prot_E-fasciculatus_F_contig12966.2247.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12966.2247.1
Unique Nameprot_E-fasciculatus_F_contig12966.2247.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length147
Homology
BLAST of mRNA_E-fasciculatus_F_contig12966.2247.1 vs. uniprot
Match: D7FYB5_ECTSI (Dihydrodipicolinate synthetase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYB5_ECTSI)

HSP 1 Score: 255 bits (651), Expect = 1.570e-84
Identity = 130/147 (88.44%), Postives = 139/147 (94.56%), Query Frame = 0
Query:    1 TGRLALRGPVFDLLTPFTGEGEVDFTAFGDYLQFLSKAGVPTILCNGEAGEFASLTTDERKLLVEFARDSFSGTVLNHVSASALPDVTRLISHSSGKADGGSRTVADAVLVMPPCSSFGGSAGGRVAERGGEEERGTEAFLRKALGG 147
            TGRLALRGPVFD+LTPFTGEGEVDFTAFGDYLQFLS+AGVPTILCNGEAGEFASLTT ERKL+V+FAR +FSGTVLNHVSASALPDVT+LISHSSGK+ GGSRT+ADAVLVMPPCSSFGG  GGR  ERGG+E RGTEAFLRKALGG
Sbjct:   14 TGRLALRGPVFDVLTPFTGEGEVDFTAFGDYLQFLSEAGVPTILCNGEAGEFASLTTGERKLIVDFARKTFSGTVLNHVSASALPDVTQLISHSSGKSGGGSRTLADAVLVMPPCSSFGGYPGGRETERGGDE-RGTEAFLRKALGG 159          
BLAST of mRNA_E-fasciculatus_F_contig12966.2247.1 vs. uniprot
Match: A0A835YPJ8_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPJ8_9STRA)

HSP 1 Score: 114 bits (286), Expect = 1.170e-29
Identity = 66/137 (48.18%), Postives = 86/137 (62.77%), Query Frame = 0
Query:   13 LLTPFTGEGEVDFTAFGDYLQFLSKAGVPTILCNGEAGEFASLTTDERKLLVEFARDSFSGTVLNHVSASALPDVTRLISHSSGKAD----GGSRTVADAVLVMPPCSSFGGSAGGRVAERGGEEERGTEAFLRKAL 145
            LLTPFT  GE+DF +   +LQFL  AG+ +I+C   AGE+ SLT +ER+ L+ F R  FSG ++NHVSASAL DV +LI++S G A     GG  T ADA+L+ PP  +F G+            E G EAFL +AL
Sbjct:    1 LLTPFTDFGEIDFGSLESHLQFLEAAGISSIICGDNAGEYPSLTLEERQRLLNFCRQRFSGQIINHVSASALYDVLQLIAYSGGLAGAGGLGGHSTRADAILLQPP-QAFAGA-----------NEEGIEAFLHEAL 125          
BLAST of mRNA_E-fasciculatus_F_contig12966.2247.1 vs. uniprot
Match: UPI0019D8F219 (Dihydrodipicolinate synthase family protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=UPI0019D8F219)

HSP 1 Score: 100 bits (250), Expect = 6.250e-23
Identity = 48/109 (44.04%), Postives = 69/109 (63.30%), Query Frame = 0
Query:    6 LRGPVFDLLTPFTGEGEVDFTAFGDYLQFLSKAGVPTILCNGEAGEFASLTTDERKLLVEFARDSFSGTVLNHVSASALPDVTRLISHSSGKADGGSRTVADAVLVMPP 114
            + GP+F ++TPF   G++DF + G+YL FL + GV  I+ NG  GEFASLT +ER+ ++E+ R  F G V+ H+SA A+ D   L+ H+S          ADA LV+PP
Sbjct:    4 IEGPIFAIVTPFDRSGKIDFGSLGEYLAFLKECGVQNIIVNGTMGEFASLTFEERRSVLEYCRSQFPGCVMAHISACAVKDCVMLLEHAS--------EYADAALVLPP 104          
BLAST of mRNA_E-fasciculatus_F_contig12966.2247.1 vs. uniprot
Match: UPI001F49025D (dihydrodipicolinate synthase family protein n=1 Tax=Methylomarinum vadi TaxID=438855 RepID=UPI001F49025D)

HSP 1 Score: 95.9 bits (237), Expect = 1.190e-20
Identity = 47/111 (42.34%), Postives = 70/111 (63.06%), Query Frame = 0
Query:    4 LALRGPVFDLLTPFTGEGEVDFTAFGDYLQFLSKAGVPTILCNGEAGEFASLTTDERKLLVEFARDSFSGTVLNHVSASALPDVTRLISHSSGKADGGSRTVADAVLVMPP 114
            + ++GP+  LLTPF   G++D+ AF  YL  L   GV T++ NG   EFASLT DER+ ++EF R  F+GT++N+VSA+ + DV  LI  +  +        AD +L++PP
Sbjct:   74 IQVQGPIVTLLTPFDRNGDIDWQAFKRYLASLYSWGVGTVIANGTTAEFASLTIDERRQVIEFVRKHFAGTIINNVSATCVKDVRELIDETQDR--------ADLLLILPP 176          
BLAST of mRNA_E-fasciculatus_F_contig12966.2247.1 vs. uniprot
Match: UPI001894CAD9 (dihydrodipicolinate synthase family protein n=1 Tax=Nocardia abscessus TaxID=120957 RepID=UPI001894CAD9)

