prot_E-fasciculatus_F_contig13067.2323.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig13067.2323.1
Unique Nameprot_E-fasciculatus_F_contig13067.2323.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length424
Homology
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BLAST of mRNA_E-fasciculatus_F_contig13067.2323.1 vs. uniprot
Match: D8LT10_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT10_ECTSI)

HSP 1 Score: 437 bits (1125), Expect = 1.090e-145
Identity = 312/439 (71.07%), Postives = 318/439 (72.44%), Query Frame = 0 
Query:    1 MEQDEIAIQIDAAKRLLALYDSNSDTPDVAILPSPPPAPAQAPRAESTSXXXXXXXXXGSF---------------SGAVRGXXXXXXXXXXXRVSGSAPSLSAPAARSKGKTSARRATGSGRKGDSSXXXXXXXXXXXXXXYPPGSRRDGLPGGVGGEGRGXXXXGFGLITSMPPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPASVDAADEFPARVPSDGAXXXXXXXXXXXXXXXXXRTSXXXXXXSSGG-SRETTGVHRGVEVNRDSFNIVKQLMFKTSRSRKPRAMAFNPVDRGLFAVCSADLSVDLWRYGRSNQELEKVSERNDVTPVGGAHMAWNPSGTHLAIGHSGSTIVDNWAATIIAKDGRRKSDMKLRSDRHNKAAQAVAWVTPSKNNQDHLVTGGEDGHVVIWTRVLDAESDLHKVA 423
            MEQDEIAIQ DAAKRLLALYDSNSDTPDVAILPS               XXXXXXXXX                  S A RG           RVSGS+PSLSAPAARS GK                              YP GS R GLPGGVGGE       GFGLITSMPPA    XXXXXXXXXXXXXXXXXXXXXXXXXXX     PPASVDAADEFPARVPSDGA            XXXXX   XXXXXX     SRETTGVHRGVEVNRDSFNIVKQLMF+TSRSRKPR MAFNPVD GLFAVCSADLSVDLWRYGR+ QELEKVSERNDVTPVGGAHMAWNPSGTHLAIGHSGST+V+NWAATIIAKDGRRKSDMKLRSDRH+K AQAVAWVTPSKNNQDHLVTGGEDGHVVIWTRVLDAESDLHKVA
Sbjct:  223 MEQDEIAIQFDAAKRLLALYDSNSDTPDVAILPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAAARGS----------RVSGSSPSLSAPAARSNGKD-----------------------------YPLGSTRVGLPGGVGGE-------GFGLITSMPPAGGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXRK---PPASVDAADEFPARVPSDGAGAGAGEGALDSGXXXXXXXXXXXXXXXXXXXSRETTGVHRGVEVNRDSFNIVKQLMFQTSRSRKPRTMAFNPVDPGLFAVCSADLSVDLWRYGRNKQELEKVSERNDVTPVGGAHMAWNPSGTHLAIGHSGSTLVNNWAATIIAKDGRRKSDMKLRSDRHHKPAQAVAWVTPSKNNQDHLVTGGEDGHVVIWTRVLDAESDLHKVA 612
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BLAST of mRNA_E-fasciculatus_F_contig13067.2323.1 vs. uniprot
Match: A0A6H5KKY4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKY4_9PHAE)

HSP 1 Score: 395 bits (1016), Expect = 1.400e-125
Identity = 325/430 (75.58%), Postives = 330/430 (76.74%), Query Frame = 0 
Query:    1 MEQDEIAIQIDAAKRLLALYDSNSDTPDVAILPSPPPAPAQAPRAESTSXXXXXXXXXGSFSGAVRGXXXXXXXXXXXRVSGSAPSLSAPAARSKGKTSARRATGSGRKGDSSXXXXXXXXXXXXXX-----YPPGSRRDGLPGGVGGEGRGXXXXGFGLITSMPPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPASVDAADEFPARVPSDGAXXXXXXXXXXXXXXXXXRTSXXXXXXSSGG-SRETTGVHRGVEVNRDSFNIVKQLMFKTSRSRKPRAMAFNPVDRGLFAVCSADLSVDLWRYGRSNQELEKVSERNDVTPVGGAHMAWNPSGTHLAIGHSGSTIVDNWAATIIAKDGRRKSDMKLRSDRHNKAAQAVAWVTPSKNNQDHLVTGGEDGHVVIWTRVLDAESDLHKVAV 424
            MEQDEIAIQIDAAKRLLALYDSNSDTPDV ILPS               XXXXXXXXX         XXXXXXXXXXX                                   XXXXXXXXXXXXXX     YP GS R GLPGGVGGE       GFGLITSMPPA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    PPASVDAADEFPARVPSDGA  XXXXX    XXXXXX   XXXXXX     SRETTGVHRGVEV RDSFNIVKQLMF+TSRSRKPR MAFNPVD GLFAVCSADLSVDLWRYGR+ QELEKVSERNDVTPVGGAHMAWNPSGTHLAIGHSGST+V+NWAATIIAKDGR KSDMKLRSDRHNK AQAVAWVTPSKNNQDHLVTGGEDGHVVIWTRVLDAESDLHKVA+
Sbjct:  351 MEQDEIAIQIDAAKRLLALYDSNSDTPDVTILPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDYPLGSTRVGLPGGVGGE-------GFGLITSMPPAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRK-PPASVDAADEFPARVPSDGAGAXXXXXALDSXXXXXXXXXXXXXXXXXXXXSRETTGVHRGVEVKRDSFNIVKQLMFQTSRSRKPRTMAFNPVDPGLFAVCSADLSVDLWRYGRNKQELEKVSERNDVTPVGGAHMAWNPSGTHLAIGHSGSTLVNNWAATIIAKDGRSKSDMKLRSDRHNKPAQAVAWVTPSKNNQDHLVTGGEDGHVVIWTRVLDAESDLHKVAI 772
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig13067.2323.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LT10_ECTSI1.090e-14571.07Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KKY4_9PHAE1.400e-12575.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 256..422
e-value: 2.5E-13
score: 52.1
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 279..410

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig13067contigE-fasciculatus_F_contig13067:396..3506 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig13067.2323.1mRNA_E-fasciculatus_F_contig13067.2323.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig13067 396..3506 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig13067.2323.1 ID=prot_E-fasciculatus_F_contig13067.2323.1|Name=mRNA_E-fasciculatus_F_contig13067.2323.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=424bp
MEQDEIAIQIDAAKRLLALYDSNSDTPDVAILPSPPPAPAQAPRAESTSP
AAAAASRSGSFSGAVRGRGGGSTGARGGRVSGSAPSLSAPAARSKGKTSA
RRATGSGRKGDSSSSSSSSSSDNDDEEYPPGSRRDGLPGGVGGEGRGVGG
EGFGLITSMPPAGGGSGSGGGGSSSRNGASRNAVAAAGAAGSAAASRKPP
ASVDAADEFPARVPSDGAGAGAGEGASDSGGTGTGRTSGGGGGGSSGGSR
ETTGVHRGVEVNRDSFNIVKQLMFKTSRSRKPRAMAFNPVDRGLFAVCSA
DLSVDLWRYGRSNQELEKVSERNDVTPVGGAHMAWNPSGTHLAIGHSGST
IVDNWAATIIAKDGRRKSDMKLRSDRHNKAAQAVAWVTPSKNNQDHLVTG
GEDGHVVIWTRVLDAESDLHKVAV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036322WD40_repeat_dom_sf
IPR015943WD40/YVTN_repeat-like_dom_sf