prot_E-fasciculatus_F_contig1453.3272.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1453.3272.1
Unique Nameprot_E-fasciculatus_F_contig1453.3272.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length148
Homology
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BLAST of mRNA_E-fasciculatus_F_contig1453.3272.1 vs. uniprot
Match: A0A6H5JA69_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA69_9PHAE)

HSP 1 Score: 139 bits (350), Expect = 3.880e-37
Identity = 106/131 (80.92%), Postives = 110/131 (83.97%), Query Frame = 0 
Query:   20 MASKGLLLLGLLLFPCYMYSFRFTPGSTGCTARVRHRVNTGASIAK--GRSASRQAPAVAGLRASPAEEEEERPSGDAGAESAADPTAXXXXXXXXXXXXXXXXEEGVSESGTAGGAESMELRDFRARLMS 148
            MASKGLLLLGLLLFPC+  SFRF PG+TGCTA VRH  N  AS+ K  GR ASRQAPAV GLRAS AE EEERPSGDA AESAA+ TA XXXXXXXXXXXXXX EEGVSESG A GAESMELRDFRARLMS
Sbjct:    1 MASKGLLLLGLLLFPCH--SFRFNPGTTGCTAGVRHGGNP-ASMTKTRGRPASRQAPAVPGLRASAAEGEEERPSGDARAESAAESTASXXXXXXXXXXXXXX-EEGVSESGAAEGAESMELRDFRARLMS 127
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BLAST of mRNA_E-fasciculatus_F_contig1453.3272.1 vs. uniprot
Match: D7FWE6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWE6_ECTSI)

HSP 1 Score: 91.3 bits (225), Expect = 2.150e-20
Identity = 64/84 (76.19%), Postives = 67/84 (79.76%), Query Frame = 0 
Query:   65 KGRSASRQAPAVAGLRASPAEEEEERPSGDAGAESAADPTAXXXXXXXXXXXXXXXXEEGVSESGTAGGAESMELRDFRARLMS 148
            +GR ASRQAPAVAGLRAS AE+EEERPS DA AESAA+ TA XXXXX          EEGVSESG AGGAESMELRDFRARLMS
Sbjct:    4 RGRPASRQAPAVAGLRASAAEDEEERPSRDARAESAAESTASXXXXX----------EEGVSESGAAGGAESMELRDFRARLMS 77
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1453.3272.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JA69_9PHAE3.880e-3780.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWE6_ECTSI2.150e-2076.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..40
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 41..148
NoneNo IPR availableTMHMMTMhelixcoord: 21..40

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1453contigE-fasciculatus_F_contig1453:901..2700 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1453.3272.1mRNA_E-fasciculatus_F_contig1453.3272.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1453 899..2700 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1453.3272.1 ID=prot_E-fasciculatus_F_contig1453.3272.1|Name=mRNA_E-fasciculatus_F_contig1453.3272.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=148bp
PRTRHIAEPRSCRDGGRFRMASKGLLLLGLLLFPCYMYSFRFTPGSTGCT
ARVRHRVNTGASIAKGRSASRQAPAVAGLRASPAEEEEERPSGDAGAESA
ADPTASEAAGDGSASGQNGGGEEGVSESGTAGGAESMELRDFRARLMS
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