prot_E-fasciculatus_F_contig1461.3322.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1461.3322.1
Unique Nameprot_E-fasciculatus_F_contig1461.3322.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length325
Homology
BLAST of mRNA_E-fasciculatus_F_contig1461.3322.1 vs. uniprot
Match: A0A6H5J803_9PHAE (Conserved oligomeric Golgi complex subunit 4 n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J803_9PHAE)

HSP 1 Score: 438 bits (1126), Expect = 2.870e-144
Identity = 254/303 (83.83%), Postives = 257/303 (84.82%), Query Frame = 0
Query:   23 MSARASRLRLEEELRNILEQEEKLDGEVNQLLQAKAAATGPAASEEVTPAVALSNGHPAPKAGAAATGAAPTEVGEGADAKAPQDIDNGAVVVVAAGGAAAAEGEEGLAQCLVELSGSVPDFPGLEEKAGALLAQIEDGHGMAERVSRSVRRLDDIQMRVQRALALVEDVINLRGCAEGVRAAVQAGDLAEAATYVRRFREIDAGALADSGEMVDMDEAVRGLSSAVLERFETAVLDMDEPGIAAACPLLAPLGLATRGQELYLGFARRALEAELEAGAGDGSLPATQRLPAIYNTSAAFLRR 325
            MSARASRLRLEEELRNI EQEE+LDGEVNQLLQAKAAAT P A EEV+ AVALSNGH                     DAK PQD+DN               GE GLAQCL ELSGSVPDFPGLEEKA ALLAQIEDGHGMAERVSRSVRRLDDIQMRVQRALALVEDVINLRGCAEGVRAAVQAGDLAEAATYVRRFREIDAGALADSGEMVDMDEAVRGLSSAVLERFETAVLDMDEPGIAAACPLLAPLGLATRGQELYLGFARRALEAELEAGAGDGSLPATQ LPAIYNTSAAFLRR
Sbjct:    1 MSARASRLRLEEELRNISEQEERLDGEVNQLLQAKAAATVPGAPEEVSQAVALSNGHXXXXXXXXXXXXXXXXXXXXXDAKTPQDVDNXXXXXXXXXXXXX-XGEGGLAQCLEELSGSVPDFPGLEEKASALLAQIEDGHGMAERVSRSVRRLDDIQMRVQRALALVEDVINLRGCAEGVRAAVQAGDLAEAATYVRRFREIDAGALADSGEMVDMDEAVRGLSSAVLERFETAVLDMDEPGIAAACPLLAPLGLATRGQELYLGFARRALEAELEAGAGDGSLPATQSLPAIYNTSAAFLRR 302          
BLAST of mRNA_E-fasciculatus_F_contig1461.3322.1 vs. uniprot
Match: A0A836CCD6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCD6_9STRA)

HSP 1 Score: 142 bits (359), Expect = 2.300e-36
Identity = 95/223 (42.60%), Postives = 122/223 (54.71%), Query Frame = 0
Query:  125 EGEEGLAQCLVELSGSVPDFPGLEEKAGALLAQIEDGHGMAERVSRSVRRLDDIQMRVQRALALVEDVINLRGCAEGVRAAVQAGDLAEAATYVRRFREIDAGALADSGEMVDMDEAVRGLSSAVLE-------------------RFETAVLDMDEPGIAAACPLLAPLGLATRGQELYLGFARRALE---AELEAGAGDGSLPATQRLPAIYNTSAAFLRR 325
            +G + L  CL ++  + PDF  L     AL AQI +GH  AERVS +VR LD  + R   AL  V++ + LRGCAEGVR A+  GDL  A  +VRRF ++DA AL+ S E+ +M      L   VLE                   RFE AV      GI A CPLL PLGLA   +  ++ FAR  L    AEL+A A  G+ PAT  L A+YN+ AAFL++
Sbjct:   53 DGLQRLRLCLQQVEAARPDFAALRGAGAALSAQISEGHATAERVSGAVRGLDARRARAAAALTRVDEAVELRGCAEGVRGAMARGDLGAAVHHVRRFHQLDAAALSGSAELAEMAAIQEPLRLVVLEGGGHDXXXXXXXXXXXXLSRFEAAVRADSRDGIVAGCPLLGPLGLAAAAKGPFMEFARGLLGSTLAELDAAAPAGA-PATHALSALYNSCAAFLQQ 274          
BLAST of mRNA_E-fasciculatus_F_contig1461.3322.1 vs. uniprot
Match: A0A4D9D1B9_9STRA (Conserved oligomeric Golgi complex subunit 4 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D1B9_9STRA)

