prot_E-fasciculatus_F_contig143.3137.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig143.3137.1
Unique Nameprot_E-fasciculatus_F_contig143.3137.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length614
Homology
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BLAST of mRNA_E-fasciculatus_F_contig143.3137.1 vs. uniprot
Match: D8LTF4_ECTSI (WW domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTF4_ECTSI)

HSP 1 Score: 781 bits (2017), Expect = 4.630e-280
Identity = 398/493 (80.73%), Postives = 417/493 (84.58%), Query Frame = 0 
Query:  121 MPGEAANDEFELNEDRSPAEWMRVGDTTGDNFLWYTVMLEIASACCSIVFIASHDENQLSWKTDCWGRWTSLSDAEDVQFVEFDTHIGWQKYGKVDKLGLISELSESTAVMGSLAGGMHGLVIIIACVFFFFSASALWLSYFDFCCARQTPTADKGKVGPPQEGPKTKPTMRHHPLVLARDCHRWMFVMAASYILAGLWCFGVGCIGFYVVVMGDFTDGLQDTISGWGESVSCTEPQTSPRYGFFANGLSILLFFGGGTIILYKTYVSDRELSEAVEMWKNDRAEMAEMDARLAMIRKKEDYKAQVASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHYAKPSDLGXXXXXXXXXXXXVSLPSSAGTASSAQRRDGLHKRMTTKATFSPHDLEHEEQSIGSSTVSTPRDPRQSPSLAFLESPLLQSPEPQVSNTDRDLEIGSGSAAAPVDDDLPPPQGWDVRTTPSGDKFWVNIATKNVSWDRPT 613
            MPGEAANDEFELNEDRSPAEWMRVGDTTGD FLWYTVMLEIASACCSIV+I SHDE+QL WKTDCWGRWTSLSDAEDVQFVEFDTHIGWQ+YGKVDKLGL+SELSESTAVMGSLAGGMHGLVIIIACVF   S+SALWLSYFDFCC+RQTPT + GKVGP +EG KTKP MR HPLVLARDCHRWMFVMAASYILAGLWCFGVGCIGFYVV+MGDFTDGLQDTISGWGESVSCTEPQTSPRYGFFANGLSILLFFGGGTIILYKTYVSDRELSEAVEMWKNDRAEMAEM+ARLAMIRKKEDYKAQVASA                                    ++A PSDL             VS PSSAGTAS+A+  DG HKRM TKA FSP DLEH+EQS+GS T  TPRDPRQSPSL+FLES LLQSPEPQVSN DRDLE+GSGSAAAPVDDDLPPP GW+VRTTP GDKFWVNIATKNVSWDRPT
Sbjct:    1 MPGEAANDEFELNEDRSPAEWMRVGDTTGDAFLWYTVMLEIASACCSIVYITSHDEDQLLWKTDCWGRWTSLSDAEDVQFVEFDTHIGWQQYGKVDKLGLLSELSESTAVMGSLAGGMHGLVIIIACVFXXXSSSALWLSYFDFCCSRQTPTHE-GKVGP-KEGQKTKPAMRDHPLVLARDCHRWMFVMAASYILAGLWCFGVGCIGFYVVIMGDFTDGLQDTISGWGESVSCTEPQTSPRYGFFANGLSILLFFGGGTIILYKTYVSDRELSEAVEMWKNDRAEMAEMEARLAMIRKKEDYKAQVASAAASAASPVPIFKSRKSQNNAPSSFSPSPTAASSRNGYHANPSDL--DDMLPLSPPDLVSPPSSAGTASTAEGWDGRHKRMATKAAFSPKDLEHDEQSVGS-TADTPRDPRQSPSLSFLESSLLQSPEPQVSNIDRDLELGSGSAAAPVDDDLPPPPGWEVRTTPMGDKFWVNIATKNVSWDRPT 488
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig143.3137.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LTF4_ECTSI4.630e-28080.73WW domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.20.70.10coord: 569..613
e-value: 2.5E-7
score: 32.0
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 333..363
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 384..613
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 152..172
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..151
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 305..332
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 260..304
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 173..237
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 364..383
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 238..259
NoneNo IPR availableTMHMMTMhelixcoord: 151..173
NoneNo IPR availableTMHMMTMhelixcoord: 361..383
NoneNo IPR availableTMHMMTMhelixcoord: 310..332
NoneNo IPR availableTMHMMTMhelixcoord: 240..262
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 581..613
score: 12.925
IPR036020WW domain superfamilySUPERFAMILY51045WW domaincoord: 576..612

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig143contigE-fasciculatus_F_contig143:13813..17695 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig143.3137.1mRNA_E-fasciculatus_F_contig143.3137.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig143 13628..18390 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig143.3137.1 ID=prot_E-fasciculatus_F_contig143.3137.1|Name=mRNA_E-fasciculatus_F_contig143.3137.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=614bp
MSRADAVGDWSLFPDKETTLAQVDAAPETEAGSRSDETNAAKPGVAVHSQ
NSFKSPVGEQGSDRLSLGRGKQNERKGLELIKSKDVPSPLDSGVRFKEED
DLEAARGTQTPTTSKSLVGAMPGEAANDEFELNEDRSPAEWMRVGDTTGD
NFLWYTVMLEIASACCSIVFIASHDENQLSWKTDCWGRWTSLSDAEDVQF
VEFDTHIGWQKYGKVDKLGLISELSESTAVMGSLAGGMHGLVIIIACVFF
FFSASALWLSYFDFCCARQTPTADKGKVGPPQEGPKTKPTMRHHPLVLAR
DCHRWMFVMAASYILAGLWCFGVGCIGFYVVVMGDFTDGLQDTISGWGES
VSCTEPQTSPRYGFFANGLSILLFFGGGTIILYKTYVSDRELSEAVEMWK
NDRAEMAEMDARLAMIRKKEDYKAQVASAAASAASPMPIFKSRKSQNSSP
SSFSSSPTAASSRNGHYAKPSDLGDMPPFSPPLPDLVSLPSSAGTASSAQ
RRDGLHKRMTTKATFSPHDLEHEEQSIGSSTVSTPRDPRQSPSLAFLESP
LLQSPEPQVSNTDRDLEIGSGSAAAPVDDDLPPPQGWDVRTTPSGDKFWV
NIATKNVSWDRPT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036020WW_dom_sf
IPR001202WW_dom