prot_E-fasciculatus_F_contig1340.2551.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1340.2551.1
Unique Nameprot_E-fasciculatus_F_contig1340.2551.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length236
Homology
BLAST of mRNA_E-fasciculatus_F_contig1340.2551.1 vs. uniprot
Match: A0A6H5JFL6_9PHAE (tRNA(Ile)-lysidine synthetase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFL6_9PHAE)

HSP 1 Score: 404 bits (1039), Expect = 4.950e-139
Identity = 200/235 (85.11%), Postives = 207/235 (88.09%), Query Frame = 0
Query:    1 VPSLLLRHRLGRGIAANTDNSPLSYANLRLLMRQVDGGDRKWSISLGGAYYLRRVGDLLRIEQSPADGGSMVSGLEGRTVSEQGIVRRSADAATTPWEMVVSPWRKGGSVGSDEGGGDGHEEGRAMGAGMVLFNVAAGARLHVRRKKDGDRFRPAWRDRPAKLKDFLRGQGVPLHRRDEVALICDHHDAVIAVYPSYPGFGVCQDGTGEEPIRVRIAGTPLFCPRPEDRGGAPTS 235
            +P L+    L R I ANT NSPLSYANLRLLMRQVDGGDRKWSISL G YYLRRVGDLLRIEQSPADGG +VSGLEGR VSEQGIVR S DAATTPWEMVVSPW +GGS+     G  GH EGRA  AGMVLFNVAAGARLHVRRKKDGDRF+PAWRDRPAKLKDFLRGQGVPLHRRDEVALICDHHD+VIAVYPSYPGFGVCQD TGEEPIRVRIAGTPLFCPRPEDRGGAP S
Sbjct:  170 LPELVREELLHRFIVANTGNSPLSYANLRLLMRQVDGGDRKWSISLEGGYYLRRVGDLLRIEQSPADGGIIVSGLEGRVVSEQGIVRHSTDAATTPWEMVVSPWGEGGSIALGGEGDSGHGEGRATEAGMVLFNVAAGARLHVRRKKDGDRFQPAWRDRPAKLKDFLRGQGVPLHRRDEVALICDHHDSVIAVYPSYPGFGVCQDSTGEEPIRVRIAGTPLFCPRPEDRGGAPAS 404          
BLAST of mRNA_E-fasciculatus_F_contig1340.2551.1 vs. uniprot
Match: D7FGW8_ECTSI (tRNA(Ile)-lysidine synthetase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGW8_ECTSI)

