prot_E-fasciculatus_F_contig14613.3324.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig14613.3324.1
Unique Nameprot_E-fasciculatus_F_contig14613.3324.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length54
Homology
BLAST of mRNA_E-fasciculatus_F_contig14613.3324.1 vs. uniprot
Match: A0A6H5KIH1_9PHAE (PPM-type phosphatase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KIH1_9PHAE)

HSP 1 Score: 94.0 bits (232), Expect = 4.230e-21
Identity = 46/50 (92.00%), Postives = 48/50 (96.00%), Query Frame = 0
Query:    4 SLQVVRIVRKELRMHGDTQRVCETLVRKAINERYTQDNVSVVLVVLKKFW 53
            S +VVRIVRKELRMHGDTQRVCETLVR+AINERYTQDNVSVVLVVL KFW
Sbjct: 1200 SDEVVRIVRKELRMHGDTQRVCETLVRRAINERYTQDNVSVVLVVLNKFW 1249          
BLAST of mRNA_E-fasciculatus_F_contig14613.3324.1 vs. uniprot
Match: A0A7S2V0C4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0C4_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 2.540e-7
Identity = 21/48 (43.75%), Postives = 36/48 (75.00%), Query Frame = 0
Query:    6 QVVRIVRKELRMHGDTQRVCETLVRKAINERYTQDNVSVVLVVLKKFW 53
            +V+ +++ E++ HGD QR  E L   AI++R T+DNV++VLV+L ++W
Sbjct:   97 EVIDLIKTEMKQHGDAQRAVEMLSHVAIHKRRTRDNVTIVLVILNRWW 144          
BLAST of mRNA_E-fasciculatus_F_contig14613.3324.1 vs. uniprot
Match: A0A6H5L355_9PHAE (PPM-type phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L355_9PHAE)

HSP 1 Score: 51.2 bits (121), Expect = 5.100e-7
Identity = 25/50 (50.00%), Postives = 36/50 (72.00%), Query Frame = 0
Query:    4 SLQVVRIVRKELRMHGDTQRVCETLVRKAINERYTQDNVSVVLVVLKKFW 53
            S +VV  V +++++H D QR CE L  KAI ER T+DNVS+VL+V  K++
Sbjct:   43 SEEVVANVYEKMKIHADAQRCCEDLTEKAIVERRTRDNVSLVLLVFNKWF 92          
BLAST of mRNA_E-fasciculatus_F_contig14613.3324.1 vs. uniprot
Match: A0A836CBM8_9STRA (Phosphatase 2C-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBM8_9STRA)

HSP 1 Score: 52.4 bits (124), Expect = 1.860e-6
Identity = 21/47 (44.68%), Postives = 38/47 (80.85%), Query Frame = 0
Query:    4 SLQVVRIVRKELRMHGDTQRVCETLVRKAINERYTQDNVSVVLVVLK 50
            +++VV+ V  E+ +HGD Q+ CE++  +AI ER+T+DNV+++LV+L+
Sbjct:  535 NVEVVQAVCAEMAVHGDAQKCCESITLRAIRERHTRDNVTMILVMLR 581          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14613.3324.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KIH1_9PHAE4.230e-2192.00PPM-type phosphatase domain-containing protein n=2... [more]
A0A7S2V0C4_9STRA2.540e-743.75Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6H5L355_9PHAE5.100e-750.00PPM-type phosphatase domain-containing protein n=1... [more]
A0A836CBM8_9STRA1.860e-644.68Phosphatase 2C-like domain-containing protein n=1 ... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036457PPM-type phosphatase domain superfamilyGENE3D3.60.40.10coord: 4..52
e-value: 3.6E-8
score: 35.0
IPR036457PPM-type phosphatase domain superfamilySUPERFAMILY81606PP2C-likecoord: 6..50
NoneNo IPR availablePANTHERPTHR13832:SF589PROTEIN PHOSPHATASE 2C 57coord: 4..49
IPR015655Protein phosphatase 2C familyPANTHERPTHR13832PROTEIN PHOSPHATASE 2Ccoord: 4..49

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14613contigE-fasciculatus_F_contig14613:2805..2966 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14613.3324.1mRNA_E-fasciculatus_F_contig14613.3324.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig14613 2805..2966 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig14613.3324.1 ID=prot_E-fasciculatus_F_contig14613.3324.1|Name=mRNA_E-fasciculatus_F_contig14613.3324.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=54bp
FGCSLQVVRIVRKELRMHGDTQRVCETLVRKAINERYTQDNVSVVLVVLK
KFW*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015655PP2C
IPR036457PPM-type_dom_sf