prot_E-fasciculatus_F_contig14413.3210.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig14413.3210.1
Unique Nameprot_E-fasciculatus_F_contig14413.3210.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length329
Homology
BLAST of mRNA_E-fasciculatus_F_contig14413.3210.1 vs. uniprot
Match: D7G787_ECTSI (Exonuclease domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G787_ECTSI)

HSP 1 Score: 389 bits (998), Expect = 1.320e-123
Identity = 275/329 (83.59%), Postives = 280/329 (85.11%), Query Frame = 0
Query:    1 EEGHLVLHVRAPVLGGKSSPTDTDTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPATVDVRDMMDTEGGGAADGNASPGGGADADGGPVGETRGEDDDEEEWLMFNDFLVEKTVLDDARGFGPEWKEPCVLVYRRVPSPEEEGENARRAAAMAVTKKRLAITPSVFDIAPLSKNRPVSQVVRLPPDRLPGKGDIVAIDAEFVSLTVEESRLRGDGSKVVTKQGRQSLARVSALDGRHSGSGSGSEANAIVMMDDYVVQSEPVVDHLTRFSGITPG 329
            EEGHLVLHVRAPVLGGK S TD +TA     XXXXXXXXXXXXXXXXXXXXXX                         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   VDVRDM DTEGGGAADGNASPGGG DAD G V   RGE+++EEEWLMFNDFLVEKTVLDDARGFGPEWKEPCVLVYRRVPS EEEGENARRAAAMA+TKKRLAITPSVFDIAPLSKNRPVSQVVRLPPDRLPGKGDIVAIDAEFVSLTVEESRLRGDGSKVVTKQGRQSLARVSALDGRHSG    SE NAIVMMDDYVVQSEPVVDHLTRFSGITPG
Sbjct:  607 EEGHLVLHVRAPVLGGKPSSTD-NTATPTKPXXXXXXXXXXXXXXXXXXXXXXAKGRREGGAAVASPGATGGKNGGSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDVRDMTDTEGGGAADGNASPGGGRDADRGTV---RGEEEEEEEWLMFNDFLVEKTVLDDARGFGPEWKEPCVLVYRRVPSAEEEGENARRAAAMALTKKRLAITPSVFDIAPLSKNRPVSQVVRLPPDRLPGKGDIVAIDAEFVSLTVEESRLRGDGSKVVTKQGRQSLARVSALDGRHSG----SEVNAIVMMDDYVVQSEPVVDHLTRFSGITPG 927          
BLAST of mRNA_E-fasciculatus_F_contig14413.3210.1 vs. uniprot
Match: A0A6H5KX54_9PHAE (Exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX54_9PHAE)

HSP 1 Score: 322 bits (826), Expect = 1.600e-96
Identity = 164/174 (94.25%), Postives = 167/174 (95.98%), Query Frame = 0
Query:  156 WLMFNDFLVEKTVLDDARGFGPEWKEPCVLVYRRVPSPEEEGENARRAAAMAVTKKRLAITPSVFDIAPLSKNRPVSQVVRLPPDRLPGKGDIVAIDAEFVSLTVEESRLRGDGSKVVTKQGRQSLARVSALDGRHSGSGSGSEANAIVMMDDYVVQSEPVVDHLTRFSGITPG 329
            WLMFNDFLVEKTVLDDARGFGPEWKEPCVLVYRRVPS EEE ENARRAAAMA+ +KRLAITPSVFDIAPLSKNRPVSQVVRLPPDRLPGKGDIVAIDAEFVSLTVEESRLRGDGSKVVTKQGRQSLARVSALDGR+SG    SEANAIVMMDDYVVQSEPVVDHLTRFSGITPG
Sbjct: 1321 WLMFNDFLVEKTVLDDARGFGPEWKEPCVLVYRRVPSAEEEAENARRAAAMALARKRLAITPSVFDIAPLSKNRPVSQVVRLPPDRLPGKGDIVAIDAEFVSLTVEESRLRGDGSKVVTKQGRQSLARVSALDGRYSG----SEANAIVMMDDYVVQSEPVVDHLTRFSGITPG 1490          
BLAST of mRNA_E-fasciculatus_F_contig14413.3210.1 vs. uniprot
Match: A0A836CIT6_9STRA (Exonuclease-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIT6_9STRA)