HSP 1 Score: 130 bits (328), Expect = 4.830e-30
Identity = 80/180 (44.44%), Postives = 104/180 (57.78%), Query Frame = 0
Query:  147 LEEKAGALLAQIEDGHGMAERVSRSVRRLDDIQMRVQRALALVEDVINLRGCAEGVRAAVQAGDLAEAATYVRRFREIDAGALADSGEMVDMDEAVRGLSSAVLERFETAVLDMDEPGIAAACPLLAPLGLATRGQELYLGFARRALEAELEAGAGDGS-LPATQRLPAIYNTSAAFLRR 325
            L  K  AL   +     +AE++S SVR LD+ QMRVQR LA+VED+INL+ CAEGV  A++  DL +A +YVR+F  I+  +   SG    +  A   L   VL R   AV   +   +   CPLL PLGLA  G  +Y  FA R L+  L+    + S LPA Q LP IYNT+A FL+R
Sbjct:  139 LTAKVSALTEHVYGCQELAEKMSSSVRELDERQMRVQRVLAMVEDIINLKTCAEGVARALEEDDLLDATSYVRQFHSIEGASAKASGHYNVLVAAEARLKETVLRRVHLAVSRSELDDVFKFCPLLGPLGLAKEGASIYESFAERLLKEGLDPLVAETSKLPAVQLLPKIYNTAAGFLQR 318          
BLAST of mRNA_E-fasciculatus_F_contig1461.3322.1 vs. uniprot
Match: A0A7S2WIB6_9STRA (Conserved oligomeric Golgi complex subunit 4 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WIB6_9STRA)

HSP 1 Score: 130 bits (326), Expect = 8.120e-30
Identity = 77/176 (43.75%), Postives = 109/176 (61.93%), Query Frame = 0
Query:  150 KAGALLAQIEDGHGMAERVSRSVRRLDDIQMRVQRALALVEDVINLRGCAEGVRAAVQAGDLAEAATYVRRFREIDAGALADSGEMVDMDEAVRGLSSAVLERFETAVLDMDEPGIAAACPLLAPLGLATRGQELYLGFARRALEAELEAG--AGDGSLPATQRLPAIYNTSAAFL 323
            +A  L  QIE+   ++ERVSR++RRLD  QM VQ ALALVED++NL+ CA+GV  A++  DL +A  YVR+F +ID+ A   S +   + +A + L + VL+RFE A    D   +A    LL PLGLA  G + YL FA+R ++  + AG  A  G  P   +LPA++N +  FL
Sbjct:   68 EAAMLAEQIEESRVLSERVSRTIRRLDRAQMNVQHALALVEDIVNLKDCAQGVITALKEEDLRDATGYVRQFHDIDSVAARASADYDRIIQAEKELQTQVLQRFEEATAKADSGEVAKYVALLGPLGLAETGLQSYLAFAKREVQRIVAAGPPAQGGGDPTDGQLPALFNAAHVFL 243          
BLAST of mRNA_E-fasciculatus_F_contig1461.3322.1 vs. uniprot
Match: A0A0G4F532_VITBC (Conserved oligomeric Golgi complex subunit 4 n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4F532_VITBC)

HSP 1 Score: 87.4 bits (215), Expect = 2.620e-15
Identity = 51/152 (33.55%), Postives = 87/152 (57.24%), Query Frame = 0
Query:  148 EEKAGALLAQIEDGHGMAERVSRSVRRLDDIQMRVQRALALVEDVINLRGCAEGVRAAVQAGDLAEAATYVRRFREI--------DAGALADSGEMVD-MDEAVRGLSSAVLERFETAVLDMDEPGIAAACPLLAPLGLATRGQELYLGFAR 290
            +  A  L A ++  H  +E++S  VRRLD ++ R++ AL LVED+++L+ CAEGV +A+  GD   AA ++ ++R +        DA AL DS  ++  +  + + L+  V ++F+ A+ + D+ G++    L  PLGL   G   Y+ F R
Sbjct:   72 QRDAQQLQATLQFVHETSEKLSSRVRRLDTVRSRIEAALQLVEDLLDLKNCAEGVESAMGRGDYETAAKHIAKYRSLAQQFRQGGDASALEDSSAVLQSLKASEKALTQMVRDQFDKAITNRDKTGVSRYAKLFYPLGLEREGINRYITFIR 223          
BLAST of mRNA_E-fasciculatus_F_contig1461.3322.1 vs. uniprot
Match: A0A812XJP0_9DINO (Conserved oligomeric Golgi complex subunit 4 n=6 Tax=Symbiodinium TaxID=2949 RepID=A0A812XJP0_9DINO)

