prot_E-fasciculatus_F_contig12986.2260.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12986.2260.1
Unique Nameprot_E-fasciculatus_F_contig12986.2260.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length112
Homology
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BLAST of mRNA_E-fasciculatus_F_contig12986.2260.1 vs. uniprot
Match: D7FQ17_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ17_ECTSI)

HSP 1 Score: 186 bits (473), Expect = 1.510e-52
Identity = 96/112 (85.71%), Postives = 99/112 (88.39%), Query Frame = 0 
Query:    1 VALSRFLDGKGALGLLCRKCRRRKKIGAFEGGVDGEGEIGDGGVGYNTLPGSDGNGGXXXXXXXXEELGEERVDSLSFRRAFLEGYLLPHEYGACYGFAACVALTVVMGLLL 112
            VALSRFLDGKG+LG+LCRKCRRRKKIGAFEGGVDGEGEIG+  VGY TLPGSDGNGG        EELGE RVDSLSFRRAFLEGYLLPHEY ACYGFAACVALTVVMGLLL
Sbjct: 2405 VALSRFLDGKGSLGVLCRKCRRRKKIGAFEGGVDGEGEIGEXDVGYGTLPGSDGNGGGNHGDNADEELGEVRVDSLSFRRAFLEGYLLPHEYRACYGFAACVALTVVMGLLL 2516
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BLAST of mRNA_E-fasciculatus_F_contig12986.2260.1 vs. uniprot
Match: A0A6H5KQM6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQM6_9PHAE)

HSP 1 Score: 166 bits (421), Expect = 1.460e-45
Identity = 88/112 (78.57%), Postives = 92/112 (82.14%), Query Frame = 0 
Query:    1 VALSRFLDGKGALGLLCRKCRRRKKIGAFEGGVDGEGEIGDGGVGYNTLPGSDGNGGXXXXXXXXEELGEERVDSLSFRRAFLEGYLLPHEYGACYGFAACVALTVVMGLLL 112
            VALS+FLDGKG+LG+LCRKCRR+KKIGAFE GVDGEGEI        TLPGSD NGG        EELGE RVDSLSFRRAFLEGYLLPHEY ACYGFAACVALTVVMGLLL
Sbjct:  626 VALSQFLDGKGSLGVLCRKCRRKKKIGAFEDGVDGEGEIXXXXXXXGTLPGSDRNGGGNQGDNADEELGEVRVDSLSFRRAFLEGYLLPHEYRACYGFAACVALTVVMGLLL 737
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12986.2260.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FQ17_ECTSI1.510e-5285.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KQM6_9PHAE1.460e-4578.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..91
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 92..111
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 112..112

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12986contigE-fasciculatus_F_contig12986:162..1069 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12986.2260.1mRNA_E-fasciculatus_F_contig12986.2260.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12986 161..1069 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12986.2260.1 ID=prot_E-fasciculatus_F_contig12986.2260.1|Name=mRNA_E-fasciculatus_F_contig12986.2260.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=112bp
VALSRFLDGKGALGLLCRKCRRRKKIGAFEGGVDGEGEIGDGGVGYNTLP
GSDGNGGGNGGDNADEELGEERVDSLSFRRAFLEGYLLPHEYGACYGFAA
CVALTVVMGLLL
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