prot_E-fasciculatus_F_contig13533.2630.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig13533.2630.1
Unique Nameprot_E-fasciculatus_F_contig13533.2630.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length176
Homology
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BLAST of mRNA_E-fasciculatus_F_contig13533.2630.1 vs. uniprot
Match: D7FUT7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUT7_ECTSI)

HSP 1 Score: 218 bits (555), Expect = 1.010e-67
Identity = 116/133 (87.22%), Postives = 119/133 (89.47%), Query Frame = 0 
Query:   43 GGGMTLLQAEEXXSSNNGTRARHQTNFILAGACTARAVSLVVVWGTGGWVPFTAVSDLLYIALFGSLILLYCEMRSILAVASSHRAVRLGVFLSLTGVLAVSLVICTARWAADPASRKSLALRKFLYLELGIT 175
            GGGMT      XX   NGTRARHQTNFILAGACTA+A+SL VVWGTGGWVPFTAVSDLLYIALFGSLILLY EMR+ILAVASSHR VRLGVFLSL GVL VSLVICTARWAADPASRKSLALRKFLYLELGIT
Sbjct:   44 GGGMTXXXXXXXXXXXNGTRARHQTNFILAGACTAKAISLGVVWGTGGWVPFTAVSDLLYIALFGSLILLYVEMRNILAVASSHRTVRLGVFLSLAGVLVVSLVICTARWAADPASRKSLALRKFLYLELGIT 176
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13533.2630.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FUT7_ECTSI1.010e-6787.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 89..99
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 69..88
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..68
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 132..154
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 100..120
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 121..131
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 155..175
NoneNo IPR availableTMHMMTMhelixcoord: 131..153
NoneNo IPR availableTMHMMTMhelixcoord: 100..122
NoneNo IPR availableTMHMMTMhelixcoord: 68..90

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13533contigE-fasciculatus_F_contig13533:2749..3598 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13533.2630.1mRNA_E-fasciculatus_F_contig13533.2630.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig13533 2749..3598 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig13533.2630.1 ID=prot_E-fasciculatus_F_contig13533.2630.1|Name=mRNA_E-fasciculatus_F_contig13533.2630.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=176bp
GVSRLLRVVAGGRRVPPPGRYLRVGVPPEQAGIGCRTAPGPAGGGMTLLQ
AEEEESSNNGTRARHQTNFILAGACTARAVSLVVVWGTGGWVPFTAVSDL
LYIALFGSLILLYCEMRSILAVASSHRAVRLGVFLSLTGVLAVSLVICTA
RWAADPASRKSLALRKFLYLELGIT*
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