prot_E-fasciculatus_F_contig13382.2531.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig13382.2531.1
Unique Nameprot_E-fasciculatus_F_contig13382.2531.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length208
Homology
BLAST of mRNA_E-fasciculatus_F_contig13382.2531.1 vs. uniprot
Match: D8LQ16_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ16_ECTSI)

HSP 1 Score: 362 bits (929), Expect = 5.000e-121
Identity = 185/207 (89.37%), Postives = 185/207 (89.37%), Query Frame = 0
Query:    1 MYCVRPKGETTPPSPGKEGSLGAVGGAARAGSDVGEGGFGEGSHTLGRVEVCWRTTTGESGSIRGGPVVFEAPDRPEVEVTVDGLPDVLKLGRVAECVATVRNRSNRPMTLQLQFRTDGMVGVYVHGQSFRNLGELSPGAFVRCPLQLLALVAGLHELRGCTVADMHTAQEFAQGKLRDILVEFPNEEDDEAVVVVGGRGDHPVPGL 207
            MY VRPK ETTPP PGKEG L AV G ARAG D GEGGFGEGSHTLGRVEVCWRTTTGESGSIRGGPVVFEAPDRPEVEVTVDGLPDVLKLGRVAECVATVRNRSNRPMTLQLQFRTDGMVGVYVHGQSFRNLGEL PG FVRCPLQLLALVAGLHELRGCTVADMHTAQEFAQGKLRDILVEFPNEEDDE          H VPGL
Sbjct:  339 MYSVRPKEETTPPPPGKEGYLDAVRGDARAGGDAGEGGFGEGSHTLGRVEVCWRTTTGESGSIRGGPVVFEAPDRPEVEVTVDGLPDVLKLGRVAECVATVRNRSNRPMTLQLQFRTDGMVGVYVHGQSFRNLGELLPGTFVRCPLQLLALVAGLHELRGCTVADMHTAQEFAQGKLRDILVEFPNEEDDE----------HAVPGL 535          
BLAST of mRNA_E-fasciculatus_F_contig13382.2531.1 vs. uniprot
Match: A0A835ZFD5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFD5_9STRA)

HSP 1 Score: 166 bits (420), Expect = 1.210e-45
Identity = 78/143 (54.55%), Postives = 103/143 (72.03%), Query Frame = 0
Query:   42 GSHTLGRVEVCWRTTTGESGSIRGGPVVFEAPDRPEVEVTVDGLPDVLKLGRVAECVATVRNRSNRPMTLQLQFRTDGMVGVYVHGQSFRNLGELSPGAFVRCPLQLLALVAGLHELRGCTVADMHTAQEFAQGKLRDILVEF 184
            G+HTLG +E+ WRTT GESGS+  GP+V +   +  VEV ++GL    +LG VA   A V N S+R M LQLQFR++ M GVYVHG+SFRNLGE++P   +RCP+Q L LV G+H++ GC + DM TAQE+ QGKL D+ VE+
Sbjct:  323 GTHTLGHIELSWRTTMGESGSVLSGPLVCDVQGKEGVEVILEGLSRAARLGEVAAATAVVTNVSDRSMHLQLQFRSEAMAGVYVHGRSFRNLGEVAPYQELRCPVQFLPLVGGVHQVLGCVIVDMQTAQEYPQGKLGDVFVEW 465          
BLAST of mRNA_E-fasciculatus_F_contig13382.2531.1 vs. uniprot
Match: A0A6H5K843_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K843_9PHAE)

HSP 1 Score: 145 bits (366), Expect = 4.580e-38
Identity = 72/85 (84.71%), Postives = 75/85 (88.24%), Query Frame = 0
Query:    1 MYCVRPKGETTPPSPGKEGSLGAVGGAARAGSDVGEGGFGEGSHTLGRVEVCWRTTTGESGSIRGGPVVFEAPDRPEVEVTVDGL 85
            MY VRP+ ETT P PG+EGSLGAVGGAARAG D GEGGFGEGSHTLGRVEVCWRTTTGESGSIRGGPVVFEAPDRPEVE    G+
Sbjct:  340 MYSVRPREETTSPPPGREGSLGAVGGAARAGGDAGEGGFGEGSHTLGRVEVCWRTTTGESGSIRGGPVVFEAPDRPEVEGANSGV 424          
BLAST of mRNA_E-fasciculatus_F_contig13382.2531.1 vs. uniprot
Match: A0A7S3Y237_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y237_HETAK)

