prot_E-fasciculatus_F_contig1473.3387.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1473.3387.1
Unique Nameprot_E-fasciculatus_F_contig1473.3387.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length593
Homology
BLAST of mRNA_E-fasciculatus_F_contig1473.3387.1 vs. uniprot
Match: D7FRE4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRE4_ECTSI)

HSP 1 Score: 754 bits (1947), Expect = 3.610e-268
Identity = 442/576 (76.74%), Postives = 472/576 (81.94%), Query Frame = 0
Query:   11 GRGGGAGGVGDGHVVLRQHKQRHVLLETWVALLVDRTASIAVSKWKKVVLLLYCRLTNTVLKNSSLLADKQRLVAKLRRTGLELEETRNLVSSLLDSHVTVDGGLGDSAVAASAPKTPSRDQSNENFVQSTAAGDGDGSAVRHSDHQQASFYDSANSVNGGSLNVSPATLSLASEGWKDNSYYADSENAGRRSGSPSGAGTLARRAKPQEIAAEPPSAPPGLELSYLLPSKAENVPSAPARLANSRSSIAFGPRKYSRIAQTKRPTPPRNHGTTADGKAGTSVAGTAAVSTRSRVRRQSGTQENAARAPAVSSAERAAAFGTEISEPLAEEIKENIRLVSSRPTSXXXXXXXXXSPLAWVLQEARAPVPRPSPPSSLLSAAGAAVPVASTSPGSYGTGGLQRMHQRDPWRFARSSTLSAGARPANRRTSYHRGRGVHQSRRDEAFATDISEELDRTRKAIQRSTSEKISALKKEQAAAAVAAGECSAS-VLRRRHATAVKGRSNEETQQSSGRGSLPLFDLQLNAGRRLKENVASAAVNKTNATTKGPRKTPRSTVVGPGRRSKGRQRARTCLPCE 585
            G  GG GG GDGHVV RQ KQ HVL ETWVALLVDRT S+AVSKWKKVV LLYCRLTNTV KNS+LLADK RLVA+L RTGLEL+ETRNLVSSLLDSHVTVDGG GDSAV+  AP  PSRDQSNE+ VQS  AGD DG  VRHSDHQ+ SFYDSANS NG  LN  PATLS+ASE WKDNSYY D++NAG RSG PSGAG LAR AK QEIAAEP   PPGLE+SYLLPSKAENVP A ARLANSRSSI FGPRKYSR+AQTKR +P R+HGTTAD   GTSVAGTA V  RS V  QSG QENAARAPAVSSAERAAAFGTEIS+ LAEEIKENIRL SSR TS         SPLA VLQEARAPVP+PSPP SLL+AAGAA+PVAS SP   GTGG+Q+  QR PWRFARSST +A ARPAN+ TSYHRGRGVH+SRRDEAF TDISEELDRTRKAIQRSTSEKISALK+EQ AAAVA  ECSAS VLR++HATAVKGR N  TQQ +G  SLPLF  QL  GR+ KE VAS A++K NA TKGPRK PRSTVVGP R SKGRQRAR CLP E
Sbjct:   10 GGAGGCGGAGDGHVVFRQQKQGHVL-ETWVALLVDRTTSVAVSKWKKVVFLLYCRLTNTVFKNSALLADKNRLVAELHRTGLELKETRNLVSSLLDSHVTVDGGPGDSAVSVLAPNAPSRDQSNESSVQSATAGDSDGVDVRHSDHQRTSFYDSANSGNGDGLNGGPATLSMASERWKDNSYYPDNDNAGGRSGFPSGAGALARLAKLQEIAAEPAPVPPGLEISYLLPSKAENVPLAAARLANSRSSITFGPRKYSRVAQTKRTSPLRSHGTTADRLGGTSVAGTAVVRARSSVHCQSGPQENAARAPAVSSAERAAAFGTEISQSLAEEIKENIRLNSSRATSRRPSTTSAASPLAQVLQEARAPVPQPSPPYSLLAAAGAAMPVASMSPEPCGTGGVQQKTQRTPWRFARSSTFAAAARPANQSTSYHRGRGVHKSRRDEAFVTDISEELDRTRKAIQRSTSEKISALKQEQEAAAVAVRECSASSVLRQKHATAVKGRRNAATQQPAGGDSLPLFGSQLKVGRQPKETVASTAMSKENAATKGPRKAPRSTVVGPERGSKGRQRARACLPRE 584          
BLAST of mRNA_E-fasciculatus_F_contig1473.3387.1 vs. uniprot
Match: A0A6H5KDS4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDS4_9PHAE)

HSP 1 Score: 600 bits (1546), Expect = 3.770e-205
Identity = 387/622 (62.22%), Postives = 414/622 (66.56%), Query Frame = 0
Query:   49 SIAVSKWKKVVLLLYCRLTNTVLKNSSLLADKQRLVAKLRRTGLELEETRNLVSSLLDSHVTVDGGLGDSAVAASAPKTPSRDQSNENFVQSTAAGDGDGSAVRHSDHQQASFYDSANSVNGGSLNVSPATLSLASEGWKDNSYYADSENAGRRSGSPSGAGTLARRAKPQ----------------------------------------------------------------------------------EIAAEPPSAPPGLELSYLLPSKAENVPSAPARLANSRSSIAFGPRKYSRIAQTKRPTPPRNHGTTADGKAGTSVAGTAAVSTRSRVRRQSGTQENAARAPAVSSAERAAAFGTEISEPLAEEIKENIRLVSSRPTSXXXXXXXXXSPLAWVLQEARAPVPRPSPPSSLLSAAGAAVPVASTSPGSYGTGGLQRMHQRDPWRFARSSTLSAGARPANRRTSYHRGRGVHQSRRDEAFATDISEELDRTRKAIQRSTSEKISALKKEQAAAAVAAGECSASVLRRRHATAVKGRSNEETQQSSGRGSLPLFDLQLNAGRRLKENVASAAVNKTNATTKGPRKTPRSTVVGPGRRSKGRQRARTCLPCEVRL 588
