prot_E-fasciculatus_F_contig14239.3101.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig14239.3101.1
Unique Nameprot_E-fasciculatus_F_contig14239.3101.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length300
Homology
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BLAST of mRNA_E-fasciculatus_F_contig14239.3101.1 vs. uniprot
Match: A0A6H5JKL9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKL9_9PHAE)

HSP 1 Score: 282 bits (722), Expect = 7.540e-83
Identity = 218/306 (71.24%), Postives = 235/306 (76.80%), Query Frame = 0 
Query:    7 LEARVKIRVDAVRTDLSVPFVENVARHVLAGPLVTQLLLPQPQGDSGSAGAAPRAPSDGAAPSAAASPSPS--------VVGGAQTAADEGVGQDFSDSNGAXXXXXXXXXXXXXXXXXXXXGVPAGSVGTGWGDGPRQGGGGAEDDNSWENVVYVKVGLEVCDCELGVPLDGGVGADGRSGGQHGIVADGSGSRVAAKLGLLLADATWTAPA----ASSAAXXXXXXXXXPGGSLSVETLVSSAAVKLEPEGFDLLEAVHTRVVGRLPLGATGAADPAAPXXXXXXXXXXXXXXXXXXDLAEKLR 300
            LEARVKIR+DAVRTDLSVPFVEN+ARHVL GP+++QLLLPQPQGDS +                               V GGAQ  ADEG+ +DFSDSNG XXXXXXXXXXXXXXX     G PAGSVGTGW DGPRQGG   EDDNSWEN+V++KVGLEVCDCELGVPLDGG+ ADG SGG  GI+AD +GSRVAAKLGLLL D TW APA    A++ A XXXXXXX PGGSLSVETLVSSAAV LEPEGFDLLEAVH RV+GR  LGATGAADP   XXXXXXXXXXXXXXXXXX LAEKLR
Sbjct:  931 LEARVKIRLDAVRTDLSVPFVENIARHVLTGPMMSQLLLPQPQGDSCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAGGAQATADEGLRRDFSDSNGTXXXXXXXXXXXXXXXT----GAPAGSVGTGWRDGPRQGGV-TEDDNSWENLVFIKVGLEVCDCELGVPLDGGICADGGSGGLDGIIADRAGSRVAAKLGLLLTDVTWMAPAVRPAATTEAGXXXXXXXGPGGSLSVETLVSSAAVMLEPEGFDLLEAVHARVLGRFLLGATGAADPXXXXXXXXXXXXXXXXXXXXXXLAEKLR 1231
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BLAST of mRNA_E-fasciculatus_F_contig14239.3101.1 vs. uniprot
Match: D8LP20_ECTSI (Vacuolar protein sorting-associated protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP20_ECTSI)

HSP 1 Score: 174 bits (441), Expect = 3.030e-45
Identity = 94/122 (77.05%), Postives = 99/122 (81.15%), Query Frame = 0 
Query:  154 VKVGLEVCDCELGVPLDGGVGADGRSGGQHGIVADGSGSRVAAKLGLLLADATWTAPAASSAAXXXXXXXXXPGGSLSVETLVSSAAVKLEPEGFDLLEAVHTRVVGRLPLGATGAADPAAP 275
            V VGLEVCDCELGVPLDGG+GADG SGG  GI+A  +GSRVAAKLGLLL D TWTAPA   AA         PGGSLSVETLVSSA VKLEPEGF+LLEAVH RV+GR PLGATGAADPAAP
Sbjct: 2086 VNVGLEVCDCELGVPLDGGIGADGGSGGLDGIIAGRAGSRVAAKLGLLLTDVTWTAPAVRPAAITEASGGGGPGGSLSVETLVSSAVVKLEPEGFNLLEAVHARVLGRFPLGATGAADPAAP 2207
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14239.3101.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JKL9_9PHAE7.540e-8371.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LP20_ECTSI3.030e-4577.05Vacuolar protein sorting-associated protein, putat... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14239contigE-fasciculatus_F_contig14239:776..1953 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14239.3101.1mRNA_E-fasciculatus_F_contig14239.3101.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig14239 775..1953 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig14239.3101.1 ID=prot_E-fasciculatus_F_contig14239.3101.1|Name=mRNA_E-fasciculatus_F_contig14239.3101.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=300bp
GGGGGGLEARVKIRVDAVRTDLSVPFVENVARHVLAGPLVTQLLLPQPQG
DSGSAGAAPRAPSDGAAPSAAASPSPSVVGGAQTAADEGVGQDFSDSNGA
AAAAATTGATGAATTTTTTTGVPAGSVGTGWGDGPRQGGGGAEDDNSWEN
VVYVKVGLEVCDCELGVPLDGGVGADGRSGGQHGIVADGSGSRVAAKLGL
LLADATWTAPAASSAAITEAGGGGGPGGSLSVETLVSSAAVKLEPEGFDL
LEAVHTRVVGRLPLGATGAADPAAPPTGGGDGGGHAAPPRDDDDLAEKLR
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