prot_E-fasciculatus_F_contig12986.2261.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12986.2261.1
Unique Nameprot_E-fasciculatus_F_contig12986.2261.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length119
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig12986.2261.1 vs. uniprot
Match: D7FQ17_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ17_ECTSI)

HSP 1 Score: 213 bits (543), Expect = 7.510e-62
Identity = 109/119 (91.60%), Postives = 111/119 (93.28%), Query Frame = 0 
Query:    1 MLGDLFSPGDFGAPDGGGFKDEGGGKPGITLPEFRPTGDAFTGDIQMPVLPLKSALQRTRAAQQRAAGPGGVGDEGAGLLHNEAYYGDEDEGVGTAFAQSEEKALVRPKYVRKQQGDYA 119
            MLGDLFSPGDFGA DGGGFKDEGGGK GI LPEFRPTGDAFTGDIQMPVLPLKSALQRTRAAQQR AGPGG G+EGAGLL+NEAY GD DEGVG AFAQSEEKALVRPKYVRKQQGDYA
Sbjct: 2260 MLGDLFSPGDFGASDGGGFKDEGGGKQGIILPEFRPTGDAFTGDIQMPVLPLKSALQRTRAAQQRGAGPGGGGNEGAGLLNNEAYDGDGDEGVGAAFAQSEEKALVRPKYVRKQQGDYA 2378
[Close]
BLAST of mRNA_E-fasciculatus_F_contig12986.2261.1 vs. uniprot
Match: A0A6H5KQM6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQM6_9PHAE)

HSP 1 Score: 73.6 bits (179), Expect = 8.400e-13
Identity = 37/45 (82.22%), Postives = 38/45 (84.44%), Query Frame = 0 
Query:   75 EGAGLLHNEAYYGDEDEGVGTAFAQSEEKALVRPKYVRKQQGDYA 119
            +GA LLHNE Y GD DEGVG  FAQSEEKALVRPKYVRKQQGD A
Sbjct:  555 QGASLLHNEEYDGDGDEGVGATFAQSEEKALVRPKYVRKQQGDDA 599
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12986.2261.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FQ17_ECTSI7.510e-6291.60Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KQM6_9PHAE8.400e-1382.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12986contigE-fasciculatus_F_contig12986:1148..2690 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12986.2261.1mRNA_E-fasciculatus_F_contig12986.2261.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12986 1148..2690 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12986.2261.1 ID=prot_E-fasciculatus_F_contig12986.2261.1|Name=mRNA_E-fasciculatus_F_contig12986.2261.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=119bp
MLGDLFSPGDFGAPDGGGFKDEGGGKPGITLPEFRPTGDAFTGDIQMPVL
PLKSALQRTRAAQQRAAGPGGVGDEGAGLLHNEAYYGDEDEGVGTAFAQS
EEKALVRPKYVRKQQGDYA
back to top