prot_E-fasciculatus_F_contig14508.3259.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig14508.3259.1
Unique Nameprot_E-fasciculatus_F_contig14508.3259.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length253
Homology
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BLAST of mRNA_E-fasciculatus_F_contig14508.3259.1 vs. uniprot
Match: D8LQW7_ECTSI (Peptidase aspartic, catalytic UBA-like n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQW7_ECTSI)

HSP 1 Score: 158 bits (400), Expect = 8.490e-42
Identity = 104/142 (73.24%), Postives = 112/142 (78.87%), Query Frame = 0 
Query:  115 ATQAPSARRARDGLPHSLSSTSIAGAAAAATTNAPMTRSRNSSTRGRGWRR-PVLSAT---RALHLAVALLALAGRMVPVRGAGGDLGSRSEWQHPGSRDRQGNEAGGDGSSGRGRREARRGYAAAFPSRGRSKREGAALSE 252
            ATQAPS RRA+DG  HSL S    GAAAA TT  PMTR R+S+TRG GWRR PV S T   RAL LAVALLALAGR+VP +GAGGDLG RSEWQHP SR R+GN+AGGDG SGRGRREARRGYA AFP R RS+REGA  SE
Sbjct:    2 ATQAPSIRRAKDGAQHSLPSAPTDGAAAA-TTKVPMTRQRHSNTRGWGWRRCPVFSTTTTIRALRLAVALLALAGRLVPAQGAGGDLGPRSEWQHPRSRGRRGNKAGGDG-SGRGRREARRGYAGAFPCRERSEREGAVASE 141
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14508.3259.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LQW7_ECTSI8.490e-4273.24Peptidase aspartic, catalytic UBA-like n=1 Tax=Ect... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14508contigE-fasciculatus_F_contig14508:1165..2619 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14508.3259.1mRNA_E-fasciculatus_F_contig14508.3259.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig14508 1165..2620 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig14508.3259.1 ID=prot_E-fasciculatus_F_contig14508.3259.1|Name=mRNA_E-fasciculatus_F_contig14508.3259.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=253bp
RAAGGWHSKRERWCLLPQHLARGILLFLCRGSQHTWDATKTNLTTPGATT
AVFSVTGVRQRAPNPPLRPPPVAACQFDSAVMIEYVSTNQRRRFDDACRC
DIKRRQLLPTAPTTATQAPSARRARDGLPHSLSSTSIAGAAAAATTNAPM
TRSRNSSTRGRGWRRPVLSATRALHLAVALLALAGRMVPVRGAGGDLGSR
SEWQHPGSRDRQGNEAGGDGSSGRGRREARRGYAAAFPSRGRSKREGAAL
SEE
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