HSP 1 Score: 335 bits (859), Expect = 6.820e-110
Identity = 172/206 (83.50%), Postives = 176/206 (85.44%), Query Frame = 0
Query:   36 DGGDRKWSIS----LGGAYYLRR--VGDLLRIEQSPADGGSMVSGLEGRTVSEQGIVRRSADAATTPWEMVVSPWRKGGSVGSDEGGGDGHEEGRAMGAGMVLFNVAAGARLHVRRKKDGDRFRPAWRDRPAKLKDFLRGQGVPLHRRDEVALICDHHDAVIAVYPSYPGFGVCQDGTGEEPIRVRIAGTPLFCPRPEDRGGAPTS 235
            DG ++ W+ S    L     L R  VGDLLRIEQSPADGG MVSGLEGRTVSEQGIVR S DAA TPWEMVVSPW +GGSVG  E G  GH EGRA  AGMVLFNVAAGARLHVRRKKDGDRFRPAWRDRPAKLKDFLRGQGVPLHRRDEVALICDHHDAVIAVYPSYPGFGVCQD TGEEPIRVRIAGTPLFCPRPEDRGGAP S
Sbjct:  337 DGSEQGWAGSDLPELVREELLHRFIVGDLLRIEQSPADGGIMVSGLEGRTVSEQGIVRHSTDAAITPWEMVVSPWGEGGSVGLGEEGDSGHGEGRATEAGMVLFNVAAGARLHVRRKKDGDRFRPAWRDRPAKLKDFLRGQGVPLHRRDEVALICDHHDAVIAVYPSYPGFGVCQDSTGEEPIRVRIAGTPLFCPRPEDRGGAPAS 542          
BLAST of mRNA_E-fasciculatus_F_contig1340.2551.1 vs. uniprot
Match: A0A4D9DAX5_9STRA (tRNA(Ile)-lysidine synthetase n=4 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DAX5_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 4.020e-18
Identity = 80/243 (32.92%), Postives = 109/243 (44.86%), Query Frame = 0
Query:    1 VPSLLLRHRLGRGIAANTDNS-PLSYANLRLLMRQVD-------GGDRK---WSISLGGAYYLRRVGDLLRIEQSPADGGSMVSGLEGRTVSEQGIVRRSADAAT-----TPWEMVVSPWRKGGSVGSDEGGGDGHEEGRAMGAGMVLFNVAAGARLHVRRKKDGDRFRPAWRDRPAKLKDFLRGQGVPLHRRDEVALIC-------DHHDAVIAVYP----SYPGFGVCQDGTGEEPIRVRI 216
            +P LL    L R +A  ++ +  LSYA +R  M Q+        GG +K   W + +G  + L R G +LR+ Q  A         +G    E   V    DA       T W++  S      S  S            A G  MVL +V  GARL +R +++GDRF P WR  P KLKDFLR Q VPLHRRDEV LI           + VI ++P    + P        +  EP+ +R+
Sbjct:  434 LPRLLQEELLHRLVARASNGAVSLSYAQIRRAMEQLQRDEEEAQGGHKKKLQWRLEMGNGWLLVRQGQVLRLVQEQAHRNP-----KGNWQQENFPVSLP-DAGVECLLPTGWQISASRLSASPSSSSSS----------APGWSMVLPHVPMGARLRLRNRQEGDRFHPPWRQSPVKLKDFLRAQNVPLHRRDEVMLIVLLSNGPLGVKEEVIGLHPLGCVAAPSLDSQATNSALEPLAIRL 660          
BLAST of mRNA_E-fasciculatus_F_contig1340.2551.1 vs. uniprot
Match: A0A835Z1B5_9STRA (tRNA(Ile)-lysidine synthetase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1B5_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 5.670e-18
Identity = 61/173 (35.26%), Postives = 81/173 (46.82%), Query Frame = 0
Query:   38 GDRKWSISLGGAYYLRRVGDLLRIEQSPADG--------------------GSMVSGLEGRTVSEQGIVRRSADAATTPWEMV---VSPWRKGGSVGSDEGGGDGHEEGRAMG----AGMVLFNVAAGARLHVRRKKDGDRFRPAWRDRPAKLKDFLRGQGVPLHRRDEVALI 183
            G  +W + +GG   + R GD+LR+  +                        G   +G     V+      R    A   WE+    +      G   +   G  G +   A      + MVL+NV  GA L VRR++DGDRFRP WR  PAK+KDFLRGQGVPLHRRD+VAL+
Sbjct:  477 GSARWHVDVGGGAAVMRDGDVLRLAHAMGAAXXXXXXXXXXXXXXXXXXXXGERTAGCVAGEVTVDEAEARCTITAPPDWEVTATRIGVAEAAGIAAAARDGTSGADRPPAXXXXXXSDMVLYNVPPGAVLRVRRRRDGDRFRPRWRATPAKVKDFLRGQGVPLHRRDDVALV 649          
BLAST of mRNA_E-fasciculatus_F_contig1340.2551.1 vs. uniprot
Match: A0A8J5XS81_DIALT (tRNA(Ile)-lysidine synthetase n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XS81_DIALT)