HSP 1 Score: 88.6 bits (218), Expect = 2.790e-18
Identity = 57/142 (40.14%), Postives = 74/142 (52.11%), Query Frame = 0
Query:    6 LRGPVFDLLTPFTGEGEVDFTAFGDYLQFLSKAGVPTILCNGEAGEFASLTTDERKLLVEFARDSFSGTVLNHVSASALPDVTRLISHSSGKADGGSRTVADAVLVMPPCSSFGGSAGGRVAERGGEEERGTEAFLRKALGG 147
            L   V  +L PF   G +D  A  DYLQ L+ AGV TIL NG +GEFA LT DER+ ++E  R  ++GTV+ HV A+A+ DV     H+           ADAV V+ P   F  +A           E G E F R+A+ G
Sbjct:    2 LDSAVVAVLAPFQRSGRIDLAALTDYLQLLASAGVGTILVNGTSGEFAGLTADERRSVIEHCRGEWAGTVIAHVGATAVADVRAAARHAQEH--------ADAVAVIAPY--FFAAA----------PESGVEQFFRQAMTG 123          
BLAST of mRNA_E-fasciculatus_F_contig12966.2247.1 vs. uniprot
Match: K0F0F0_9NOCA (Dihydrodipicolinate synthase n=2 Tax=Nocardia brasiliensis TaxID=37326 RepID=K0F0F0_9NOCA)

HSP 1 Score: 81.6 bits (200), Expect = 9.950e-16
Identity = 38/94 (40.43%), Postives = 58/94 (61.70%), Query Frame = 0
Query:    6 LRGPVFDLLTPFTGEGEVDFTAFGDYLQFLSKAGVPTILCNGEAGEFASLTTDERKLLVEFARDSFSGTVLNHVSASALPDVTRLISHSSGKAD 99
            +  P+  + TPF  +G +D  A GDYL  L+ AG+ TIL NG   EFASLT+ ER+ +VE+AR  ++G ++ HV + A+ +   L  H++   D
Sbjct:    2 ITSPIVAVTTPFQLDGRIDLPALGDYLDLLAAAGIRTILVNGTTAEFASLTSAERRRIVEYARGRWAGELIAHVGSPAIAEAEELADHAAQHCD 95          
BLAST of mRNA_E-fasciculatus_F_contig12966.2247.1 vs. uniprot
Match: A0A450SP52_9GAMM (4-hydroxy-tetrahydrodipicolinate synthase n=2 Tax=Candidatus Kentron sp. FW TaxID=2126338 RepID=A0A450SP52_9GAMM)

HSP 1 Score: 78.6 bits (192), Expect = 1.450e-14
Identity = 47/121 (38.84%), Postives = 65/121 (53.72%), Query Frame = 0
Query:    6 LRGPVFDLLTPFTGEGEVDFTAFGDYLQFLSKAGVPTILCNGEAGEFASLTTDERKLLVEFARDSFSGTVLNHVSASALPDVTRLISHSSGKADGGSRTVADAVLVMPPCSSFGGSAGGRV 126
            + GP+F  +TPF  +   D  AF +YL FL KAGV +IL NG  GEF SLT +ER    E A+ +F+G V++ +S+    +   L   S           ADA+L++PP      S GG V
Sbjct:    7 INGPIFATVTPFNQDDNFDEMAFINYLAFLEKAGVKSILVNGTTGEFPSLTFEERVETCEIAKKNFNGNVISDISSCCYREANELARSSVD---------ADALLLLPPYYYDVRSEGGLV 118          
BLAST of mRNA_E-fasciculatus_F_contig12966.2247.1 vs. uniprot
Match: A0A7C1DNL0_9BACT (PRK domain-containing protein n=1 Tax=bacterium TaxID=1869227 RepID=A0A7C1DNL0_9BACT)