HSP 1 Score: 168 bits (426), Expect = 1.590e-45
Identity = 90/198 (45.45%), Postives = 122/198 (61.62%), Query Frame = 0
Query:  129 NASPGGGADADGGPVGETRGEDDDEEEWLMFNDFLVEKTVLDDARGFGPEWKEPCVLVYRRVPSPEEEGENARRAAAMAVTKKRLAITPSVFDIAPLSKNRPVSQVVRLPPDRLPGKGDIVAIDAEFVSLTVEESRLRGDGSKVVTKQGRQSLARVSALDGRHSGSGSGSEANAIVMMDDYVVQSEPVVDHLTRFSGI 326
            + + GGG DA+     +  G+      WL+FND L ++T LDD RGFGP WK PC+L+YR      +E E    A         LA+ P+VF I   ++N P  +   +PP++LPG+G +VA+DAEFV L +EE RLR DGS+VVTK  RQ LARVS +D           A   V++DDY++Q+EPV+DHLTRFSG+
Sbjct:   61 STAAGGGDDAESSSQADAAGDGG----WLIFNDMLSQRTFLDDVRGFGPAWKNPCILLYR------DESEGRLPAKLCEQPPPALAMPPAVFSIPSFAQNSPGGRKPAIPPEKLPGEGAVVALDAEFVCLEMEEVRLRSDGSRVVTKPARQGLARVSVVD-----------AEGQVIIDDYIIQTEPVLDHLTRFSGV 237          
BLAST of mRNA_E-fasciculatus_F_contig14413.3210.1 vs. uniprot
Match: K8ZCB7_NANGC (PAB-dependent poly(A)-specific ribonuclease subunit 2 n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8ZCB7_NANGC)

HSP 1 Score: 135 bits (340), Expect = 2.490e-33
Identity = 95/243 (39.09%), Postives = 121/243 (49.79%), Query Frame = 0
Query:  117 MMDTEGGGAADGNASPGGGADADGGPVGETRGEDDDEEEWLMFNDFLVEKTVLDDARGFGPEWKEPCVLVYRRVPSP---------------------------EEEGEN-----ARRAAAMAVTKKRLAITPSVFDIAPLSKNRPVSQVVR-LPPDRLPGKGDIVAIDAEFVSLTVEESRLRGDGSKVVTKQGRQSLARVSALDGRHSGSGSGSEANAIVMMDDYVVQSEPVVDHLTRFSGI 326
            M   EGGG  DG  S                   D E +W + NDFLVE T+L+DA GF P WKEPC+L+YR   S                            EE+GEN     A  A  +AV     +I  S+F     S   P+      L P+ LPG+GD+V IDAEFV L +E + +   G++VV K+GRQ+LAR+S LD R             VM+DDYV+ SEPV+D+LTRFSGI
Sbjct:    1 MEGVEGGGGEDGRGS-------------------DPEWQWYIVNDFLVEPTILEDALGFLPAWKEPCILLYRDRTSTAAAHAAWLEQLRAAGARVAGGGKREVGEEKGENDSSADASGAGGLAVGTLPPSIPVSIFASPSRSTATPLPPTFXXLTPEALPGRGDLVGIDAEFVQLEMETASVLETGARVVFKEGRQALARLSLLDVRSDQ----------VMVDDYVLPSEPVMDYLTRFSGI 214          
BLAST of mRNA_E-fasciculatus_F_contig14413.3210.1 vs. uniprot
Match: A0A4D9D4P1_9STRA (Exonuclease domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D4P1_9STRA)

