prot_E-fasciculatus_F_contig14449.3231.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig14449.3231.1
Unique Nameprot_E-fasciculatus_F_contig14449.3231.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length336
Homology
BLAST of mRNA_E-fasciculatus_F_contig14449.3231.1 vs. uniprot
Match: D8LPT3_ECTSI (EsV-1-7 (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPT3_ECTSI)

HSP 1 Score: 292 bits (747), Expect = 2.050e-93
Identity = 248/373 (66.49%), Postives = 261/373 (69.97%), Query Frame = 0
Query:    4 RCESELGCVRQPTFGWEGEKARFCSAHKMENMLDVKNPRC--------------------------------------GEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXLASRRSTAGTGGAKAGSGSPAKRPRNGPRSFAHDSAXXXXXXXXXXPALPAGAMPAFSLGAGXXXXXXXXXXXRAPLPKRGHPXXXXXXTPARAGGHRRATSESWIDFCPKRVFETTSGKDAADLGA-DNNDPVPRHAAAVAARRARHHQPAPRTVNTTMATIAXXXXXXXXXXXXXXXXGSLSTMAGKGDDYRFGGKDGGGGVGRGIATTXXFFHPESVAGXXXXXXXAWVPGXXXXXXXXXXXXXXXXXX--ATGRGGVSSA 335
            RC+   GC + P +   G+KA +C+ HKM+N +DVK+PRC                                      GEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXLASRRSTAG   AK  S SPAKR RNGPRSFAHDSA XXXXXXXX PALPAGAMPAFSLGA XXXXXXXXXXXRAPLPKRGHPXXXXXXTPARAGGHRRATSESWIDFCPKRVFETT+GKDAADLGA DNNDPVPRHAAAVA R   HHQP+PRTVNT MATIA                GS  +M GKGDDYRF GKDGGG  GRGI  T  FFHPES AG       AW  G        XXXXXXXXXX  ATGRGGV+SA
Sbjct:   17 RCQMP-GCSKPPRYALPGQKAEYCTLHKMDNYVDVKHPRCESELGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXLASRRSTAGA--AKPCS-SPAKRARNGPRSFAHDSAAXXXXXXXXPPALPAGAMPAFSLGAXXXXXXXXXXXXRAPLPKRGHPXXXXXXTPARAGGHRRATSESWIDFCPKRVFETTTGKDAADLGASDNNDPVPRHAAAVARRARHHHQPSPRTVNTNMATIAAAAAVGVDLPGTTANGGSSLSMEGKGDDYRFSGKDGGGSGGRGIVMTTSFFHPESGAGRTGGGGRAWAHGNAAVGWLSXXXXXXXXXXXXATGRGGVTSA 385          
BLAST of mRNA_E-fasciculatus_F_contig14449.3231.1 vs. uniprot
Match: A0A6H5KQR5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQR5_9PHAE)

HSP 1 Score: 263 bits (673), Expect = 2.570e-77
Identity = 216/309 (69.90%), Postives = 220/309 (71.20%), Query Frame = 0
Query:    1 QHPRCESELGCVRQPTFGWEGEKARFCSAHKMENMLDVKNPRCGEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXLASRRSTAGTGGAKAGSGSPAKRPRNGPRSFAHDSAXXXXXXXXXXPALPAGAMPAFSLGAGXXXXXXXXXXXRAPLPKRGHPXXXXXXTPARAGGHRRATSESWIDFCPKRVFETTSGKDAADLG-ADNNDPVPRHAAAVAARRARHHQPAPRTVNTTMATIAXXXXXXXXXXXXXXXXGSL-STMAGKGDDYRFGGKDGGGGVGRGIATTXXFFHPESVAGXXXXXXXAWVPG 307
            +HPRCESELG                                 GEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXLASRRSTAG GG      SPAKR RNGPRSFAHDSAXXXXXXXXX P LPAGAMPAFSLGA  XXXXXXXXXXRAPLPKRGHPXXXXXXTPARAGGHRRATSESWIDFCPKRVFETT+GKDAADLG +DNNDPVPRHAAAVA R   HHQPAPRTVN  MAT+A              XX    S MAGKGDDYRFGG       GRGIATT  FFHP SVAG       AW PG
Sbjct:  426 KHPRCESELGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXLASRRSTAGGGGGAKPCSSPAKRARNGPRSFAHDSAXXXXXXXXXPPGLPAGAMPAFSLGAAGXXXXXXXXXXRAPLPKRGHPXXXXXXTPARAGGHRRATSESWIDFCPKRVFETTTGKDAADLGTSDNNDPVPRHAAAVARRARHHHQPAPRTVNPNMATVAAAAAVGVDLPATTAXXXXXXSMMAGKGDDYRFGGG------GRGIATTTSFFHPGSVAGRTGGGGRAWAPG 728          
BLAST of mRNA_E-fasciculatus_F_contig14449.3231.1 vs. uniprot
Match: A0A835ZKV3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKV3_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 2.070e-6
Identity = 22/42 (52.38%), Postives = 31/42 (73.81%), Query Frame = 0
Query:    5 CESELGCVRQPTFGWEGEKARFCSAHKMENMLDVKNPRCGEP 46
            C +  GC +QP+FG+ GE+ R+C+ HK+  M+DVKN RC EP
Sbjct:    9 CNAPEGCDKQPSFGFIGERPRYCATHKLGGMIDVKNKRCEEP 50          
BLAST of mRNA_E-fasciculatus_F_contig14449.3231.1 vs. uniprot
Match: D7G0X0_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0X0_ECTSI)

HSP 1 Score: 55.5 bits (132), Expect = 9.440e-5
Identity = 23/39 (58.97%), Postives = 30/39 (76.92%), Query Frame = 0
Query:    4 RCESELGCVRQPTFGWEGEKARFCSAHKMENMLDVKNPR 42
            RCE    C RQPT+G +G++AR+CS+HK E M+DVKN R
Sbjct:    9 RCEF-FECTRQPTYGQDGQRARYCSSHKEEGMIDVKNCR 46          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14449.3231.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LPT3_ECTSI2.050e-9366.49EsV-1-7 (Partial) (Fragment) n=1 Tax=Ectocarpus si... [more]
A0A6H5KQR5_9PHAE2.570e-7769.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZKV3_9STRA2.070e-652.38Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7G0X0_ECTSI9.440e-558.97EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14449contigE-fasciculatus_F_contig14449:34..1712 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14449.3231.1mRNA_E-fasciculatus_F_contig14449.3231.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig14449 34..1712 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig14449.3231.1 ID=prot_E-fasciculatus_F_contig14449.3231.1|Name=mRNA_E-fasciculatus_F_contig14449.3231.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=336bp
QHPRCESELGCVRQPTFGWEGEKARFCSAHKMENMLDVKNPRCGEPGCLK
RPRYGEEGGRARFCAAHRFDDMVDLASRRSTAGTGGAKAGSGSPAKRPRN
GPRSFAHDSAAAAAAAAAKPPALPAGAMPAFSLGAGGGAGGGGGGGGRAP
LPKRGHPVPKRGHTPARAGGHRRATSESWIDFCPKRVFETTSGKDAADLG
ADNNDPVPRHAAAVAARRARHHQPAPRTVNTTMATIAAATAVGVDPPPPT
TNSGSLSTMAGKGDDYRFGGKDGGGGVGRGIATTTSFFHPESVAGRTGGG
GRAWVPGNAAAGWLSSGGGGGGGSAATGRGGVSSAS
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