HSP 1 Score: 74.7 bits (182), Expect = 7.830e-13
Identity = 47/121 (38.84%), Postives = 64/121 (52.89%), Query Frame = 0
Query:    6 LRGPVFDLLTPFTGEGEVDFTAFGDYLQFLSKAGVPTILCNGEAGEFASLTTDERKLLVEFARDSFSGTVLNHVSASALPDVTRLISHSSGKADGGSRTVADAVLVMPPCSSFGGSAGGRV 126
            + G +  +LTPF   GE+D   F ++L+FL+KAGV  +L NG  GEF SL + ER+LL+  AR  F G +L      +L      I  +  + DG     AD VLV+PP    G    G V
Sbjct:  244 ISGLILPVLTPFNASGEIDQKYFIEHLEFLAKAGVGRVLVNGTTGEFFSLDSGERRLLLRLARTYFPGVILFQAGTESLIRTKAEIRWA--EEDG-----ADGVLVLPPYYFAGAPESGLV 357          
BLAST of mRNA_E-fasciculatus_F_contig12966.2247.1 vs. uniprot
Match: J2KNW5_9GAMM (Dihydrodipicolinate synthase/N-acetylneuraminate lyase n=15 Tax=Enterobacterales TaxID=91347 RepID=J2KNW5_9GAMM)

HSP 1 Score: 68.9 bits (167), Expect = 4.590e-11
Identity = 39/101 (38.61%), Postives = 59/101 (58.42%), Query Frame = 0
Query:   14 LTPFTGEGEVDFTAFGDYLQFLSKAGVPTILCNGEAGEFASLTTDERKLLVEFARDSFSGTVLNHVSASALPDVTRLISHSSGKADGGSRTVADAVLVMPP 114
            +TPF  +  +D  A G +   LS++G+ T+L  G  GEFASLT  ER LL+  AR     T++ +VS++ +PD+ +L       AD   +   DAV+V+PP
Sbjct:   15 VTPFDNKNNLDIEALGRHFSRLSQSGIDTLLLMGSIGEFASLTQQERLLLIHEARQLSPLTMVANVSSTCIPDMLQL-------ADAAWQNGFDAVMVLPP 108          
BLAST of mRNA_E-fasciculatus_F_contig12966.2247.1 vs. uniprot
Match: UPI0005B82211 (dihydrodipicolinate synthase family protein n=1 Tax=Nocardia abscessus TaxID=120957 RepID=UPI0005B82211)

HSP 1 Score: 62.8 bits (151), Expect = 2.380e-10
Identity = 30/53 (56.60%), Postives = 37/53 (69.81%), Query Frame = 0
Query:   13 LLTPFTGEGEVDFTAFGDYLQFLSKAGVPTILCNGEAGEFASLTTDERKLLVE 65
            ++TPF   G VDF A  DYL  L+ AGV TIL NG  GEFASLT+ ER+ ++E
Sbjct:    9 VVTPFRASGAVDFGALSDYLGLLAAAGVDTILVNGTTGEFASLTSGERRAVIE 61          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12966.2247.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYB5_ECTSI1.570e-8488.44Dihydrodipicolinate synthetase n=1 Tax=Ectocarpus ... [more]
A0A835YPJ8_9STRA1.170e-2948.18Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
UPI0019D8F2196.250e-2344.04Dihydrodipicolinate synthase family protein n=1 Ta... [more]
UPI001F49025D1.190e-2042.34dihydrodipicolinate synthase family protein n=1 Ta... [more]
UPI001894CAD92.790e-1840.14dihydrodipicolinate synthase family protein n=1 Ta... [more]
K0F0F0_9NOCA9.950e-1640.43Dihydrodipicolinate synthase n=2 Tax=Nocardia bras... [more]
A0A450SP52_9GAMM1.450e-1438.844-hydroxy-tetrahydrodipicolinate synthase n=2 Tax=... [more]
A0A7C1DNL0_9BACT7.830e-1338.84PRK domain-containing protein n=1 Tax=bacterium Ta... [more]
J2KNW5_9GAMM4.590e-1138.61Dihydrodipicolinate synthase/N-acetylneuraminate l... [more]
UPI0005B822112.380e-1056.60dihydrodipicolinate synthase family protein n=1 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013785Aldolase-type TIM barrelGENE3D3.20.20.70coord: 2..124
e-value: 2.0E-20
score: 74.9
IPR002220DapA-likePFAMPF00701DHDPScoord: 12..78
e-value: 8.6E-9
score: 34.5
IPR002220DapA-likePANTHERPTHR12128DIHYDRODIPICOLINATE SYNTHASEcoord: 5..115
NoneNo IPR availableSUPERFAMILY51569Aldolasecoord: 8..117

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12966contigE-fasciculatus_F_contig12966:1428..3549 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12966.2247.1mRNA_E-fasciculatus_F_contig12966.2247.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12966 1428..3549 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12966.2247.1 ID=prot_E-fasciculatus_F_contig12966.2247.1|Name=mRNA_E-fasciculatus_F_contig12966.2247.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=147bp
TGRLALRGPVFDLLTPFTGEGEVDFTAFGDYLQFLSKAGVPTILCNGEAG
EFASLTTDERKLLVEFARDSFSGTVLNHVSASALPDVTRLISHSSGKADG
GSRTVADAVLVMPPCSSFGGSAGGRVAERGGEEERGTEAFLRKALGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002220DapA-like
IPR013785Aldolase_TIM