATASGAASPPTSSSATRPEGATAAALLAAMR
ERPWEGRPNAGSAQDWAEWLEHLAPTLERHLRWLVVDGLAAQLDGAGERE
ARFVAVMKEEEEAVEPGGPESAAPGAG
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