prot_E-fasciculatus_F_contig1360.2679.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1360.2679.1
Unique Nameprot_E-fasciculatus_F_contig1360.2679.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length123
Homology
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BLAST of mRNA_E-fasciculatus_F_contig1360.2679.1 vs. uniprot
Match: A0A6H5JNR4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JNR4_9PHAE)

HSP 1 Score: 219 bits (558), Expect = 6.910e-72
Identity = 114/122 (93.44%), Postives = 119/122 (97.54%), Query Frame = 0 
Query:    1 MSKAAAPARAVASRAAPAAPKRGMAGGAAPKYTGWEAQVREKLPKDEHVVVAISGFYVGLYVVCKGISALFSSPKKKEVAAPVVASSATSSDIPEGYEDNFWQWLEGAGNMEKYLATIDKAQ 122
            MSKAAAPARAVASRAAPA PKRGMAGGAAP+YTGWEAQ+REKLPKDEHVVVAISGFYVGLYV+ KGISALFSSP+K EVAAPVVASSATSSDIP+GYEDNFWQWLEGAGNMEKYLATIDKAQ
Sbjct:    7 MSKAAAPARAVASRAAPAVPKRGMAGGAAPEYTGWEAQIREKLPKDEHVVVAISGFYVGLYVLVKGISALFSSPEK-EVAAPVVASSATSSDIPDGYEDNFWQWLEGAGNMEKYLATIDKAQ 127
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BLAST of mRNA_E-fasciculatus_F_contig1360.2679.1 vs. uniprot
Match: A0A6U4IDD0_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4IDD0_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 1.750e-8
Identity = 37/102 (36.27%), Postives = 53/102 (51.96%), Query Frame = 0 
Query:   20 PKRGMAGGAAPKYTGWEAQ--VREKLPKDEHVVVAISGFYVGLYVVCKGISALFSSPKKKEVAAPVVASSATSSDIPEGYEDNFWQWLEGAGNMEKYLATID 119
            PKR   GGAA +Y        VR+ LP+D HVV+AI G Y  LY++ K    LFS  K          +S +SS +    ++ F +W+   GN+EKY   ++
Sbjct:   28 PKR-FGGGAAVEYEPGSPDYIVRQYLPEDRHVVMAICGGYFSLYLLSK----LFSGGKXXXXXXXXXPASTSSSGVKSMADEGFAEWIAVDGNIEKYFKAVE 124
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BLAST of mRNA_E-fasciculatus_F_contig1360.2679.1 vs. uniprot
Match: A0A7R9UII2_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UII2_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 4.310e-8
Identity = 39/105 (37.14%), Postives = 55/105 (52.38%), Query Frame = 0 
Query:   20 PKRGMAGGAAPKYTGWEAQ--VREKLPKDEHVVVAISGFYVGLYVVCKGISALFSSPKKKEV---AAPVVASSATSSDIPEGYEDNFWQWLEGAGNMEKYLATID 119
            PKR  AGGA  +Y        VR+ LP D+ +VVAI   Y G+Y+    +S LFS   KKE    AAP  A++  +  +    ++ F  W+   GN EKYL + +
Sbjct:   39 PKR-FAGGAPTEYAPGSLDYIVRQYLPHDKQIVVAIVSGYFGIYL----LSTLFSGGSKKEETAEAAPAPAAAPAAGGVLSMEDEGFGDWIMQEGNFEKYLNSFE 138
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1360.2679.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JNR4_9PHAE6.910e-7293.44Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6U4IDD0_9STRA1.750e-836.27Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7R9UII2_9STRA4.310e-837.14Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 49..71
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..48
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 72..122
NoneNo IPR availableTMHMMTMhelixcoord: 49..71

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1360contigE-fasciculatus_F_contig1360:9851..12383 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1360.2679.1mRNA_E-fasciculatus_F_contig1360.2679.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1360 9851..12383 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1360.2679.1 ID=prot_E-fasciculatus_F_contig1360.2679.1|Name=mRNA_E-fasciculatus_F_contig1360.2679.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=123bp
MSKAAAPARAVASRAAPAAPKRGMAGGAAPKYTGWEAQVREKLPKDEHVV
VAISGFYVGLYVVCKGISALFSSPKKKEVAAPVVASSATSSDIPEGYEDN
FWQWLEGAGNMEKYLATIDKAQ*
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