HSP 1 Score: 120 bits (301), Expect = 1.760e-30
Identity = 61/141 (43.26%), Postives = 86/141 (60.99%), Query Frame = 0
Query:   46 LGRVEVCWRTTTGESGSIRGGPVVFEAPDRPEVEVTVDGLPDVLKLGRVAECVATVRNRSNRPMTLQLQFRTDGMVGVYVHGQSFRNLGELSPGAFVRCPLQLLALVAGLHELRGCTVADMHTAQEFAQGKLRDILVEFPN 186
            LG++ + W T  GE G I   P+V++ P   +VEV  +GL   + LG+ +     + NR+ +PM LQ+QFR D MVGVY+ G+SFRNLG +SPG  V     L+  V GLH  RG  V ++ T QE+ QG + DI V+ P+
Sbjct:   46 LGQLNISWTTAMGERGRILSSPIVYKLPPTQDVEVQFEGLQKFV-LGQASPIKCKITNRTEKPMHLQIQFRLDAMVGVYIMGKSFRNLGLVSPGQTVVSEAHLMPTVGGLHPFRGVFVVNLDTYQEYDQGIVCDIFVDSPH 185          
BLAST of mRNA_E-fasciculatus_F_contig13382.2531.1 vs. uniprot
Match: A0A067BMW3_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BMW3_SAPPC)

HSP 1 Score: 89.0 bits (219), Expect = 2.690e-17
Identity = 46/141 (32.62%), Postives = 79/141 (56.03%), Query Frame = 0
Query:   42 GSHTLGRVEVCWRTTTGESGSIRGGPVVFEAPDRPEVEVTVDGLPDVLKLGRVAECVATVRNRSNRPMTLQLQFRTDGMVGVYVHGQSFRNLGELSPGAFVRCPLQLLALVAGLHELRGCTVADMHTAQEFAQGKLRDILV 182
            G+  LGR+EV W+++ GE+GS++  PV+ +     E  V++      L++G+       V+N   RPM LQLQ R + M G+     S +N+G +S     +  ++LL L+AGL +++G  + ++ T  E+ Q K   +LV
Sbjct:  238 GTLNLGRLEVAWKSSMGEAGSLQTQPVMRKVGSLKEASVSIVVPTQPLRVGQPFVATFVVQNNGTRPMNLQLQLRRELMTGIVCSALSHQNVGVVSTNGCTQLDVELLPLIAGLQQIQGVFIVELETLVEYPQEKTLHLLV 378          
BLAST of mRNA_E-fasciculatus_F_contig13382.2531.1 vs. uniprot
Match: W7TGS3_9STRA (Uncharacterized protein n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7TGS3_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 3.870e-15
Identity = 56/166 (33.73%), Postives = 83/166 (50.00%), Query Frame = 0
Query:   46 LGRVEVCWRTTTGESGSIRGGPVVFE---APDRPEVEV------------------TVDGLPD--------VLKLGRVAECVATVRNRSNRPMTLQLQFRTDGMVGVYVHGQSFRNLGELSPGAFVRCPLQLLALVAGLHELRGCTVADMHTAQEFAQGKLRDILV 182
            LG++ V WRTT GESG++    V      A   P VE+                  +VD  P         VL  G+V     T+ N +++ + LQ+QF  D M GVY+ G+SF+N G++            L L+AGLH+++G T+ DM TAQE+ Q +L  ++V
Sbjct:  387 LGQLRVSWRTTLGESGTLLSPLVECSSAVASTAPPVELRLSRPLRALRREGDSETSSVDVKPAKDDQEGAAVLVQGQVYAAHCTLYNNTDKDIWLQVQFHLDAMQGVYITGKSFQNAGQVRSHGTQNLLFHFLPLMAGLHDVKGITILDMVTAQEYHQDRLCQVMV 552          
BLAST of mRNA_E-fasciculatus_F_contig13382.2531.1 vs. uniprot
Match: A0A6I9N6H0_9TELE (Trafficking protein particle complex subunit 13 n=6 Tax=Notothenioidei TaxID=8205 RepID=A0A6I9N6H0_9TELE)

HSP 1 Score: 74.7 bits (182), Expect = 3.490e-12
Identity = 40/145 (27.59%), Postives = 74/145 (51.03%), Query Frame = 0
Query:   41 EGSHTLGRVEVCWRTTTGESGSIRGGPVVFEAPDRPEVEVTVDGLPDVLKLGRVAECVATVRNRSNRPMTLQLQFRTDGMVGVYVHGQSFRNLGELSPGAFVRCPLQLLALVAGLHELRGCTVADMHTAQEFAQGKLRDILVEFP 185
            +G   +G++++ W+T  GE G ++   +   AP   ++ ++++ +PD + L    + +  + N S R M L+L+        ++  G S R LG+LSPGAF+  PL LL+ V GL  + G  + D    + +    +  + V  P
Sbjct:  258 KGVTVIGKLDIVWKTNLGERGRLQTSQLQRMAPGYGDIRLSLEMIPDTVNLEEPFDIICKITNCSERTMDLELEMMNTR--SIHWCGVSGRQLGKLSPGAFLSLPLILLSSVQGLQSISGLRLTDTFLKRTYEYDDIAQVCVVCP 400          
BLAST of mRNA_E-fasciculatus_F_contig13382.2531.1 vs. uniprot
Match: A0A8C2ZNK1_CYCLU (Trafficking protein particle complex subunit 13 n=2 Tax=Percomorphaceae TaxID=1489872 RepID=A0A8C2ZNK1_CYCLU)

HSP 1 Score: 74.7 bits (182), Expect = 3.550e-12
Identity = 40/145 (27.59%), Postives = 74/145 (51.03%), Query Frame = 0
Query:   41 EGSHTLGRVEVCWRTTTGESGSIRGGPVVFEAPDRPEVEVTVDGLPDVLKLGRVAECVATVRNRSNRPMTLQLQFRTDGMVGVYVHGQSFRNLGELSPGAFVRCPLQLLALVAGLHELRGCTVADMHTAQEFAQGKLRDILVEFP 185
            +G   +G++++ W+T  GE G ++   +   AP   ++ ++++ +PD + L    + +  + N S R M L+L+        ++  G S R LG+LSPGAF+  PL LL+ V GL  + G  + D    + +    +  + V  P
Sbjct:  264 KGVTVIGKLDIVWKTNLGERGRLQTSQLQRMAPGYGDIRLSLEMIPDTVNLEEPFDIICKITNCSERTMDLELEMCNTR--SIHWCGVSGRQLGKLSPGAFLSLPLTLLSSVQGLQSISGLRLTDTFLKRTYEYDDIAQVCVVCP 406          
BLAST of mRNA_E-fasciculatus_F_contig13382.2531.1 vs. uniprot
Match: A0A0P1B4S8_PLAHL (Uncharacterized conserved protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B4S8_PLAHL)

HSP 1 Score: 73.9 bits (180), Expect = 7.050e-12
Identity = 45/152 (29.61%), Postives = 77/152 (50.66%), Query Frame = 0
Query:   41 EGSHTLGRVEVCWRTTTGESGSIRGGPVVFEAPD-----RPEVEVTVDGLPDVLKLGRVAECVATVRNRSNRPMTLQLQFRTDGMVGVYVHGQSFRNLGELSPGAFVRCPLQLLALVAGLHELRGCTVADMHTAQEFAQG-KLRDILVEFPN 186
            +GS +LGR+ V W+T+ GE+GS++   V+ +  D        V + +  +P  + +G+      +V N + + +TLQLQ+R + M G+     S++ L  L P        + L +V GL  L G    D+H+ QE  Q  +L  + V  P+
Sbjct:  290 QGSQSLGRLHVGWKTSMGEAGSVQSQLVMRKLSDTVAARNSNVMIAITEVPKEVAVGQPFIAAISVTNNTAKSLTLQLQYRKEMMRGIVCSSLSYQTLDLLEPKTMTIVWKEFLPIVGGLQVLGGPVCVDIHSGQELTQSVELAHVFVVSPS 441          
BLAST of mRNA_E-fasciculatus_F_contig13382.2531.1 vs. uniprot
Match: A0A669FAQ1_ORENI (Trafficking protein particle complex subunit 13 n=7 Tax=Cichlidae TaxID=8113 RepID=A0A669FAQ1_ORENI)

HSP 1 Score: 73.6 bits (179), Expect = 8.380e-12
Identity = 40/145 (27.59%), Postives = 73/145 (50.34%), Query Frame = 0
Query:   41 EGSHTLGRVEVCWRTTTGESGSIRGGPVVFEAPDRPEVEVTVDGLPDVLKLGRVAECVATVRNRSNRPMTLQLQFRTDGMVGVYVHGQSFRNLGELSPGAFVRCPLQLLALVAGLHELRGCTVADMHTAQEFAQGKLRDILVEFP 185
            +G   +G++++ W+T  GE G ++   +   AP   ++ +++D +PD + L    + +  + N S R M L L+        ++  G S R LG+LSPGAF+  PL +L+ V GL  + G  + D    + +    +  + V  P
Sbjct:  242 KGVTVIGKLDIVWKTNLGERGRLQTSQLQRMAPGYGDIRLSLDLIPDTVNLEEPFDIICKITNCSERTMDLVLEMCNTS--SIHWCGISGRQLGKLSPGAFLSLPLTVLSSVQGLQSISGLRLTDTFLKRTYEYDDIAQVCVVCP 384          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13382.2531.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQ16_ECTSI5.000e-12189.37Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZFD5_9STRA1.210e-4554.55Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5K843_9PHAE4.580e-3884.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3Y237_HETAK1.760e-3043.26Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A067BMW3_SAPPC2.690e-1732.62Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
W7TGS3_9STRA3.870e-1533.73Uncharacterized protein n=4 Tax=Monodopsidaceae Ta... [more]
A0A6I9N6H0_9TELE3.490e-1227.59Trafficking protein particle complex subunit 13 n=... [more]
A0A8C2ZNK1_CYCLU3.550e-1227.59Trafficking protein particle complex subunit 13 n=... [more]
A0A0P1B4S8_PLAHL7.050e-1229.61Uncharacterized conserved protein n=1 Tax=Plasmopa... [more]
A0A669FAQ1_ORENI8.380e-1227.59Trafficking protein particle complex subunit 13 n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010378Trafficking protein particle complex subunit 13PANTHERPTHR13134UNCHARACTERIZEDcoord: 34..183

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13382contigE-fasciculatus_F_contig13382:122..2648 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13382.2531.1mRNA_E-fasciculatus_F_contig13382.2531.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig13382 2..2664 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig13382.2531.1 ID=prot_E-fasciculatus_F_contig13382.2531.1|Name=mRNA_E-fasciculatus_F_contig13382.2531.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=208bp
MYCVRPKGETTPPSPGKEGSLGAVGGAARAGSDVGEGGFGEGSHTLGRVE
VCWRTTTGESGSIRGGPVVFEAPDRPEVEVTVDGLPDVLKLGRVAECVAT
VRNRSNRPMTLQLQFRTDGMVGVYVHGQSFRNLGELSPGAFVRCPLQLLA
LVAGLHELRGCTVADMHTAQEFAQGKLRDILVEFPNEEDDEAVVVVGGRG
DHPVPGL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010378TRAPPC13