prot_E-fasciculatus_F_contig1316.2385.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1316.2385.1
Unique Nameprot_E-fasciculatus_F_contig1316.2385.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length318
Homology
BLAST of mRNA_E-fasciculatus_F_contig1316.2385.1 vs. uniprot
Match: A0A6H5JQL0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQL0_9PHAE)

HSP 1 Score: 493 bits (1269), Expect = 6.020e-174
Identity = 268/316 (84.81%), Postives = 282/316 (89.24%), Query Frame = 0
Query:    1 MEPSRPYHDAHRPRRETAARLRSGSAGGLARVGTTTVLVLLHLSCCGALLLMNQRPPLLLSLCQGAESPPRAASGVRSASFE-DKNLPEDPRRHDNRRPMSRRNLLENSKGIALGIGLAGPMRGTALHGASAGRAVGAVAAGSWGLGLGQGGVRSAEAFGGPSRPLSRCLVNAVNAREFCRRLEADLAAGRNEQECRGMVKGVLRGLTLQESIKDAVLYLPRGKRQAAGDAGQSAVEYLASVVEFDAWDKLDKDWTSNVALRNMTPENVMFVRMALDASGSALDTFLRQFESADVDSARELYRLYFLPAEEREQPT 315
            MEPSR +HDAHRP+RETA RLR    GGLARVGTTT L+LL+LS C   LLMN R    +SLCQ  ESPPRAASGVR+AS E D++LP DP RHD+R PMSRRNLLEN+KG ALGIGLAGPMRGTAL  ASA R VGAVAAGSWGLGLG+ GVR AEAFGGPSRPLSRCLVNAVNAREFC RLEADLAAGRNEQECRGMVKGVLRGL+LQESIKDAVLYLPRGKRQ AGDAGQSAVEYLASVVEFDAWDKLDKDWTSNVALRNMTPENV+FVRMALDAS SALDTFL QF+SADVDSARELYRLYFLPAEEREQPT
Sbjct:    1 MEPSRLFHDAHRPQRETAVRLRPSCDGGLARVGTTTFLLLLYLSFCCEALLMNLRSQ--MSLCQVVESPPRAASGVRTASSEHDEDLPGDPSRHDSRLPMSRRNLLENAKGTALGIGLAGPMRGTALRRASAVRTVGAVAAGSWGLGLGREGVRPAEAFGGPSRPLSRCLVNAVNAREFCGRLEADLAAGRNEQECRGMVKGVLRGLSLQESIKDAVLYLPRGKRQVAGDAGQSAVEYLASVVEFDAWDKLDKDWTSNVALRNMTPENVLFVRMALDASASALDTFLGQFDSADVDSARELYRLYFLPAEEREQPT 314          
BLAST of mRNA_E-fasciculatus_F_contig1316.2385.1 vs. uniprot
Match: D7FU88_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU88_ECTSI)

HSP 1 Score: 432 bits (1110), Expect = 8.920e-151
Identity = 229/252 (90.87%), Postives = 237/252 (94.05%), Query Frame = 0
Query:   52 MNQRPPLLLSLCQGAESPPRAASGVRSASFEDKNLPEDPRRHDNRRPMSRRNLLENSKGIALGIGLAGPMRGTALHGASAGRAVGAVAAGSWGLGLGQGGVRSAEAFGGPSRPLSRCLVNAVNAREFCRRLEADLAAGRNEQECRGMVKGVLRGLTLQESIKDAVLYLPRGKRQAAGDAGQSAVEYLASVVEFDAWDKLDKDWTSNVALRNMTPENVMFVRMALDASGSALDTFLRQFESADVDSARELYRL 303
            MNQR   LLSLCQG  SPPR ASGVR+AS ED++LP  PRRHD+RRPMSRRNLLEN+KG ALGIGLAGPMR TAL  ASAGRAVGAVAAGSWGLGLG+GG  SAEAFGGPSRPLSRCLVNAVNAREFCRRLEADLAAGRNEQECRGMVKGVLRGLTLQESIKDAVLYLPRGKRQAAGDAGQSAVEYLASVVEFDAWDKLDKDWTSNVALRNMTPENV+FVRMALDASGSALDTFLRQF+SADVDSARELYRL
Sbjct:    1 MNQRS--LLSLCQGVGSPPRVASGVRTASSEDEDLPGGPRRHDSRRPMSRRNLLENAKGTALGIGLAGPMRATALRRASAGRAVGAVAAGSWGLGLGRGGGSSAEAFGGPSRPLSRCLVNAVNAREFCRRLEADLAAGRNEQECRGMVKGVLRGLTLQESIKDAVLYLPRGKRQAAGDAGQSAVEYLASVVEFDAWDKLDKDWTSNVALRNMTPENVLFVRMALDASGSALDTFLRQFDSADVDSARELYRL 250          
BLAST of mRNA_E-fasciculatus_F_contig1316.2385.1 vs. uniprot
Match: L1IFU1_GUITC (Uncharacterized protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1IFU1_GUITC)

HSP 1 Score: 55.5 bits (132), Expect = 3.650e-5
Identity = 45/155 (29.03%), Postives = 67/155 (43.23%), Query Frame = 0
Query:  169 LVNAVNAREFCRRLEADLAAGRNEQECRGMVKGVLRGLTLQESIKDAVLY----------------LPRGKRQAAGDAGQSAVEYLASVVEFDAWDKLDKDWTSNVALRNMTPENVMFVRMALDASGSALDTFLRQFESADVDSARELYRLYFLP 307
            LVN +  +E  R L      G+     +  VK + R      +++ AV                  L     QA   AG+  VE+L+ +VE+D WDKLDK+   N   + MT + + F    L+A    +D FL  F +  V  A+E+Y   F P
Sbjct:  127 LVNTIRLKEGVRYLLLYSLTGKEVDSFQQEVKFLFRDTNPSRNLEAAVAAQQACSALIDDSEEPPRLTPNAVQAQLSAGK-IVEFLSKLVEYDGWDKLDKE-DINPKFQRMTEQKIKFATRGLNAIIEEIDHFLALFPADQVREAQEVYNEVFAP 279          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1316.2385.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JQL0_9PHAE6.020e-17484.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FU88_ECTSI8.920e-15190.87Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
L1IFU1_GUITC3.650e-529.03Uncharacterized protein n=2 Tax=Guillardia theta T... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 29..52
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 53..317
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..28

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1316contigE-fasciculatus_F_contig1316:11056..15358 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1316.2385.1mRNA_E-fasciculatus_F_contig1316.2385.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1316 10114..15456 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1316.2385.1 ID=prot_E-fasciculatus_F_contig1316.2385.1|Name=mRNA_E-fasciculatus_F_contig1316.2385.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=318bp
MEPSRPYHDAHRPRRETAARLRSGSAGGLARVGTTTVLVLLHLSCCGALL
LMNQRPPLLLSLCQGAESPPRAASGVRSASFEDKNLPEDPRRHDNRRPMS
RRNLLENSKGIALGIGLAGPMRGTALHGASAGRAVGAVAAGSWGLGLGQG
GVRSAEAFGGPSRPLSRCLVNAVNAREFCRRLEADLAAGRNEQECRGMVK
GVLRGLTLQESIKDAVLYLPRGKRQAAGDAGQSAVEYLASVVEFDAWDKL
DKDWTSNVALRNMTPENVMFVRMALDASGSALDTFLRQFESADVDSAREL
YRLYFLPAEEREQPTGI*
back to top