prot_E-fasciculatus_F_contig13209.2419.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig13209.2419.1
Unique Nameprot_E-fasciculatus_F_contig13209.2419.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length111
Homology
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BLAST of mRNA_E-fasciculatus_F_contig13209.2419.1 vs. uniprot
Match: D7FMM7_ECTSI (Ubiquinone biosynthesis protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMM7_ECTSI)

HSP 1 Score: 150 bits (380), Expect = 6.090e-42
Identity = 94/111 (84.68%), Postives = 98/111 (88.29%), Query Frame = 0 
Query:    1 VIVSKITPVELFMLTDKSEDLKDTWDFLDRLLLNYEILASSPENAADVATGVSTXXXXXXXXXXXXXGPILKQASKQVPGAETLTQTAPNVAALASQALSFVASQVPHAGE 111
            VI       EL+MLTDKSEDLKDTWD LDRLLL+YEILASSPENAADVATG+STXXXXXXXXXXXX GP  KQASKQVPGAETL QTAPNVAALASQALSFVASQVP AG+
Sbjct:  196 VIAGMYASTELYMLTDKSEDLKDTWDLLDRLLLDYEILASSPENAADVATGLSTXXXXXXXXXXXXAGPFFKQASKQVPGAETLAQTAPNVAALASQALSFVASQVPRAGQ 306
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BLAST of mRNA_E-fasciculatus_F_contig13209.2419.1 vs. uniprot
Match: A0A6H5JV38_9PHAE (Ubiquinone biosynthesis protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV38_9PHAE)

HSP 1 Score: 145 bits (367), Expect = 3.550e-39
Identity = 86/111 (77.48%), Postives = 93/111 (83.78%), Query Frame = 0 
Query:    1 VIVSKITPVELFMLTDKSEDLKDTWDFLDRLLLNYEILASSPENAADVATGVSTXXXXXXXXXXXXXGPILKQASKQVPGAETLTQTAPNVAALASQALSFVASQVPHAGE 111
            +I       EL+MLTDKSE LKDTWDFLDRLLL+YEILA++PENAADVATG+ T  XXXXXXXX   GP LKQASKQVPGAE L QTAPNVAALASQALSFVASQVP AG+
Sbjct:  316 IIAGMYASTELYMLTDKSEGLKDTWDFLDRLLLDYEILAAAPENAADVATGLGTVAXXXXXXXXSLAGPFLKQASKQVPGAEALAQTAPNVAALASQALSFVASQVPRAGQ 426
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13209.2419.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FMM7_ECTSI6.090e-4284.68Ubiquinone biosynthesis protein n=1 Tax=Ectocarpus... [more]
A0A6H5JV38_9PHAE3.550e-3977.48Ubiquinone biosynthesis protein n=1 Tax=Ectocarpus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013718COQ9PFAMPF08511COQ9coord: 9..34
e-value: 4.1E-6
score: 26.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13209contigE-fasciculatus_F_contig13209:40..3207 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13209.2419.1mRNA_E-fasciculatus_F_contig13209.2419.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig13209 40..3207 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig13209.2419.1 ID=prot_E-fasciculatus_F_contig13209.2419.1|Name=mRNA_E-fasciculatus_F_contig13209.2419.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=111bp
VIVSKITPVELFMLTDKSEDLKDTWDFLDRLLLNYEILASSPENAADVAT
GVSTVATSLSSAALSLAGPILKQASKQVPGAETLTQTAPNVAALASQALS
FVASQVPHAGE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013718COQ9