HSP 1 Score: 81.3 bits (199), Expect = 2.840e-13
Identity = 53/146 (36.30%), Postives = 80/146 (54.79%), Query Frame = 0
Query:  158 IEDGHGMAERVSRSVRRLDDIQMRVQRALALVEDVINLRGCAEGVRAAVQAGDLAEAATYVRRFR----EIDAGALADSGEMVDMDEAVRGLSSAVLERFETAVLDMDEPGIAAACPLLAPLGLATRGQELYLGFARRALEAELEA 299
            ++   G+A+ +S  VR+LD +  RV  AL LV+D++ LR CA+ V  A+ + D  +AA +V RFR     +  G   D   +  + EA R LS+ V  RFE A+   D  G++    L  PLGLA+ G   Y+ F +R+L  +  A
Sbjct:   65 LQQTSGVADELSFRVRKLDVVCSRVSDALKLVDDLLELRECADQVMKAISSEDFEQAARFVSRFRASQDSLPPGT--DDATVRTLTEAERQLSAIVRRRFEAAMAAKDAAGVSRFAKLFHPLGLASEGVRKYVEFIQRSLAEKASA 208          
BLAST of mRNA_E-fasciculatus_F_contig1461.3322.1 vs. uniprot
Match: A0A1Q9DLP7_SYMMI (Conserved oligomeric Golgi complex subunit 4 n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9DLP7_SYMMI)

HSP 1 Score: 80.9 bits (198), Expect = 4.710e-13
Identity = 53/146 (36.30%), Postives = 80/146 (54.79%), Query Frame = 0
Query:  158 IEDGHGMAERVSRSVRRLDDIQMRVQRALALVEDVINLRGCAEGVRAAVQAGDLAEAATYVRRFR----EIDAGALADSGEMVDMDEAVRGLSSAVLERFETAVLDMDEPGIAAACPLLAPLGLATRGQELYLGFARRALEAELEA 299
            ++   G+A+ +S  VR+LD +  RV  AL LV+D++ LR CA+ V  A+ + D  +AA +V RFR     +  G   D   +  + EA R LS+ V  RFE A+   D  G++    L  PLGLA+ G   Y+ F +R+L  +  A
Sbjct:  760 LQQTSGVADELSFRVRKLDVVCSRVSDALKLVDDLLELRECADQVMKAISSEDFEQAARFVSRFRASQDSLPPGT--DDATVRTLTEAERQLSAIVRRRFEAAMAAKDAGGVSRFAKLFHPLGLASEGVRKYVEFIQRSLAEKASA 903          
BLAST of mRNA_E-fasciculatus_F_contig1461.3322.1 vs. uniprot
Match: I2CQF7_NANGC (Oligomeric golgi complex component (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQF7_NANGC)

HSP 1 Score: 73.2 bits (178), Expect = 1.080e-12
Identity = 43/90 (47.78%), Postives = 55/90 (61.11%), Query Frame = 0
Query:  168 VSRSVRRLDDIQMRVQRALALVEDVINLRGCAEGVRAAVQAGDLAEAATYVRRFREIDAGALADSGEMVDMDEAVRGLSSAVLERFETAV 257
            +S SVR LD+ QMRVQR LA+VED+INL+ CAEGV  A++  DL  A +YVR+F  I+  +   SG    +  A   L   VL R   AV
Sbjct:    1 MSSSVRELDERQMRVQRVLAMVEDIINLKTCAEGVARALEEDDLLGATSYVRQFHSIEGASAKASGHYNVLVAAEARLKETVLRRVHLAV 90          
BLAST of mRNA_E-fasciculatus_F_contig1461.3322.1 vs. uniprot
Match: A0A7S1A9N9_NOCSC (Conserved oligomeric Golgi complex subunit 4 (Fragment) n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1A9N9_NOCSC)

