prot_E-fasciculatus_F_contig1399.2920.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1399.2920.1
Unique Nameprot_E-fasciculatus_F_contig1399.2920.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length341
Homology
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BLAST of mRNA_E-fasciculatus_F_contig1399.2920.1 vs. uniprot
Match: D8LS79_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS79_ECTSI)

HSP 1 Score: 248 bits (634), Expect = 9.850e-78
Identity = 179/262 (68.32%), Postives = 187/262 (71.37%), Query Frame = 0 
Query:  100 TSLPSSSELCPDETAACYESTLCWDCVAQFEDSSGYCEDRYPVLAAEDDDGCESASALYCCSFDASGQDCLDDTVTLDYFRCGVLEGSGCDLSDSPCGGSXXXXXXXXXXLGTGTSLSPAXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXXXXXXXXESVXXXXXXXXXSWADEND---------------------DSSPSAXXXXXXXXDEENDDLDADSGDTSGAAGTFAAPSPSSSAPSLWVALYCIVLVFTDALARL 340
            T+LPSSSELCPDETAACYESTLCWDCVAQFEDSS YCEDR+PVLAAEDDDGCE+ASALYCCSFDASGQDCLDDTVT+DYFRCGVLEGSGCDLSDSPCGGSXXXXXXXXXX                          XXXXXXXXX XXXXXXX  X ES   XXX    +WAD+                       DSSPS XXX     DEENDDL  DSGD SGAA TFAAPS SSSA SLW ALYCIVLV +DALAR+
Sbjct:   45 TTLPSSSELCPDETAACYESTLCWDCVAQFEDSSEYCEDRFPVLAAEDDDGCEAASALYCCSFDASGQDCLDDTVTVDYFRCGVLEGSGCDLSDSPCGGSXXXXXXXXXXX-------------------------XXXXXXXXXXXXXXXXXADXDESADNXXXADGDAWADDXXXXXXXXXXXXXXXXXXXXXXXDSSPSXXXXGSQSADEENDDLGPDSGDNSGAAWTFAAPSRSSSAVSLWGALYCIVLVVSDALARI 281
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BLAST of mRNA_E-fasciculatus_F_contig1399.2920.1 vs. uniprot
Match: A0A6H5L2W4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2W4_9PHAE)

HSP 1 Score: 233 bits (595), Expect = 1.460e-71
Identity = 174/241 (72.20%), Postives = 181/241 (75.10%), Query Frame = 0 
Query:  100 TSLPSSSELCPDETAACYESTLCWDCVAQFEDSSGYCEDRYPVLAAEDDDGCESASALYCCSFDASGQDCLDDTVTLDYFRCGVLEGSGCDLSDSPCGGSXXXXXXXXXXLGTGTSLSPAXXXXXXXXXXXXXXXXXXXXXXXXXSXXXXXXXXXXXESVXXXXXXXXXSWADENDDSSPSAXXXXXXXXDEENDDLDADSGDTSGAAGTFAAPSPSSSAPSLWVALYCIVLVFTDALARL 340
            TSLPSSSELCPDETAACYESTLCWDCVAQFEDSS YCEDRYPVLAAEDDDGCE+A+ALYCCSFDASG+DCLDDTVT+DYFRC V+E SGCDLSDSPCGGSXXXXXXXXXX          XXXXXXXXXXXX          XXX XXXXXXXXXXX   XX              DSSPS         DEENDDL  DSGDTSGA GTFAA S +SSA  LW AL CIVLV TDALAR+
Sbjct:   75 TSLPSSSELCPDETAACYESTLCWDCVAQFEDSSEYCEDRYPVLAAEDDDGCEAATALYCCSFDASGEDCLDDTVTVDYFRCSVVEVSGCDLSDSPCGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEFADNDESAYXXXXXXXXXXXXXXXXXXXXDY------------DSSPSEDDDGSQSADEENDDLGPDSGDTSGAIGTFAALSRASSAAFLWGALCCIVLVVTDALARI 303
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BLAST of mRNA_E-fasciculatus_F_contig1399.2920.1 vs. uniprot
Match: A0A6H5JEP0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEP0_9PHAE)

HSP 1 Score: 110 bits (276), Expect = 4.400e-24
Identity = 53/88 (60.23%), Postives = 65/88 (73.86%), Query Frame = 0 
Query:  100 TSLPSSS-ELCPDETAACYESTLCWDCVAQF-EDSSGYCEDRYPVLAAEDDDGCESASALYCCSFDASGQDCLDDTVTLDYFRCGVLE 185
            TSLPSSS E C +E AACY+S LCWDCVAQF ED    C +RYP ++      C+ ASAL+CCSF  SGQDCLDD VT+++F+CG+ E
Sbjct:   38 TSLPSSSSEACVEEAAACYDSALCWDCVAQFAEDGVDSCGERYPAMSNSGASDCDVASALFCCSFYVSGQDCLDDAVTMEFFQCGLEE 125
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1399.2920.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LS79_ECTSI9.850e-7868.32Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L2W4_9PHAE1.460e-7172.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JEP0_9PHAE4.400e-2460.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..319
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 339..340
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 320..338

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1399contigE-fasciculatus_F_contig1399:5655..9558 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1399.2920.1mRNA_E-fasciculatus_F_contig1399.2920.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1399 5637..10331 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1399.2920.1 ID=prot_E-fasciculatus_F_contig1399.2920.1|Name=mRNA_E-fasciculatus_F_contig1399.2920.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=341bp
MVGRGRRRQRPCVVRMVADAVPFGGAGQNRGREVTVTRNKKERIDTTTTT
TATTTDGVAVAASTCPEIKKARAAPFRFALPLPLLLVADALRLRLASAST
SLPSSSELCPDETAACYESTLCWDCVAQFEDSSGYCEDRYPVLAAEDDDG
CESASALYCCSFDASGQDCLDDTVTLDYFRCGVLEGSGCDLSDSPCGGSS
SSTTSSDDNLGTGTSLSPADDDESSTPAPAAYDESVVVVVDDDDSYDESV
VVVDDDESVDDDESADDDSWADENDDSSPSADDGGSPSADEENDDLDADS
GDTSGAAGTFAAPSPSSSAPSLWVALYCIVLVFTDALARL*
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