prot_E-fasciculatus_F_contig1410.3002.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1410.3002.1
Unique Nameprot_E-fasciculatus_F_contig1410.3002.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length491
Homology
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BLAST of mRNA_E-fasciculatus_F_contig1410.3002.1 vs. uniprot
Match: A0A6H5K507_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K507_9PHAE)

HSP 1 Score: 603 bits (1556), Expect = 5.790e-212
Identity = 341/445 (76.63%), Postives = 362/445 (81.35%), Query Frame = 0 
Query:   47 RGNRGASSSPRQILVKVPCVETSHAACGEAEIKSKRRGSAPYRLAWNDEVTTGVDDADNPDADARNATPGHDE-EAAAEDGAGGCGHGGSQVADKAGTGNGDVPLAADATAAAAAGLVPPAAGKKKLTAVMVQLPRPLEGDEATSTXXXXXXXXXXXXXXXXXXFDAGNGPGSNSLLSASDSGRLSLLEETRPTTSRVIAKLRASVAREACRSSAAAKPAPVATAAGGPGCLFPLAVLEVHPGDAAIPGRRPPSSPARRGGPHDGHKRSDGTRGRPRPQSATGLSTAARTSRRTGVQYHGAAEAAGRTREKQRGFANGAATLGPAAAGIARRGAKACETGENMLRANSRRPKSAGTGENIGDRRGREVMAQDNYSFFPSASSAGENAGAECGYEEMGVSLILGGGVILPGDVNEWEASLCSSTEAASRAGYALDSPGTWREAVGF 490
            RGNRGA SSPRQILVKVPCVETS  ACG+AE K KR GSAPYRLAWNDEVTT V  ADNP  DARN   GHD+ +A AEDGAGGC HGG QVA+K+  G GD   AADATAAAAAGLV PA G+  +TAVMVQLPRPLEGDEA+ST                  FD GNG GSNS+LSASDSGRLSLLEE RPTTSRVIAKLRASVAREAC+ S AAK AP ATAA GP CL PL VLEV PGDAAIPGRRPPSSP RR GPHDGHKRS GTRGRPRPQSA GLS AA+TSRR GVQ+HG A A GRTRE +RGF N AATLGPAAA I RRGA AC+T EN+  ANSRRP+SAG GENIGDRR R+V AQDNYSFFPSASS GENAG ECGY+EMGV +ILGGGV+LPGDV+EWEASLCSSTEA SRAGYALDSPGTWREAVGF
Sbjct:   58 RGNRGAPSSPRQILVKVPCVETSRTACGDAEKKCKR-GSAPYRLAWNDEVTTAVAYADNPYVDARNTAHGHDDGKALAEDGAGGCCHGGGQVANKSAKGKGDATRAADATAAAAAGLVSPAPGRNNMTAVMVQLPRPLEGDEASSTTPGGRGVG----------FDVGNGRGSNSVLSASDSGRLSLLEEARPTTSRVIAKLRASVAREACQGSTAAKLAPGATAAAGPACLLPLTVLEVRPGDAAIPGRRPPSSPGRRAGPHDGHKRSVGTRGRPRPQSAAGLSLAAQTSRRIGVQHHGTASAGGRTRENRRGFVNAAATLGPAAAAITRRGATACKTDENVQGANSRRPQSAGPGENIGDRRRRDVKAQDNYSFFPSASSTGENAGTECGYDEMGVRMILGGGVMLPGDVSEWEASLCSSTEATSRAGYALDSPGTWREAVGF 491
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1410.3002.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K507_9PHAE5.790e-21276.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1410contigE-fasciculatus_F_contig1410:13851..15919 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1410.3002.1mRNA_E-fasciculatus_F_contig1410.3002.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1410 10483..15946 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1410.3002.1 ID=prot_E-fasciculatus_F_contig1410.3002.1|Name=mRNA_E-fasciculatus_F_contig1410.3002.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=491bp
MTGGRAGFTCIRLLIADKGRIHRRGGRGGQVRVLAAWSYQASKRHGRGNR
GASSSPRQILVKVPCVETSHAACGEAEIKSKRRGSAPYRLAWNDEVTTGV
DDADNPDADARNATPGHDEEAAAEDGAGGCGHGGSQVADKAGTGNGDVPL
AADATAAAAAGLVPPAAGKKKLTAVMVQLPRPLEGDEATSTTPGGGGGGG
GGGGGGGGGFDAGNGPGSNSLLSASDSGRLSLLEETRPTTSRVIAKLRAS
VAREACRSSAAAKPAPVATAAGGPGCLFPLAVLEVHPGDAAIPGRRPPSS
PARRGGPHDGHKRSDGTRGRPRPQSATGLSTAARTSRRTGVQYHGAAEAA
GRTREKQRGFANGAATLGPAAAGIARRGAKACETGENMLRANSRRPKSAG
TGENIGDRRGREVMAQDNYSFFPSASSAGENAGAECGYEEMGVSLILGGG
VILPGDVNEWEASLCSSTEAASRAGYALDSPGTWREAVGF*
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