prot_E-fasciculatus_F_contig1323.2437.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1323.2437.1
Unique Nameprot_E-fasciculatus_F_contig1323.2437.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length72
Homology
BLAST of mRNA_E-fasciculatus_F_contig1323.2437.1 vs. uniprot
Match: D7FKE9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKE9_ECTSI)

HSP 1 Score: 147 bits (371), Expect = 1.460e-39
Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0
Query:    1 RRFVWSVPLHQDFVAAVFDVGLKCASPKLLLEMMPVVDGLTSEHIKSHLQKYRLHRQRSREEFLKSYNYLTD 72
            RRFVWSVPLHQDFVAAVFDVGLKCASPKLLLEMMPVVDGLTSEHIKSHLQKYRLHRQRSREEFLKSYNYLTD
Sbjct:  132 RRFVWSVPLHQDFVAAVFDVGLKCASPKLLLEMMPVVDGLTSEHIKSHLQKYRLHRQRSREEFLKSYNYLTD 203          
BLAST of mRNA_E-fasciculatus_F_contig1323.2437.1 vs. uniprot
Match: A0A6H5KUD1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUD1_9PHAE)

HSP 1 Score: 108 bits (271), Expect = 4.890e-26
Identity = 52/53 (98.11%), Postives = 52/53 (98.11%), Query Frame = 0
Query:    1 RRFVWSVPLHQDFVAAVFDVGLKCASPKLLLEMMPVVDGLTSEHIKSHLQKYR 53
            RRFVWSVPLHQDFVAAVFDVGLKCASPKLLLEMMPVVDGLTSEHIKSHLQK R
Sbjct:  126 RRFVWSVPLHQDFVAAVFDVGLKCASPKLLLEMMPVVDGLTSEHIKSHLQKPR 178          
BLAST of mRNA_E-fasciculatus_F_contig1323.2437.1 vs. uniprot
Match: A0A835YR85_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR85_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 1.280e-23
Identity = 44/63 (69.84%), Postives = 52/63 (82.54%), Query Frame = 0
Query:    2 RFVWSVPLHQDFVAAVFDVGLKCASPKLLLEMMPVVDGLTSEHIKSHLQKYRLHRQRSREEFL 64
            RFVW   LH  FV A+FDVGLK ASP++LL+MMP   GLT+EH+KSHLQK+RLHR +SREEFL
Sbjct:    1 RFVWPDALHAAFVTAIFDVGLKLASPRVLLDMMPDPQGLTTEHVKSHLQKFRLHRDKSREEFL 63          
BLAST of mRNA_E-fasciculatus_F_contig1323.2437.1 vs. uniprot
Match: A0A6S6I5N2_9STRA (Phosphorus starvation response 1 n=1 Tax=Nannochloropsis oceanica TaxID=145522 RepID=A0A6S6I5N2_9STRA)