HSP 1 Score: 138 bits (347), Expect = 1.660e-32
Identity = 93/223 (41.70%), Postives = 119/223 (53.36%), Query Frame = 0
Query:  143 VGETRGED----DDEEEWLMFNDFLVEKTVLDDARGFGPEWKEPCVLVYRRVPSP---------------------------EEEGEN-----ARRAAAMAVTKKRLAITPSVFDIAPLSKNRPVSQVVR-LPPDRLPGKGDIVAIDAEFVSLTVEESRLRGDGSKVVTKQGRQSLARVSALDGRHSGSGSGSEANAIVMMDDYVVQSEPVVDHLTRFSGITP 328
            V E  GED    D E +W + NDFLVE T+L+DA GF P WKEPC+L+YR   S                            EE+ EN     A  A  +AV     +I  S+F    LS   P+      L P+ LPG+GD+V IDAEFV L +E + +   G++VV K+GRQ+LAR+S LD R             VM+DDYV+ SEPV+D+LTRFSGI P
Sbjct:  602 VEEGGGEDGRGTDPEWQWYIVNDFLVEATILEDALGFLPTWKEPCILLYRDRTSTAAAHAAWLEQLRAVGARVAGGGKREVDEEKAENDSSTDASGAGGLAVGSLPPSIPVSIFASPSLSTATPLPPTFTPLTPEALPGRGDLVGIDAEFVQLEMETASVLETGARVVFKEGRQALARLSLLDVRSDQ----------VMVDDYVLPSEPVMDYLTRFSGIVP 814          
BLAST of mRNA_E-fasciculatus_F_contig14413.3210.1 vs. uniprot
Match: A0A7S1B6P0_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B6P0_9STRA)

HSP 1 Score: 136 bits (343), Expect = 6.500e-32
Identity = 78/186 (41.94%), Postives = 107/186 (57.53%), Query Frame = 0
Query:  153 EEEWLMFNDFLVEKTVLDDARGFGPEWKEPCVLVYRRVPSPEEEGENARRAAAMAVTK----------KRLAITPSVFDIAPLSKNRPVSQVVRLPPDRLPGKGDIVAIDAEFVSLTVEESRLRGDGSKVVTKQGRQSLARVSALDGRHSGSGSGSEANAIVMMDDYVVQSEPVVDHLTRFSGITP 328
            E+EW++FN F V +T++DDAR F   +K+PC+++YR     E   +N +  +    +           K+  I PSV D   +      S   ++ P+ LPGKGD+VAID EFVS+  E+S L   G+KV+  +GR  LARVS +D RH   GS       V+ DDYV   EPVVD+LTR SGITP
Sbjct: 1394 EDEWVLFNGFNVSRTIVDDARAFHIPFKDPCIVLYRSCGEEEGVDKNLQTGSKKEWSPSNMPQKTYFAKKRNIPPSVMDSPSIVAGFQPSSCRKISPEDLPGKGDLVAIDTEFVSVQHEQSTLTTKGTKVMVTEGRSVLARVSVIDCRHIEDGS----KGGVLFDDYVYPMEPVVDYLTRHSGITP 1575          
BLAST of mRNA_E-fasciculatus_F_contig14413.3210.1 vs. uniprot
Match: A0A397BVH1_9STRA (Exonuclease domain-containing protein (Fragment) n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397BVH1_9STRA)

