prot_E-fasciculatus_F_contig1323.2438.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1323.2438.1
Unique Nameprot_E-fasciculatus_F_contig1323.2438.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length211
Homology
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BLAST of mRNA_E-fasciculatus_F_contig1323.2438.1 vs. uniprot
Match: D7FKE7_ECTSI (RRM Nup35-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKE7_ECTSI)

HSP 1 Score: 270 bits (691), Expect = 8.640e-88
Identity = 160/204 (78.43%), Postives = 164/204 (80.39%), Query Frame = 0 
Query:    1 MFGNSGGDVGYGAQQQGYQTRSRGRGRDGPPEGQLVEGDLFGNPKHQSFRPTDPPAGVAPRGAYHDATAGGGGGVGGNAFRNNGAGAGGYGQTPAAAQPSPFARGPSPMNASFSGAGGGSAAGPGYSAGGYNDPGQTAPPPQQQQQHGFGPRVGFSSEVALVPVEASGNSRGRNVMDDXXXXDIPTRSLADVPDDVRDGGVLFG 204
            MFGNSGGDVGYG QQQGYQTRSR RGRDGPPEGQ+VEGDLFGNPK QSFR TDPP G  PRGA+HDATAGG      NAFRN G   GG GQTPAAAQPSPFARGP  MN SFS AGGG           Y++PGQTA   QQQQQHGFG RVGFSSEVALVPVEASGNSRGRNVMD XXXX IPTRSLAD PDDVRDGGVLFG
Sbjct:    1 MFGNSGGDVGYGTQQQGYQTRSRERGRDGPPEGQVVEGDLFGNPKRQSFRSTDPPTGAPPRGAFHDATAGGXXXXXXNAFRNGGXXXGGCGQTPAAAQPSPFARGP--MNDSFSAAGGGXXXXXXXXXXXYSNPGQTAQ--QQQQQHGFGARVGFSSEVALVPVEASGNSRGRNVMDXXXXXXIPTRSLADDPDDVRDGGVLFG 200
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BLAST of mRNA_E-fasciculatus_F_contig1323.2438.1 vs. uniprot
Match: A0A6H5KSX2_9PHAE (RRM Nup35-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSX2_9PHAE)

HSP 1 Score: 207 bits (526), Expect = 8.140e-63
Identity = 127/178 (71.35%), Postives = 134/178 (75.28%), Query Frame = 0 
Query:    1 MFGNSGGDVGYGAQQQGYQTRSRGRGRDGPPEGQLVEGDLFGNPKHQSFRPTDPPAGVAPRGAYHDATAGGGGGVGG-NAFRNNGAGAGGYGQTPAAAQPSPFARGPSPMNASFSGAGGGSAAGPGYSAGGYNDPGQTAPPPQQQQQHGFGPRVGFSSEVALVPVEASGNSRGRNVMD 177
            MFGNSGGDVGYG QQQGYQTRSRGRGRDGPPEGQ+VEGDLFGNPK Q+FR TDPP GV PRGAY DATAGG       NAFR+         QTPA+AQPSPFARGP  MNAS S A             GY+DPGQTA   QQQQQHGFG RVGFSS+VA VPVEASGNSRG+NVMD
Sbjct:    1 MFGNSGGDVGYGTQQQGYQTRSRGRGRDGPPEGQVVEGDLFGNPKRQNFRSTDPPTGVPPRGAYIDATAGGXXXXXXXNAFRSXXXXXXXXXQTPASAQPSPFARGP--MNASSSVAXXXXXXXXXXXXXGYSDPGQTA---QQQQQHGFGARVGFSSDVAFVPVEASGNSRGQNVMD 173
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1323.2438.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FKE7_ECTSI8.640e-8878.43RRM Nup35-type domain-containing protein n=1 Tax=E... [more]
A0A6H5KSX2_9PHAE8.140e-6371.35RRM Nup35-type domain-containing protein n=1 Tax=E... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1323contigE-fasciculatus_F_contig1323:7019..9706 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1323.2438.1mRNA_E-fasciculatus_F_contig1323.2438.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1323 6972..12731 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1323.2438.1 ID=prot_E-fasciculatus_F_contig1323.2438.1|Name=mRNA_E-fasciculatus_F_contig1323.2438.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=211bp
MFGNSGGDVGYGAQQQGYQTRSRGRGRDGPPEGQLVEGDLFGNPKHQSFR
PTDPPAGVAPRGAYHDATAGGGGGVGGNAFRNNGAGAGGYGQTPAAAQPS
PFARGPSPMNASFSGAGGGSAAGPGYSAGGYNDPGQTAPPPQQQQQHGFG
PRVGFSSEVALVPVEASGNSRGRNVMDDDDDDDIPTRSLADVPDDVRDGG
VLFGGGGAQE*
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