prot_E-fasciculatus_F_contig12923.2215.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12923.2215.1
Unique Nameprot_E-fasciculatus_F_contig12923.2215.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length70
Homology
BLAST of mRNA_E-fasciculatus_F_contig12923.2215.1 vs. uniprot
Match: D8LJB4_ECTSI (Rab-GAP TBC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJB4_ECTSI)

HSP 1 Score: 145 bits (366), Expect = 4.380e-39
Identity = 69/70 (98.57%), Postives = 69/70 (98.57%), Query Frame = 0
Query:    1 MTDVSPLRNVLRCTSTFVPDVGYVQGMNFVCRSVLQVFPDEEEAFWVFVGMLQRFRLRELYCPGMPLLRL 70
            MTDVSPLRNVLRCTSTFVPDVGYVQGMNFVCRSVLQVF DEEEAFWVFVGMLQRFRLRELYCPGMPLLRL
Sbjct:  464 MTDVSPLRNVLRCTSTFVPDVGYVQGMNFVCRSVLQVFQDEEEAFWVFVGMLQRFRLRELYCPGMPLLRL 533          
BLAST of mRNA_E-fasciculatus_F_contig12923.2215.1 vs. uniprot
Match: A0A6H5JIN0_9PHAE (Rab-GAP TBC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIN0_9PHAE)

HSP 1 Score: 145 bits (366), Expect = 6.640e-39
Identity = 69/70 (98.57%), Postives = 69/70 (98.57%), Query Frame = 0
Query:    1 MTDVSPLRNVLRCTSTFVPDVGYVQGMNFVCRSVLQVFPDEEEAFWVFVGMLQRFRLRELYCPGMPLLRL 70
            MTDVSPLRNVLRCTSTFVPDVGYVQGMNFVCRSVLQVF DEEEAFWVFVGMLQRFRLRELYCPGMPLLRL
Sbjct:  694 MTDVSPLRNVLRCTSTFVPDVGYVQGMNFVCRSVLQVFQDEEEAFWVFVGMLQRFRLRELYCPGMPLLRL 763          
BLAST of mRNA_E-fasciculatus_F_contig12923.2215.1 vs. uniprot
Match: A0A7S2PZU8_9DINO (Hypothetical protein n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2PZU8_9DINO)

HSP 1 Score: 63.9 bits (154), Expect = 1.440e-10
Identity = 30/62 (48.39%), Postives = 43/62 (69.35%), Query Frame = 0
Query:    7 LRNVLRCTSTFVPDVGYVQGMNFVCRSVLQVFPDEEEAFWVFVGMLQRFRLRELYCPGMPLL 68
            L NVLR  S F P+VGY QGM F+C  VL ++  EE+AF + + +L  +R+ +L+ PG+PLL
Sbjct:   48 LLNVLRAYSVFNPEVGYCQGMGFIC-GVLLMYMCEEDAFLMLISLLDNYRMSKLFMPGLPLL 108          
BLAST of mRNA_E-fasciculatus_F_contig12923.2215.1 vs. uniprot
Match: A0A078A7X3_STYLE (Tbc domain-containing protein n=1 Tax=Stylonychia lemnae TaxID=5949 RepID=A0A078A7X3_STYLE)

HSP 1 Score: 63.5 bits (153), Expect = 4.270e-10
Identity = 28/61 (45.90%), Postives = 42/61 (68.85%), Query Frame = 0
Query:   10 VLRCTSTFVPDVGYVQGMNFVCRSVLQVFPDEEEAFWVFVGMLQRFRLRELYCPGMPLLRL 70
            VLR  +  +P VGYVQG NF+  S++++  +EE+ FW+F+ +L    L +LY  GMPLL+L
Sbjct:  880 VLRAVAYHMPQVGYVQGFNFIAGSLMKLLKNEEQVFWMFINILTWRGLYQLYTDGMPLLKL 940          
BLAST of mRNA_E-fasciculatus_F_contig12923.2215.1 vs. uniprot
Match: A0A7R9Z0I5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9Z0I5_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 4.110e-9
Identity = 33/64 (51.56%), Postives = 40/64 (62.50%), Query Frame = 0
Query:    4 VSPLRNVLRCTSTFVPDVGYVQGMNFVCRSVLQVFPDEEEAFWVFVGMLQR--FRLRELYCPGM 65
            ++ LR VLR  ST+ PDVGY QGMNFV    L  F  EEEAFW+ V ++     R+R LY  GM
Sbjct:   51 IAALRRVLRAYSTYDPDVGYCQGMNFVAAMFL-TFMSEEEAFWLLVHVMNEEPCRMRGLYGEGM 113          
BLAST of mRNA_E-fasciculatus_F_contig12923.2215.1 vs. uniprot
Match: A0A813HJZ4_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813HJZ4_POLGL)