HSP 1 Score: 132 bits (332), Expect = 1.160e-31
Identity = 77/172 (44.77%), Postives = 106/172 (61.63%), Query Frame = 0
Query:  156 WLMFNDFLVEKTVLDDARGFGPEWKEPCVLVYRRVPSPEEEGENARRAAAMAVTKKRLAITPSVFDIAPLSKNRPVSQVVRLPPDRLPGKGDIVAIDAEFVSLTVEESRLRGDGSKVVTKQGRQSLARVSALDGRHSGSGSGSEANAIVMMDDYVVQSEPVVDHLTRFSGIT 327
            W++ NDF V  + +DDA  F P WK P VL++RR  SP           A+A TK  + I  +VFD APL  N  V+ V++     LP +GD VAID EFV + +EE+ L+ DG++VV K+ RQSLARVS + G             +V++DDY++ +EPVVD+LTRFSG+T
Sbjct:  146 WMLLNDFAVSTSTVDDAVNFSPPWKYPSVLLFRRASSPN----------AVADTKV-VPIPSTVFDAAPL--NPSVASVIKAV--TLPKRGDRVAIDTEFVIVEMEEATLQTDGTRVVIKESRQSLARVSVIHGETD----------VVIVDDYILPNEPVVDYLTRFSGLT 292          
BLAST of mRNA_E-fasciculatus_F_contig14413.3210.1 vs. uniprot
Match: A0A6G0XRY2_9STRA (Exonuclease domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XRY2_9STRA)

HSP 1 Score: 134 bits (336), Expect = 4.850e-31
Identity = 78/176 (44.32%), Postives = 105/176 (59.66%), Query Frame = 0
Query:  154 EEWLMFNDFLVEKTVLDDARGFGPEWKEPCVLVYRRVPSPEEEGENARRAAAMAVTKKRLAITPSVFDIAPLSKNRPVSQVVRLPPDRLPGKGDIVAIDAEFVSLTVEESRLRGDGSKVVTKQGRQSLARVSALDGRHSGSGSGSEANAIVMMDDYVVQSEPVVDHLTRFSGITPG 329
            EEWL+ NDF V  +  DDA  F P+WK PCVL++ R  S  E           +  +  + I  S+F  APL+   P +  V +P  RLP +GD VAID EFV + +EE+ L+ DG+++VTK+ RQSLARVS L G              V++DDYV+ +EPVVD+LTRFSG+  G
Sbjct:  760 EEWLLCNDFSVTTSTEDDALDFSPQWKFPCVLLFSRGSSDYE-----------STVETSIQIPDSIFQAAPLN---PGAAAVEMP--RLPQRGDRVAIDTEFVIVEMEEAVLQTDGTRIVTKESRQSLARVSLLHGETDN----------VIVDDYVLPNEPVVDYLTRFSGLVAG 909          
BLAST of mRNA_E-fasciculatus_F_contig14413.3210.1 vs. uniprot
Match: A0A024UA66_9STRA (Exonuclease domain-containing protein n=4 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UA66_9STRA)

HSP 1 Score: 131 bits (330), Expect = 3.010e-30
Identity = 76/172 (44.19%), Postives = 103/172 (59.88%), Query Frame = 0
Query:  156 WLMFNDFLVEKTVLDDARGFGPEWKEPCVLVYRRVPSPEEEGENARRAAAMAVTKKRLAITPSVFDIAPLSKNRPVSQVVRLPPDRLPGKGDIVAIDAEFVSLTVEESRLRGDGSKVVTKQGRQSLARVSALDGRHSGSGSGSEANAIVMMDDYVVQSEPVVDHLTRFSGIT 327
            W++ NDF V ++ +DDA  F P WK P VL+YRR  SP            +  T     I  ++FD APL+   P     R+    LP KGD VAID EFV + +EE+ L+ DG++VV K+ RQSLARVS + G         E +A V++DDY++ +EPVVD+LTRFSG+T
Sbjct:  777 WMLLNDFTVSESSVDDAINFSPPWKYPSVLLYRREGSP----------VVLDTTAPPAPIPSTIFDAAPLN---PTVARPRMSTVTLPKKGDRVAIDTEFVIVEMEEATLQTDGTRVVIKESRQSLARVSVIHG---------ETDA-VLVDDYILPNEPVVDYLTRFSGLT 925          
BLAST of mRNA_E-fasciculatus_F_contig14413.3210.1 vs. uniprot
Match: W4G622_9STRA (Exonuclease domain-containing protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G622_9STRA)