            S+ VSKWKKVV LL CRLTNTV KNS+LLADK RLVA+L RTGLELEETRNLVSSLLDSHVTVDGG GDSAV  SAP  PSRDQSNE+FVQS  A DGDG                        LN  P TLS+ASE WKDNSY+ +S+NAGRRS  PSGAGTLAR AK Q                                                                                  EIAAEP  AP GLE+SYLLPSKAENVP A ARLA SRS I  GPRK SR+AQTKR +P R+H TTADG+ GTSV GTA V  R R   Q G QENAARA AVSSAERAAAF TEI++PLAEEIKENIRL+S RPTS         SPLA VLQEARAPVP P  PSSLLS AGAA+PVASTSP  YG  GLQR+HQR PWRFARSST +A AR AN+  S HRGR  HQSR DE F TDISEELDRTRKAIQRSTSEKISALKKEQA AAVAA +CSAS ++R HATAV+GR N  TQQS+G GSLPLF LQL AG R KE VAS AV K NA TK PRK PRSTVVGPGR +KGRQRAR CLP EVR+
Sbjct:  118 SVDVSKWKKVVFLLCCRLTNTVFKNSALLADKNRLVAELHRTGLELEETRNLVSSLLDSHVTVDGGPGDSAVTVSAPNAPSRDQSNESFVQSATAVDGDGVDXXXXXXXXXXXXXXXXXXXXXXLNGGPVTLSMASERWKDNSYHPNSDNAGRRSRFPSGAGTLARLAKLQGQQQGERVETIIRDDFEDVAAAATGIAQTTDSPVASERSASMVITTAYHTEVSVGDPILQCFGSGLARLVSPGAMPISAKVSEIAAEPAPAPLGLEMSYLLPSKAENVPLAAARLAISRSPITVGPRKCSRVAQTKRTSPLRSHSTTADGRGGTSVVGTAVVRARPRAHCQQGPQENAARASAVSSAERAAAFETEITDPLAEEIKENIRLISPRPTSRRPSTTSAASPLARVLQEARAPVPHPPSPSSLLSTAGAALPVASTSPERYGARGLQRIHQRPPWRFARSSTFAAAARSANQSASCHRGRSAHQSRMDEEFVTDISEELDRTRKAIQRSTSEKISALKKEQATAAVAARKCSASSVQR-HATAVEGRRNAATQQSAGGGSLPLFGLQLKAGCRPKETVASKAVIKENAGTKAPRKGPRSTVVGPGRGTKGRQRARACLPREVRI 738          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1473.3387.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FRE4_ECTSI3.610e-26876.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KDS4_9PHAE3.770e-20562.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1473contigE-fasciculatus_F_contig1473:9189..14022 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1473.3387.1mRNA_E-fasciculatus_F_contig1473.3387.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1473 9189..14022 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1473.3387.1 ID=prot_E-fasciculatus_F_contig1473.3387.1|Name=mRNA_E-fasciculatus_F_contig1473.3387.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=593bp
MEKRQHARIRGRGGGAGGVGDGHVVLRQHKQRHVLLETWVALLVDRTASI
AVSKWKKVVLLLYCRLTNTVLKNSSLLADKQRLVAKLRRTGLELEETRNL
VSSLLDSHVTVDGGLGDSAVAASAPKTPSRDQSNENFVQSTAAGDGDGSA
VRHSDHQQASFYDSANSVNGGSLNVSPATLSLASEGWKDNSYYADSENAG
RRSGSPSGAGTLARRAKPQEIAAEPPSAPPGLELSYLLPSKAENVPSAPA
RLANSRSSIAFGPRKYSRIAQTKRPTPPRNHGTTADGKAGTSVAGTAAVS
TRSRVRRQSGTQENAARAPAVSSAERAAAFGTEISEPLAEEIKENIRLVS
SRPTSRRPSTTPAASPLAWVLQEARAPVPRPSPPSSLLSAAGAAVPVAST
SPGSYGTGGLQRMHQRDPWRFARSSTLSAGARPANRRTSYHRGRGVHQSR
RDEAFATDISEELDRTRKAIQRSTSEKISALKKEQAAAAVAAGECSASVL
RRRHATAVKGRSNEETQQSSGRGSLPLFDLQLNAGRRLKENVASAAVNKT
NATTKGPRKTPRSTVVGPGRRSKGRQRARTCLPCEVRLRGVV*
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