HSP 1 Score: 100 bits (248), Expect = 5.180e-23
Identity = 47/67 (70.15%), Postives = 56/67 (83.58%), Query Frame = 0
Query:    1 RRFVWSVPLHQDFVAAVFDVGLKCASPKLLLEMMPVVDGLTSEHIKSHLQKYRLHRQRSREEFLKSY 67
            +RFVW   LH+DFVAA+FDVGLKCASPK +LEMM     LT +HIKSHLQKYRLHR+R+REEFL+ +
Sbjct:   77 KRFVWPDDLHRDFVAAIFDVGLKCASPKTILEMMNNTKDLTPDHIKSHLQKYRLHRERAREEFLQHF 143          
BLAST of mRNA_E-fasciculatus_F_contig1323.2437.1 vs. uniprot
Match: W7U4E9_9STRA (Two-component response regulator arr12 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U4E9_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 7.800e-23
Identity = 46/67 (68.66%), Postives = 56/67 (83.58%), Query Frame = 0
Query:    1 RRFVWSVPLHQDFVAAVFDVGLKCASPKLLLEMMPVVDGLTSEHIKSHLQKYRLHRQRSREEFLKSY 67
            +RFVW   LH+DFVAA+FDVGLKCASPK ++EMM     LT +HIKSHLQKYRLHR+R+REEFL+ +
Sbjct:   56 KRFVWPDDLHRDFVAAIFDVGLKCASPKTIMEMMSNTKELTPDHIKSHLQKYRLHRERAREEFLQHF 122          
BLAST of mRNA_E-fasciculatus_F_contig1323.2437.1 vs. uniprot
Match: A0A7S3QDX4_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QDX4_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 6.150e-21
Identity = 45/68 (66.18%), Postives = 55/68 (80.88%), Query Frame = 0
Query:    1 RRFVWSVPLHQDFVAAVFDVGLKCASPKLLLEMMPVVDGLTSEHIKSHLQKYRLHRQRSREEFLKSYN 68
            RRF W   LH+DFV+AVFDVGLK +SP  LLE MP  + +TSE IKSHLQKYRLHRQ+S++EF+ SY+
Sbjct:  158 RRFAWPDELHRDFVSAVFDVGLKHSSPSALLEQMPKHEDITSERIKSHLQKYRLHRQKSKKEFMSSYD 225          
BLAST of mRNA_E-fasciculatus_F_contig1323.2437.1 vs. uniprot
Match: A0A7S3LD31_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LD31_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 8.800e-20
Identity = 40/68 (58.82%), Postives = 54/68 (79.41%), Query Frame = 0
Query:    1 RRFVWSVPLHQDFVAAVFDVGLKCASPKLLLEMMPVVDGLTSEHIKSHLQKYRLHRQRSREEFLKSYN 68
            +RF W   LH+DFVAA+FDVGLK +SP  +LE MP  + +TSE +KSHLQKYR+HR +S++EF+ SY+
Sbjct:   84 KRFTWPDDLHRDFVAAIFDVGLKHSSPSTILEHMPKHEQITSERVKSHLQKYRIHRIKSKKEFMSSYD 151          
BLAST of mRNA_E-fasciculatus_F_contig1323.2437.1 vs. uniprot
Match: A0A4D9DAJ4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DAJ4_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 1.520e-18
Identity = 41/62 (66.13%), Postives = 54/62 (87.10%), Query Frame = 0
Query:    8 PLHQ-DFVAAVFDVGLKCASPKLLLEMMPVVDGLTSEHIKSHLQKYRLHRQRSREEFLKSYN 68
            P H+ DFV AVF +GL+C+SPK+L+++MP+ D LT+EHIKSHLQKYRLH QRS+EEF++ YN
Sbjct:  287 PQHETDFVGAVFKLGLQCSSPKVLMDLMPMTDTLTTEHIKSHLQKYRLHGQRSKEEFVEYYN 348          
BLAST of mRNA_E-fasciculatus_F_contig1323.2437.1 vs. uniprot
Match: A0A7S2YNK9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YNK9_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 1.680e-18
Identity = 40/67 (59.70%), Postives = 53/67 (79.10%), Query Frame = 0
Query:    1 RRFVWSVPLHQDFVAAVFDVGLKCASPKLLLEMMPVVDGLTSEHIKSHLQKYRLHRQRSREEFLKSY 67
            +RF W   LH+DFV+A+FDVGLK +SP  LLE MP  + +T+E IKSHLQKYRLHR +S++EF+ +Y
Sbjct:  193 KRFTWPEELHRDFVSAIFDVGLKHSSPSTLLEQMPKHEQITTERIKSHLQKYRLHRVKSKQEFMHTY 259          
BLAST of mRNA_E-fasciculatus_F_contig1323.2437.1 vs. uniprot
Match: W7TSM2_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TSM2_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 1.810e-18
Identity = 41/62 (66.13%), Postives = 54/62 (87.10%), Query Frame = 0
Query:    8 PLHQ-DFVAAVFDVGLKCASPKLLLEMMPVVDGLTSEHIKSHLQKYRLHRQRSREEFLKSYN 68
            P H+ DFV AVF +GL+C+SPK+L+++MP+ D LT+EHIKSHLQKYRLH QRS+EEF++ YN
Sbjct:  316 PQHETDFVGAVFKLGLQCSSPKVLMDLMPMTDTLTTEHIKSHLQKYRLHGQRSKEEFVEYYN 377          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1323.2437.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKE9_ECTSI1.460e-39100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KUD1_9PHAE4.890e-2698.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YR85_9STRA1.280e-2369.84Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A6S6I5N2_9STRA5.180e-2370.15Phosphorus starvation response 1 n=1 Tax=Nannochlo... [more]
W7U4E9_9STRA7.800e-2368.66Two-component response regulator arr12 n=2 Tax=Mon... [more]
A0A7S3QDX4_9STRA6.150e-2166.18Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S3LD31_9STRA8.800e-2058.82Hypothetical protein (Fragment) n=1 Tax=Amphora co... [more]
A0A4D9DAJ4_9STRA1.520e-1866.13Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S2YNK9_9STRA1.680e-1859.70Hypothetical protein (Fragment) n=1 Tax=Amphiprora... [more]
W7TSM2_9STRA1.810e-1866.13Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006447Myb domain, plantsTIGRFAMTIGR01557TIGR01557coord: 2..55
e-value: 1.3E-16
score: 58.6
NoneNo IPR availableGENE3D1.10.10.60coord: 1..59
e-value: 1.8E-21
score: 77.9
NoneNo IPR availablePANTHERPTHR31442:SF21TRANSCRIPTION FACTOR BOA-RELATEDcoord: 2..63
NoneNo IPR availablePANTHERPTHR31442FAMILY NOT NAMEDcoord: 2..63
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 1..57
score: 9.589
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 2..58

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1323contigE-fasciculatus_F_contig1323:698..913 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1323.2437.1mRNA_E-fasciculatus_F_contig1323.2437.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1323 698..913 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1323.2437.1 ID=prot_E-fasciculatus_F_contig1323.2437.1|Name=mRNA_E-fasciculatus_F_contig1323.2437.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=72bp
RRFVWSVPLHQDFVAAVFDVGLKCASPKLLLEMMPVVDGLTSEHIKSHLQ
KYRLHRQRSREEFLKSYNYLTD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009057Homeobox-like_sf
IPR017930Myb_dom
IPR006447Myb_dom_plants