prot_E-fasciculatus_F_contig14580.3302.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig14580.3302.1
Unique Nameprot_E-fasciculatus_F_contig14580.3302.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length499
Homology
BLAST of mRNA_E-fasciculatus_F_contig14580.3302.1 vs. uniprot
Match: A0A6H5JU08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU08_9PHAE)

HSP 1 Score: 575 bits (1481), Expect = 2.120e-200
Identity = 353/474 (74.47%), Postives = 372/474 (78.48%), Query Frame = 0
Query:   36 ITPDAVAERRKVSYADRGPDSIIG-----GYQH-LEVHPAATRKESKKNGGSKRAKKSKESKKTGXXXXXXXXXKVRVNKAGGRRLLQASTDPAL-PACASLFVPTGAGDELTGTYEFQGRYSHQRPVYAAENGNRFFATKDEGAMPITWYVIQPEESNSKYFLSLESDVFEPNDLELLQPWVRNNDPTCTSCISKLRMSCSDSTA--APTAXXXXXXXXXXXXXXSHAGNENSTMSXXXXXXXXXXXXXXXAPTDIPSDMTMVDTSAVGGCANLKIDNGEDRAGVYSLSGVDGEGGVVFRNGRPSYAAVGDKRTDVVFSTTMNVCAAGYGVVDADWAAHVGHLPLSATVNDVFLMYVAENVGVDTADDAAAAVATAAIASDNDDCEVPVWLLVADGAESLDDAGENTFLSVSGVDDPSEATSWAKFTPATDTTRPTLVENFWIDVGCANAGEVEEASAAA-DTGDGGEEEQVT 499
            +T D V  RR V+Y   G   ++G     GY+H LEV PAAT  +SKKNGGSKRAKKS       XXXXXXXXXKVR NK GGRRL QASTD AL PACASLFVPTGAGDELTGTY+FQG YS +RPVYAA NGN+FFA KDE  +P TWYV Q    NS +FLSLES VFEP DLE LQPWVRNNDPTC SCISKL MSCS  TA   PTA       XXXXXXX  A NEN TMS            XXX    +P D TM DTSAVGGCANLKI+NGEDRAGVYSLS VDGEGGVVFRNGRPSYAAVG  RTDVVFST MNVCA+GYGVVDADWA HVG+LP ++TVN VFLMYVAENVGVDTADDAAAA+ATAA +SDND CEVPVWLLVADGAESLD AGENTFLSVSGVDDPSEATSWAKFTPAT TTRPTL ENFWIDVGCA AGEVEEASAAA  TG GGEEEQ T
Sbjct:    1 MTADTVVGRR-VNYGG-GESGLLGAGSSGGYRHHLEVQPAATANQSKKNGGSKRAKKSXXXX-XXXXXXXXXXXKVRANKGGGRRLQQASTDGALLPACASLFVPTGAGDELTGTYDFQGHYSDRRPVYAAANGNKFFA-KDEEGVPTTWYVTQASP-NSTFFLSLESAVFEPADLEDLQPWVRNNDPTCRSCISKLSMSCSALTADAIPTAPETTTPAXXXXXXXXXAENENLTMSTAETVVPPATTPXXXX---LPPDTTMADTSAVGGCANLKINNGEDRAGVYSLSDVDGEGGVVFRNGRPSYAAVGANRTDVVFSTMMNVCASGYGVVDADWANHVGYLPPTSTVNAVFLMYVAENVGVDTADDAAAAIATAAASSDNDGCEVPVWLLVADGAESLDAAGENTFLSVSGVDDPSEATSWAKFTPATSTTRPTLEENFWIDVGCAAAGEVEEASAAAVATGYGGEEEQGT 466          
BLAST of mRNA_E-fasciculatus_F_contig14580.3302.1 vs. uniprot
Match: D7G0N9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0N9_ECTSI)