HSP 1 Score: 84.0 bits (206), Expect = 6.200e-15
Identity = 67/217 (30.88%), Postives = 100/217 (46.08%), Query Frame = 0
Query:   24 SYANLRLLMRQVDGGDRKWSISLGGAYYLRRVGDLLRIEQSPADGGSMVSGLEGRTVSEQGIVRRSADAATT---PWEMVVSPWRKGGSVGSDEGGGDGHEEGRAMGAGMV-LFNVAAGARLHVRRKKDGDRFRPAWRDRPAKLKDFLRGQGVPLHRRDEVALICDHHD---------------------AVIAVYPSYPGFGVCQDGTGEEPIRVR 215
            +YA +R  + ++   + +  + L G + LRR G+   +  S    G++     GR   E G    +A +A       + VV+  R+G  V         HE      A  + L+NV  G+RL VR +++GD F PAWR+RP KLKDFLRGQ VPLH R++V LI    +                      V+AVYP++ G     D     P+  +
Sbjct:  392 TYAEVRRALDRLRSPNAQSDLHLAGGWLLRRNGNKALVLPS---NGALGLAPRGRGALETGAWAAAAGSAVCVAHAADCVVNV-REGEEV---------HETDETDDAPTITLYNVPPGSRLRVRARREGDTFTPAWRERPVKLKDFLRGQKVPLHARNDVRLIAWDEERTDGTNGQPIGAGRADASTSPTVLAVYPTHVGRACAHDEGVHPPLSAK 595          
BLAST of mRNA_E-fasciculatus_F_contig1340.2551.1 vs. uniprot
Match: A0A7S1J5B6_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1J5B6_9EUGL)

HSP 1 Score: 78.6 bits (192), Expect = 6.270e-15
Identity = 42/89 (47.19%), Postives = 53/89 (59.55%), Query Frame = 0
Query:   96 PWEMVVSPWRKGGSVGSDEGGGDGHEEGRAMGAGMVLFNVAAGARLHVRRKKDGDRFRPAWRDRPAKLKDFLRGQGVPLHRRDEVALIC 184
            P E+VV   R     G+ +G  +     +A    MV++NV  GA L VR ++ GDRF P WR    KLKDFLRGQGVPLH RD V ++C
Sbjct:   19 PPELVVHAHRPDPGAGAGQGSPE-----QASPGPMVIYNVPFGAALEVRYRRPGDRFHPPWRPSAVKLKDFLRGQGVPLHERDRVPVLC 102          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1340.2551.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5JFL6_9PHAE4.950e-13985.11tRNA(Ile)-lysidine synthetase n=1 Tax=Ectocarpus s... [more]
D7FGW8_ECTSI6.820e-11083.50tRNA(Ile)-lysidine synthetase n=1 Tax=Ectocarpus s... [more]
A0A4D9DAX5_9STRA4.020e-1832.92tRNA(Ile)-lysidine synthetase n=4 Tax=Monodopsidac... [more]
A0A835Z1B5_9STRA5.670e-1835.26tRNA(Ile)-lysidine synthetase n=1 Tax=Tribonema mi... [more]
A0A8J5XS81_DIALT6.200e-1530.88tRNA(Ile)-lysidine synthetase n=1 Tax=Diacronema l... [more]
A0A7S1J5B6_9EUGL6.270e-1547.19Hypothetical protein (Fragment) n=1 Tax=Eutreptiel... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012796Lysidine-tRNA(Ile) synthetase, C-terminalSMARTSM00977TilS_C_a_2_acoord: 141..216
e-value: 2.1E-11
score: 53.9
IPR012796Lysidine-tRNA(Ile) synthetase, C-terminalPFAMPF11734TilS_Ccoord: 141..209
e-value: 1.6E-9
score: 37.0
IPR012796Lysidine-tRNA(Ile) synthetase, C-terminalTIGRFAMTIGR02433TIGR02433coord: 141..186
e-value: 2.2E-7
score: 28.2
NoneNo IPR availableSUPERFAMILY56037PheT/TilS domaincoord: 138..203

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1340contigE-fasciculatus_F_contig1340:16304..18577 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1340.2551.1mRNA_E-fasciculatus_F_contig1340.2551.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1340 16304..18577 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1340.2551.1 ID=prot_E-fasciculatus_F_contig1340.2551.1|Name=mRNA_E-fasciculatus_F_contig1340.2551.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=236bp
VPSLLLRHRLGRGIAANTDNSPLSYANLRLLMRQVDGGDRKWSISLGGAY
YLRRVGDLLRIEQSPADGGSMVSGLEGRTVSEQGIVRRSADAATTPWEMV
VSPWRKGGSVGSDEGGGDGHEEGRAMGAGMVLFNVAAGARLHVRRKKDGD
RFRPAWRDRPAKLKDFLRGQGVPLHRRDEVALICDHHDAVIAVYPSYPGF
GVCQDGTGEEPIRVRIAGTPLFCPRPEDRGGAPTS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012796Lysidine-tRNA-synth_C