prot_E-fasciculatus_F_contig14491.3248.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig14491.3248.1
Unique Nameprot_E-fasciculatus_F_contig14491.3248.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length72
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig14491.3248.1 vs. uniprot
Match: D8LJE5_ECTSI (Putative ubiquitously-expressed transcript variant 3 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJE5_ECTSI)

HSP 1 Score: 126 bits (316), Expect = 1.230e-35
Identity = 70/71 (98.59%), Postives = 70/71 (98.59%), Query Frame = 0 
Query:    1 VQDPSKVFVKVALGFHVEFTLPEAISFADVKRSSLASAATKLRDSEAEVARDIASAESMIRDLRALGEAVS 71
            VQDPSKVFVKVALGFHVEFTLPEAISFADVKRSSLASAA KLRDSEAEVARDIASAESMIRDLRALGEAVS
Sbjct:   79 VQDPSKVFVKVALGFHVEFTLPEAISFADVKRSSLASAAAKLRDSEAEVARDIASAESMIRDLRALGEAVS 149
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14491.3248.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LJE5_ECTSI1.230e-3598.59Putative ubiquitously-expressed transcript variant... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009053PrefoldinGENE3D1.10.287.370coord: 1..68
e-value: 3.1E-6
score: 28.9
IPR004127Prefoldin alpha-likePFAMPF02996Prefoldincoord: 1..61
e-value: 7.1E-8
score: 32.4
NoneNo IPR availableSUPERFAMILY46579Prefoldincoord: 2..66

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14491contigE-fasciculatus_F_contig14491:2449..2664 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14491.3248.1mRNA_E-fasciculatus_F_contig14491.3248.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig14491 2449..2664 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig14491.3248.1 ID=prot_E-fasciculatus_F_contig14491.3248.1|Name=mRNA_E-fasciculatus_F_contig14491.3248.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=72bp
VQDPSKVFVKVALGFHVEFTLPEAISFADVKRSSLASAATKLRDSEAEVA
RDIASAESMIRDLRALGEAVS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004127Prefoldin_subunit_alpha
IPR009053Prefoldin