HSP 1 Score: 70.5 bits (171), Expect = 5.230e-10
Identity = 49/134 (36.57%), Postives = 71/134 (52.99%), Query Frame = 0
Query:  163 GMAERVSRSVRRLDDIQMRVQRALALVEDVINLRGCAEGVRAAVQAGDLAEAATYVRRFREIDAGALA---DSGEMVDMDEAVRGLSSAVLERFETAVLDMDEPGIAAACPLLAPLGLATRGQELYLGFARRAL 293
            G+A+ +S  VR+LD I  R+  AL  V+D++ LR CA+ V   +Q  +  +AA YV RFR    G L    D   +  + +A   LS  V +RFE A+   D+  I+    L   LGL+  G + YL F R +L
Sbjct:   75 GVADELSGRVRKLDTICGRITEALKFVDDMLELRECADQVMKTIQNEEFEQAAKYVSRFRACQ-GVLPPGIDDASIRVLKQAEEQLSVIVRKRFEEAMSTKDQASISRFAKLFPSLGLSGEGVKKYLEFIRHSL 207          
BLAST of mRNA_E-fasciculatus_F_contig1461.3322.1 vs. uniprot
Match: D0MY16_PHYIT (Conserved oligomeric Golgi complex subunit 4 n=14 Tax=Phytophthora TaxID=4783 RepID=D0MY16_PHYIT)

HSP 1 Score: 58.9 bits (141), Expect = 6.350e-6
Identity = 37/130 (28.46%), Postives = 66/130 (50.77%), Query Frame = 0
Query:  142 PDFPGLEEKAGALLAQIEDGHGMAERVSRSVRRLDDIQMRVQRALALVEDVINLRGCAEGVRAAVQAGDLAEAATYVRRFREIDAGALADSGEMVDMDEAVRGLSSAVLERFETAVLDMDEPGIAAACPL 271
            PD   L  + GA++ ++ + + +AE+++R VRRLD IQ+R+  AL     ++ LR    G+R A+Q     EAAT+++  + I+     D  + + +D     L + +   FE  +   D   +    PL
Sbjct:   60 PDVTVLCAQTGAVVERVANANDVAEKMTREVRRLDVIQLRLGEALEQSAQLLTLRNALAGIRRAMQQQRYPEAATFLQTLKNIEQQMPLDVADKLRVDTIENDLKAVIEGAFEDGLRAGDTRQVQTYAPL 189          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1461.3322.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A6H5J803_9PHAE2.870e-14483.83Conserved oligomeric Golgi complex subunit 4 n=2 T... [more]
A0A836CCD6_9STRA2.300e-3642.60Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A4D9D1B9_9STRA4.830e-3044.44Conserved oligomeric Golgi complex subunit 4 n=2 T... [more]
A0A7S2WIB6_9STRA8.120e-3043.75Conserved oligomeric Golgi complex subunit 4 n=1 T... [more]
A0A0G4F532_VITBC2.620e-1533.55Conserved oligomeric Golgi complex subunit 4 n=1 T... [more]
A0A812XJP0_9DINO2.840e-1336.30Conserved oligomeric Golgi complex subunit 4 n=6 T... [more]
A0A1Q9DLP7_SYMMI4.710e-1336.30Conserved oligomeric Golgi complex subunit 4 n=1 T... [more]
I2CQF7_NANGC1.080e-1247.78Oligomeric golgi complex component (Fragment) n=1 ... [more]
A0A7S1A9N9_NOCSC5.230e-1036.57Conserved oligomeric Golgi complex subunit 4 (Frag... [more]
D0MY16_PHYIT6.350e-628.46Conserved oligomeric Golgi complex subunit 4 n=14 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 25..56
NoneNo IPR availablePANTHERPTHR24016:SF0CONSERVED OLIGOMERIC GOLGI COMPLEX SUBUNIT 4coord: 141..299
NoneNo IPR availablePANTHERPTHR24016FAMILY NOT NAMEDcoord: 141..299

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1461contigE-fasciculatus_F_contig1461:12990..17014 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1461.3322.1mRNA_E-fasciculatus_F_contig1461.3322.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1461 12990..17014 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1461.3322.1 ID=prot_E-fasciculatus_F_contig1461.3322.1|Name=mRNA_E-fasciculatus_F_contig1461.3322.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=325bp
CCPGTAHSLRVRVARRKLSCRQMSARASRLRLEEELRNILEQEEKLDGEV
NQLLQAKAAATGPAASEEVTPAVALSNGHPAPKAGAAATGAAPTEVGEGA
DAKAPQDIDNGAVVVVAAGGAAAAEGEEGLAQCLVELSGSVPDFPGLEEK
AGALLAQIEDGHGMAERVSRSVRRLDDIQMRVQRALALVEDVINLRGCAE
GVRAAVQAGDLAEAATYVRRFREIDAGALADSGEMVDMDEAVRGLSSAVL
ERFETAVLDMDEPGIAAACPLLAPLGLATRGQELYLGFARRALEAELEAG
AGDGSLPATQRLPAIYNTSAAFLRR
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