HSP 1 Score: 130 bits (328), Expect = 5.510e-30
Identity = 78/172 (45.35%), Postives = 108/172 (62.79%), Query Frame = 0
Query:  156 WLMFNDFLVEKTVLDDARGFGPEWKEPCVLVYRRVPSPEEEGENARRAAAMAVTKKRLAITPSVFDIAPLSKNRPVSQVVRLPPDRLPGKGDIVAIDAEFVSLTVEESRLRGDGSKVVTKQGRQSLARVSALDGRHSGSGSGSEANAIVMMDDYVVQSEPVVDHLTRFSGIT 327
            W++ NDF V  + +DDA  F P WK P VL++RR  S            A+A TK  + I  SVFD APL  N  V+ V++    +LP +GD VAID EFV + +EE+ L+ DG++VV K+ RQSLARVS + G         E +A+++ DDY++ +EPVVD+LTRFSG+T
Sbjct:  769 WMLLNDFAVSTSTVDDAVNFSPPWKYPSVLLFRRASSSSLN--------AVADTKV-VPIPSSVFDAAPL--NPSVASVIKAV--KLPKRGDRVAIDTEFVIVEMEEATLQTDGTRVVIKESRQSLARVSVIHG---------ETDAVIV-DDYILPNEPVVDYLTRFSGLT 917          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14413.3210.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G787_ECTSI1.320e-12383.59Exonuclease domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5KX54_9PHAE1.600e-9694.25Exonuclease domain-containing protein n=1 Tax=Ecto... [more]
A0A836CIT6_9STRA1.590e-4545.45Exonuclease-domain-containing protein n=1 Tax=Trib... [more]
K8ZCB7_NANGC2.490e-3339.09PAB-dependent poly(A)-specific ribonuclease subuni... [more]
A0A4D9D4P1_9STRA1.660e-3241.70Exonuclease domain-containing protein n=1 Tax=Nann... [more]
A0A7S1B6P0_9STRA6.500e-3241.94Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A397BVH1_9STRA1.160e-3144.77Exonuclease domain-containing protein (Fragment) n... [more]
A0A6G0XRY2_9STRA4.850e-3144.32Exonuclease domain-containing protein n=1 Tax=Apha... [more]
A0A024UA66_9STRA3.010e-3044.19Exonuclease domain-containing protein n=4 Tax=Apha... [more]
W4G622_9STRA5.510e-3045.35Exonuclease domain-containing protein n=4 Tax=Apha... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 243..329
e-value: 2.0E-6
score: 29.3
NoneNo IPR availableGENE3D3.90.70.10coord: 127..195
e-value: 8.0E-8
score: 33.4
NoneNo IPR availablePANTHERPTHR15728UBIQUITIN SPECIFIC PROTEASE 52 / POLY A RIBONUCLEASE SUBUNIT PAN2coord: 143..329

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14413contigE-fasciculatus_F_contig14413:993..3311 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14413.3210.1mRNA_E-fasciculatus_F_contig14413.3210.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig14413 993..3311 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig14413.3210.1 ID=prot_E-fasciculatus_F_contig14413.3210.1|Name=mRNA_E-fasciculatus_F_contig14413.3210.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=329bp
EEGHLVLHVRAPVLGGKSSPTDTDTATPTKPPPPPAVKKDARKDGGGGGG
GKGKGRREGGATAAAAAAAASPGAAGGKNGGSDSSSGSSSGSGSGKGGGG
AAAAAAVAPATVDVRDMMDTEGGGAADGNASPGGGADADGGPVGETRGED
DDEEEWLMFNDFLVEKTVLDDARGFGPEWKEPCVLVYRRVPSPEEEGENA
RRAAAMAVTKKRLAITPSVFDIAPLSKNRPVSQVVRLPPDRLPGKGDIVA
IDAEFVSLTVEESRLRGDGSKVVTKQGRQSLARVSALDGRHSGSGSGSEA
NAIVMMDDYVVQSEPVVDHLTRFSGITPG
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf