prot_E-fasciculatus_F_contig13378.2529.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig13378.2529.1
Unique Nameprot_E-fasciculatus_F_contig13378.2529.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length164
Homology
BLAST of mRNA_E-fasciculatus_F_contig13378.2529.1 vs. uniprot
Match: D7G3C7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3C7_ECTSI)

HSP 1 Score: 312 bits (800), Expect = 3.230e-104
Identity = 154/159 (96.86%), Postives = 157/159 (98.74%), Query Frame = 0
Query:    6 MFSFPNVKPIWIRYLERFVERYGGSKLERARDLFEQAVEKVPEKDAGDLYIRYAKLEETHGLMRHAASVLDRACAAVEESEKLDMFRLYVAKVESWYGVTQTRQVYEKAIKDLNEEGAREMCLAFATVEQKLGEVDRARAVLTYGSQFADPRRAEPYWQ 164
            MFSFPNVKPIWIRYLERFVERYGGSKLERARDLFEQAVEKVPEKDAGDLYIRYAKLEETHGLMRHAASVLDRACAAVEESE+LDMFRLYVAKVESWYGVTQTRQVYEKAIKDLNEEGAREMCL+FA VEQKLGE+DRARAV TYGSQFADPRRAEPYWQ
Sbjct:    1 MFSFPNVKPIWIRYLERFVERYGGSKLERARDLFEQAVEKVPEKDAGDLYIRYAKLEETHGLMRHAASVLDRACAAVEESERLDMFRLYVAKVESWYGVTQTRQVYEKAIKDLNEEGAREMCLSFAAVEQKLGEIDRARAVWTYGSQFADPRRAEPYWQ 159          
BLAST of mRNA_E-fasciculatus_F_contig13378.2529.1 vs. uniprot
Match: A0A7S2W251_9STRA (Glycine--tRNA ligase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W251_9STRA)

HSP 1 Score: 199 bits (507), Expect = 1.760e-56
Identity = 91/163 (55.83%), Postives = 131/163 (80.37%), Query Frame = 0
Query:    2 QGVSMFSFPNVKPIWIRYLERFVERYGGSKLERARDLFEQAVEKVPEKDAGDLYIRYAKLEETHGLMRHAASVLDRACAAVEESEKLDMFRLYVAKVESWYGVTQTRQVYEKAIKDLNEEGAREMCLAFATVEQKLGEVDRARAVLTYGSQFADPRRAEPYWQ 164
            +GV+ F +P+VK +W +YL+RF++RY G KLERARDLFEQA++  P   + +L+++YAKLEE HGL+RHA +V DRA  AVEE+++ DM+ LY+ K ES+YGVT+TRQ+YE+AIK L +  A++M + +ATVE+KLGE+DRARA+ T+GSQF +P+R   +W+
Sbjct:  569 KGVAAFRWPHVKALWHQYLDRFIKRYAGDKLERARDLFEQALKDCPADTSAELFLKYAKLEEQHGLVRHAMAVYDRAVQAVEEAQRFDMYMLYIRKAESFYGVTRTRQIYEQAIKLLPDVDAQKMAVQYATVEKKLGEIDRARAIFTHGSQFTNPKREPEFWK 731          
BLAST of mRNA_E-fasciculatus_F_contig13378.2529.1 vs. uniprot
Match: UPI001EECC3A9 (pre-mRNA-splicing factor syf1 homolog n=1 Tax=Homalodisca vitripennis TaxID=197043 RepID=UPI001EECC3A9)

HSP 1 Score: 187 bits (475), Expect = 1.290e-55
Identity = 92/163 (56.44%), Postives = 114/163 (69.94%), Query Frame = 0
Query:    2 QGVSMFSFPNVKPIWIRYLERFVERYGGSKLERARDLFEQAVEKVPEKDAGDLYIRYAKLEETHGLMRHAASVLDRACAAVEESEKLDMFRLYVAKVESWYGVTQTRQVYEKAIKDLNEEGAREMCLAFATVEQKLGEVDRARAVLTYGSQFADPRRAEPYWQ 164
            +G+++F +PNV  IW  YL +F+ RYGG+KLERARDLFEQ VE  P K A  LY+ YAKLEE HGL RHA +V +RA AAV   E  ++F +Y+ K    YGV QTRQ+YEKAI  L E+  REMCL FA +E KLGE+DRARA+  + SQ  DPR    +WQ
Sbjct:   33 KGIALFKWPNVYDIWNTYLTKFLNRYGGTKLERARDLFEQCVENCPPKFAKALYLLYAKLEEDHGLARHAMAVYERATAAVLPEEMFELFNIYIKKAAEIYGVPQTRQIYEKAIDVLQEDNCREMCLRFAEMETKLGEIDRARAIYAHCSQICDPRVTAEFWQ 195          
BLAST of mRNA_E-fasciculatus_F_contig13378.2529.1 vs. uniprot
Match: C3Z7Y5_BRAFL (Uncharacterized protein n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3Z7Y5_BRAFL)

HSP 1 Score: 189 bits (481), Expect = 6.080e-55
Identity = 91/163 (55.83%), Postives = 118/163 (72.39%), Query Frame = 0
Query:    2 QGVSMFSFPNVKPIWIRYLERFVERYGGSKLERARDLFEQAVEKVPEKDAGDLYIRYAKLEETHGLMRHAASVLDRACAAVEESEKLDMFRLYVAKVESWYGVTQTRQVYEKAIKDLNEEGAREMCLAFATVEQKLGEVDRARAVLTYGSQFADPRRAEPYWQ 164
            +G+++F +PNV  IW  YL +F++RYGG KLERARDLFEQ +E  P K A + Y+ YAKLEE HGL RHA +V DR+  AV+  E+ +MF +Y+ +    +GVT TRQ+YEKAI+ L EE AREMCL FA +E+KLGE+DRARAV  + SQ  DPR    +WQ
Sbjct:  196 RGIALFRWPNVYDIWNMYLTKFIDRYGGKKLERARDLFEQCLEDCPPKYAKNFYLLYAKLEEEHGLQRHAMAVYDRSTKAVQPDEQYEMFNIYIKRAAEIFGVTYTRQIYEKAIEMLPEEHAREMCLRFADLEKKLGEIDRARAVYAHCSQMCDPRTTASFWQ 358          
BLAST of mRNA_E-fasciculatus_F_contig13378.2529.1 vs. uniprot
Match: UPI0011449089 (pre-mRNA-splicing factor SYF1-like n=1 Tax=Formica exsecta TaxID=72781 RepID=UPI0011449089)

HSP 1 Score: 187 bits (474), Expect = 1.370e-54
Identity = 93/156 (59.62%), Postives = 113/156 (72.44%), Query Frame = 0
Query:    2 QGVSMFSFPNVKPIWIRYLERFVERYGGSKLERARDLFEQAVEKVPEKDAGDLYIRYAKLEETHGLMRHAASVLDRACAAVEESEKLDMFRLYVAKVESWYGVTQTRQVYEKAIKDLNEEGAREMCLAFATVEQKLGEVDRARAVLTYGSQFADPR 157
            +G+++F +PNV  IW  YL +F+ RYGG+KLER RDLFEQ +E  P K A  LY+ YAKLEE HGL RHA SV +RA  AV   EK DMF +Y+ K    YGV +TRQ+YEKAI+DLN+E  REMCL FA +E KLGEVDRARA+  Y SQ  +PR
Sbjct:  264 KGIALFKWPNVYDIWNTYLTKFLTRYGGTKLERTRDLFEQCLEHCPPKYAKALYLLYAKLEEEHGLARHAMSVYERATNAVLLEEKFDMFNIYIKKAADIYGVPKTRQIYEKAIEDLNDENTREMCLRFAEMETKLGEVDRARAIYAYCSQICNPR 419          
BLAST of mRNA_E-fasciculatus_F_contig13378.2529.1 vs. uniprot
Match: A0A1B6L619_9HEMI (Uncharacterized protein (Fragment) n=1 Tax=Graphocephala atropunctata TaxID=36148 RepID=A0A1B6L619_9HEMI)

HSP 1 Score: 184 bits (468), Expect = 1.040e-53
Identity = 91/163 (55.83%), Postives = 113/163 (69.33%), Query Frame = 0
Query:    2 QGVSMFSFPNVKPIWIRYLERFVERYGGSKLERARDLFEQAVEKVPEKDAGDLYIRYAKLEETHGLMRHAASVLDRACAAVEESEKLDMFRLYVAKVESWYGVTQTRQVYEKAIKDLNEEGAREMCLAFATVEQKLGEVDRARAVLTYGSQFADPRRAEPYWQ 164
            +G+++F +PNV  IW  YL +F+ RYGG+KLERARDLFEQ VE  P K A  LY+ YAKLEE HGL RHA +V +RA AAV   E  ++F +Y+ K    YGV QTRQ+YEKAI  L E+  REMC  FA +E KLGE+DRARA+  + SQ  DPR    +WQ
Sbjct:  264 KGIALFKWPNVYDIWNTYLTKFLNRYGGTKLERARDLFEQCVEHCPPKFAKALYLLYAKLEEDHGLARHAMAVYERATAAVLPEEMFELFNIYIKKAAEIYGVPQTRQIYEKAIDVLQEDNCREMCQRFAEMETKLGEIDRARAIYAHCSQICDPRVTAEFWQ 426          
BLAST of mRNA_E-fasciculatus_F_contig13378.2529.1 vs. uniprot
Match: UPI0006C95772 (pre-mRNA-splicing factor SYF1 n=1 Tax=Trichogramma pretiosum TaxID=7493 RepID=UPI0006C95772)

HSP 1 Score: 191 bits (485), Expect = 1.360e-53
Identity = 92/163 (56.44%), Postives = 119/163 (73.01%), Query Frame = 0
Query:    2 QGVSMFSFPNVKPIWIRYLERFVERYGGSKLERARDLFEQAVEKVPEKDAGDLYIRYAKLEETHGLMRHAASVLDRACAAVEESEKLDMFRLYVAKVESWYGVTQTRQVYEKAIKDLNEEGAREMCLAFATVEQKLGEVDRARAVLTYGSQFADPRRAEPYWQ 164
            +G+++F +PNV  IW  YL +F++RYGGSKLER+RDLFEQ +E  P K A  LY+ YAKLEE HGL RHA SV +RA  AV + E+  MF +Y+ K    YGV +TR++YEKAI+ L EE AREMC+ +A +E KLGEVDRARA+  + SQF+DPR    +WQ
Sbjct:  552 KGIALFRWPNVYDIWNTYLTKFLQRYGGSKLERSRDLFEQCLENCPPKYAKALYLLYAKLEEEHGLARHAMSVYERATGAVLDEERFGMFNIYIKKAADIYGVPKTREIYEKAIEVLKEENAREMCMRYADMETKLGEVDRARAIYIHCSQFSDPRMTNKFWQ 714          
BLAST of mRNA_E-fasciculatus_F_contig13378.2529.1 vs. uniprot
Match: A0A0J7KPA6_LASNI (Pre-mrna-splicing factor syf1-like protein n=2 Tax=Formicidae TaxID=36668 RepID=A0A0J7KPA6_LASNI)

HSP 1 Score: 189 bits (480), Expect = 1.380e-53
Identity = 95/163 (58.28%), Postives = 115/163 (70.55%), Query Frame = 0
Query:    2 QGVSMFSFPNVKPIWIRYLERFVERYGGSKLERARDLFEQAVEKVPEKDAGDLYIRYAKLEETHGLMRHAASVLDRACAAVEESEKLDMFRLYVAKVESWYGVTQTRQVYEKAIKDLNEEGAREMCLAFATVEQKLGEVDRARAVLTYGSQFADPRRAEPYWQ 164
            +G+++F +PNV  IW  YL +F+ RYGG+KLER RDLFEQ +E  P K A  LY+ YAKLEE HGL RHA SV +RA  AV   EK DMF +Y+ K    YGV +TRQ+YEKAI+ LN+E  REMCL FA +E KLGEVDRARAV  + SQ  DPR    +WQ
Sbjct:  386 KGIALFKWPNVYDIWNTYLTKFLIRYGGTKLERTRDLFEQCLEHCPPKYAKALYLLYAKLEEEHGLARHAMSVYERATNAVLPEEKFDMFNIYIKKAADIYGVPKTRQIYEKAIEVLNDENTREMCLRFAEMETKLGEVDRARAVYAHCSQICDPRVTSNFWQ 548          
BLAST of mRNA_E-fasciculatus_F_contig13378.2529.1 vs. uniprot
Match: A0A1Y2GLH5_9FUNG (Pre-mRNA splicing factor Syf-1 n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2GLH5_9FUNG)

HSP 1 Score: 191 bits (485), Expect = 1.620e-53
Identity = 87/163 (53.37%), Postives = 120/163 (73.62%), Query Frame = 0
Query:    2 QGVSMFSFPNVKPIWIRYLERFVERYGGSKLERARDLFEQAVEKVPEKDAGDLYIRYAKLEETHGLMRHAASVLDRACAAVEESEKLDMFRLYVAKVESWYGVTQTRQVYEKAIKDLNEEGAREMCLAFATVEQKLGEVDRARAVLTYGSQFADPRRAEPYWQ 164
            +G+ +F +P    +W  YL +F+ RYGG+KLERARDLFEQA++K+P K A  LY+ Y +LEETHGL RHA S+ DRA  AV   ++ DM+  Y+AK  + +GVT TR++YE+AI+ L ++ AR MC+ FA +E+KLGE+DRAR +  +GSQF+DPR A  YWQ
Sbjct:  626 RGIDLFGYPIAFELWNTYLLKFINRYGGTKLERARDLFEQALDKMPAKYAKPLYLMYGELEETHGLARHAMSIYDRATKAVASEDRADMYHFYIAKAATMFGVTSTREIYERAIETLPDKDARMMCMRFAEMERKLGEIDRARGIFAHGSQFSDPRIASDYWQ 788          
BLAST of mRNA_E-fasciculatus_F_contig13378.2529.1 vs. uniprot
Match: A0A1S3KDH1_LINUN (pre-mRNA-splicing factor SYF1 n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3KDH1_LINUN)

HSP 1 Score: 191 bits (484), Expect = 1.640e-53
Identity = 93/163 (57.06%), Postives = 116/163 (71.17%), Query Frame = 0
Query:    2 QGVSMFSFPNVKPIWIRYLERFVERYGGSKLERARDLFEQAVEKVPEKDAGDLYIRYAKLEETHGLMRHAASVLDRACAAVEESEKLDMFRLYVAKVESWYGVTQTRQVYEKAIKDLNEEGAREMCLAFATVEQKLGEVDRARAVLTYGSQFADPRRAEPYWQ 164
            +G+++F +PNV  IW  YL +F+ERYGG KLERARDLFEQ +EK P K A  +Y+ YAKLEE HGL RHA SV DRA   V   E+ +MF +Y+ +    YGVT TR +YEKAI+ LNEE AR MCL FA +E+KLGE+DRARA+  + SQ  DPR    +WQ
Sbjct:  538 KGIALFKWPNVYDIWNTYLTKFIERYGGKKLERARDLFEQCLEKCPPKFAKAIYLLYAKLEEDHGLARHAMSVYDRATKGVLPEEQYEMFNIYIKRAAELYGVTHTRPIYEKAIEVLNEEQARSMCLKFADLERKLGEIDRARAIYGHCSQMCDPRITAEFWQ 700          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13378.2529.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3C7_ECTSI3.230e-10496.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2W251_9STRA1.760e-5655.83Glycine--tRNA ligase n=1 Tax=Rhizochromulina marin... [more]
UPI001EECC3A91.290e-5556.44pre-mRNA-splicing factor syf1 homolog n=1 Tax=Homa... [more]
C3Z7Y5_BRAFL6.080e-5555.83Uncharacterized protein n=1 Tax=Branchiostoma flor... [more]
UPI00114490891.370e-5459.62pre-mRNA-splicing factor SYF1-like n=1 Tax=Formica... [more]
A0A1B6L619_9HEMI1.040e-5355.83Uncharacterized protein (Fragment) n=1 Tax=Graphoc... [more]
UPI0006C957721.360e-5356.44pre-mRNA-splicing factor SYF1 n=1 Tax=Trichogramma... [more]
A0A0J7KPA6_LASNI1.380e-5358.28Pre-mrna-splicing factor syf1-like protein n=2 Tax... [more]
A0A1Y2GLH5_9FUNG1.620e-5353.37Pre-mRNA splicing factor Syf-1 n=1 Tax=Lobosporang... [more]
A0A1S3KDH1_LINUN1.640e-5357.06pre-mRNA-splicing factor SYF1 n=1 Tax=Lingula ungu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003107HAT (Half-A-TPR) repeatSMARTSM00386hat_new_1coord: 66..100
e-value: 260.0
score: 5.0
coord: 30..64
e-value: 4.8E-5
score: 32.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 8..154
e-value: 9.1E-16
score: 60.3
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 8..95
NoneNo IPR availablePANTHERPTHR11246PRE-MRNA SPLICING FACTORcoord: 2..164
NoneNo IPR availablePANTHERPTHR11246:SF5PRE-MRNA-SPLICING FACTOR SYF1coord: 2..164

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13378contigE-fasciculatus_F_contig13378:940..3462 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13378.2529.1mRNA_E-fasciculatus_F_contig13378.2529.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig13378 937..3462 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig13378.2529.1 ID=prot_E-fasciculatus_F_contig13378.2529.1|Name=mRNA_E-fasciculatus_F_contig13378.2529.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=164bp
MQGVSMFSFPNVKPIWIRYLERFVERYGGSKLERARDLFEQAVEKVPEKD
AGDLYIRYAKLEETHGLMRHAASVLDRACAAVEESEKLDMFRLYVAKVES
WYGVTQTRQVYEKAIKDLNEEGAREMCLAFATVEQKLGEVDRARAVLTYG
SQFADPRRAEPYWQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR003107HAT