prot_E-fasciculatus_F_contig13406.2553.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig13406.2553.1
Unique Nameprot_E-fasciculatus_F_contig13406.2553.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length83
Homology
BLAST of mRNA_E-fasciculatus_F_contig13406.2553.1 vs. uniprot
Match: D7FI53_ECTSI (SMK-1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI53_ECTSI)

HSP 1 Score: 167 bits (424), Expect = 2.670e-47
Identity = 80/83 (96.39%), Postives = 81/83 (97.59%), Query Frame = 0
Query:    1 VAPRDAFYRHLWDEVPLFEVFIPVLKDPAASVMERTACMEVLLASLTHDPALFRTHILKEGGHPLLPPTVNNQAKSTSAAGGG 83
            VAPRDAFYRHLWDEVPLFEVFIPVLKDP ASVMERTACMEVLLASLTHDPALFRTHILKEGGHPLLPPTVNNQAKSTS+A GG
Sbjct:  329 VAPRDAFYRHLWDEVPLFEVFIPVLKDPDASVMERTACMEVLLASLTHDPALFRTHILKEGGHPLLPPTVNNQAKSTSSAAGG 411          
BLAST of mRNA_E-fasciculatus_F_contig13406.2553.1 vs. uniprot
Match: A0A7S3YI92_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YI92_HETAK)

HSP 1 Score: 80.9 bits (198), Expect = 4.720e-16
Identity = 40/83 (48.19%), Postives = 53/83 (63.86%), Query Frame = 0
Query:    4 RDAFYRHLWDEVPLFEVFIPVLKDPAASVMERTACMEVLLASLTHDPALFRTHILKEGGHPLLPP---TVNNQAKSTSAAGGG 83
            RD FYR+L  E   F+VF+ VL D  A++  R  CMEVL+ASL HDP+L R +IL++GGHP LP    + +   +   A GGG
Sbjct:  338 RDQFYRYLQSECLFFDVFVTVLADEEATIPARLCCMEVLVASLFHDPSLLRNYILQKGGHPPLPTNFGSASQAGRKDEAKGGG 420          
BLAST of mRNA_E-fasciculatus_F_contig13406.2553.1 vs. uniprot
Match: A0A7S0U7C8_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0U7C8_HEMAN)

HSP 1 Score: 48.1 bits (113), Expect = 3.340e-5
Identity = 28/61 (45.90%), Postives = 37/61 (60.66%), Query Frame = 0
Query:    6 AFYRHLWDEVPLFEVFIPVLKDPAASVMERTACMEVLLASLTHDPALFRTHILKEGGHPLL 66
            AFYR L  +  LF +F   L    A V  R+AC ++LL +L HDP+L R ++LKE G  LL
Sbjct:   28 AFYRSLCSQ-GLFGIFQGGLSAEDAGV--RSACTDILLCTLNHDPSLLREYVLKESGGSLL 85          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13406.2553.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FI53_ECTSI2.670e-4796.39SMK-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A7S3YI92_HETAK4.720e-1648.19Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S0U7C8_HEMAN3.340e-545.90Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13406contigE-fasciculatus_F_contig13406:3..1493 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13406.2553.1mRNA_E-fasciculatus_F_contig13406.2553.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig13406 3..1493 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig13406.2553.1 ID=prot_E-fasciculatus_F_contig13406.2553.1|Name=mRNA_E-fasciculatus_F_contig13406.2553.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=83bp
VAPRDAFYRHLWDEVPLFEVFIPVLKDPAASVMERTACMEVLLASLTHDP
ALFRTHILKEGGHPLLPPTVNNQAKSTSAAGGG
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