HSP 1 Score: 565 bits (1457), Expect = 8.070e-197
Identity = 339/478 (70.92%), Postives = 363/478 (75.94%), Query Frame = 0
Query:   36 ITPDAVAERRKVSYADRGPDSII------GGYQHLEVHPAATRKESKKNGGSKRAKKSKESKKTGXXXXXXXXXKVRVNKAGGRRLLQASTDPAL-PACASLFVPTGAGDELTGTYEFQGRYSHQRPVYAAENGNRFFATKDEGAMPITWYVIQPEESNSKYFLSLESDVFEPNDL----ELLQPWVRNNDPTCTSCISKLRMSCSDSTA--APTAXXXXXXXXXXXXXXSHAGNENSTMSXXXXXXXXXXXXXXXAPTDIPSDMTMVDTSAVGGCANLKIDNGEDRAGVYSLSGVDGEGGVVFRNGRPSYAAVGDKRTDVVFSTTMNVCAAGYGVVDADWAAHVGHLPLSATVNDVFLMYVAENVGVDTADDAAAAVATAAIASDNDDCEVPVWLLVADGAESLDDAGENTFLSVSGVDDPSEATSWAKFTPATDTTRPTLVENFWIDVGCANAGEVEEASAA-ADTGDGGEEEQVT 499
            +T D V  RR  SY  RG +S +      GGYQHLEVHPA+  ++ KKNGGSKRAKK        XXXXXXXXXKV  NK GGRRLLQAS D AL PAC+SLFVPTGAGDELTGTY+FQG YS +RPVYAA NGN+FFA KDE  +P TWY+ Q    NSK+FLSLES VFEP DL    ++LQPWVRNNDPTC SCISKL MSCS  TA     A            X S A NENSTMS               APTD+P+D TMVDTSAVGGCANLKI+NGEDRAGVYSLSGVDGEGGVVFRNGRPSYAAVG  RTDVVFSTTMNVCA+GYGVVDADWA  V +LP ++TVN VFLMYVAENVGVDTADDAAA+       SDND CEVPVWLLVADGAESLD AGENTFLSVSGVDDPSEATSWAKFTPAT TTRPTL ENFWID GCA+AGEVEEA AA ADT  GGEEEQ T
Sbjct:    1 MTADTVVGRR-ASY--RGGESGLLEAGSSGGYQHLEVHPASAARKGKKNGGSKRAKKXXXXX-XXXXXXXXXXXKVEANKGGGRRLLQASADGALLPACSSLFVPTGAGDELTGTYDFQGHYSDRRPVYAAANGNKFFA-KDEEGVPTTWYITQASP-NSKFFLSLESAVFEPADLKDPEDMLQPWVRNNDPTCGSCISKLHMSCSAWTADVIAAAPVTTTPAPNDPVXSSPAENENSTMSTAETVVPPATTP---APTDLPTDTTMVDTSAVGGCANLKINNGEDRAGVYSLSGVDGEGGVVFRNGRPSYAAVGADRTDVVFSTTMNVCASGYGVVDADWAVGVEYLPPTSTVNTVFLMYVAENVGVDTADDAAAS-------SDNDGCEVPVWLLVADGAESLDAAGENTFLSVSGVDDPSEATSWAKFTPATSTTRPTLEENFWIDFGCADAGEVEEALAATADTRYGGEEEQGT 462          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14580.3302.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JU08_9PHAE2.120e-20074.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G0N9_ECTSI8.070e-19770.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..25
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..499
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..25
score: 0.704

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14580contigE-fasciculatus_F_contig14580:1787..3283 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14580.3302.1mRNA_E-fasciculatus_F_contig14580.3302.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig14580 1787..3283 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig14580.3302.1 ID=prot_E-fasciculatus_F_contig14580.3302.1|Name=mRNA_E-fasciculatus_F_contig14580.3302.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=499bp
MSNTAAVSLAALSVVLGLTPTPCSGGTSLRGSPMSITPDAVAERRKVSYA
DRGPDSIIGGYQHLEVHPAATRKESKKNGGSKRAKKSKESKKTGERAKKS
RKSKVRVNKAGGRRLLQASTDPALPACASLFVPTGAGDELTGTYEFQGRY
SHQRPVYAAENGNRFFATKDEGAMPITWYVIQPEESNSKYFLSLESDVFE
PNDLELLQPWVRNNDPTCTSCISKLRMSCSDSTAAPTAAPPTTTPAPTDP
VPSHAGNENSTMSTAAETVVPPATTPAPAPTDIPSDMTMVDTSAVGGCAN
LKIDNGEDRAGVYSLSGVDGEGGVVFRNGRPSYAAVGDKRTDVVFSTTMN
VCAAGYGVVDADWAAHVGHLPLSATVNDVFLMYVAENVGVDTADDAAAAV
ATAAIASDNDDCEVPVWLLVADGAESLDDAGENTFLSVSGVDDPSEATSW
AKFTPATDTTRPTLVENFWIDVGCANAGEVEEASAAADTGDGGEEEQVT
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