HSP 1 Score: 60.1 bits (144), Expect = 6.160e-9
Identity = 28/62 (45.16%), Postives = 42/62 (67.74%), Query Frame = 0
Query:    7 LRNVLRCTSTFVPDVGYVQGMNFVCRSVLQVFPDEEEAFWVFVGMLQRFRLRELYCPGMPLL 68
            L NVLR  S F P+VGY QGM F+C  VL ++  E++AF + + +L+ +R+  L+ P +PLL
Sbjct:  133 LLNVLRAYSVFNPEVGYCQGMGFIC-GVLLMYMCEDDAFLMLISLLENYRMAGLFMPNLPLL 193          
BLAST of mRNA_E-fasciculatus_F_contig12923.2215.1 vs. uniprot
Match: A0A1E3P8T4_WICAA (Rab-GAP TBC domain-containing protein n=1 Tax=Wickerhamomyces anomalus (strain ATCC 58044 / CBS 1984 / NCYC 433 / NRRL Y-366-8) TaxID=683960 RepID=A0A1E3P8T4_WICAA)

HSP 1 Score: 59.3 bits (142), Expect = 1.300e-8
Identity = 23/55 (41.82%), Postives = 38/55 (69.09%), Query Frame = 0
Query:    7 LRNVLRCTSTFVPDVGYVQGMNFVCRSVLQVFPDEEEAFWVFVGMLQRFRLRELY 61
            L+N+L   S   P++GY QGMNF+  ++L V+P+EEEAFW F+G++     ++ +
Sbjct:  488 LKNILIAFSRKYPNIGYCQGMNFIAANLLLVYPNEEEAFWAFIGLVDNVLPKDFF 542          
BLAST of mRNA_E-fasciculatus_F_contig12923.2215.1 vs. uniprot
Match: A0A6P6RTB0_9EIME (ecotropic viral integration site 5 protein homolog n=1 Tax=Cyclospora cayetanensis TaxID=88456 RepID=A0A6P6RTB0_9EIME)

HSP 1 Score: 58.9 bits (141), Expect = 1.590e-8
Identity = 31/62 (50.00%), Postives = 41/62 (66.13%), Query Frame = 0
Query:    7 LRNVLRCTSTFVPDVGYVQGMNFVCRSVLQVFPDEEEAFWVFVGMLQRFRLRELYCPGMPLL 68
            L  VL+  + F PDVGY QGM FVC  VL +  +E EAF +   +L++F L+ LY PG+PLL
Sbjct:  111 LFKVLKAYAAFSPDVGYCQGMGFVC-GVLLLHMEEAEAFTLLACLLKKFCLKGLYQPGLPLL 171          
BLAST of mRNA_E-fasciculatus_F_contig12923.2215.1 vs. uniprot
Match: A0A7S1ALD3_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1ALD3_NOCSC)

HSP 1 Score: 58.9 bits (141), Expect = 1.660e-8
Identity = 28/62 (45.16%), Postives = 42/62 (67.74%), Query Frame = 0
Query:    7 LRNVLRCTSTFVPDVGYVQGMNFVCRSVLQVFPDEEEAFWVFVGMLQRFRLRELYCPGMPLL 68
            L +VLR  S F P+VGY QGM FVC  VL ++  E++AF + + +L+ +R+  L+ P +PLL
Sbjct:  157 LLSVLRAYSVFNPEVGYCQGMGFVC-GVLLMYMREDDAFLMLISLLENYRMAGLFMPNLPLL 217          
BLAST of mRNA_E-fasciculatus_F_contig12923.2215.1 vs. uniprot
Match: A0A8J4PMA1_9MYCE (Rab-GAP TBC domain-containing protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PMA1_9MYCE)

HSP 1 Score: 58.9 bits (141), Expect = 1.770e-8
Identity = 27/63 (42.86%), Postives = 39/63 (61.90%), Query Frame = 0
Query:    7 LRNVLRCTSTFVPDVGYVQGMNFVCRSVLQVFPDEEEAFWVFVGMLQRFRLRELYCPGMPLLR 69
            L N+L+  S   P++GY QGM+F+C  +L    DE E FWVF  +++ F+L  LY   + LLR
Sbjct:  354 LFNILKAYSIMDPEIGYTQGMSFICAVILSEM-DELETFWVFTSVMKNFKLSSLYSNDLSLLR 415          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12923.2215.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJB4_ECTSI4.380e-3998.57Rab-GAP TBC domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5JIN0_9PHAE6.640e-3998.57Rab-GAP TBC domain-containing protein n=1 Tax=Ecto... [more]
A0A7S2PZU8_9DINO1.440e-1048.39Hypothetical protein n=1 Tax=Brandtodinium nutricu... [more]
A0A078A7X3_STYLE4.270e-1045.90Tbc domain-containing protein n=1 Tax=Stylonychia ... [more]
A0A7R9Z0I5_9STRA4.110e-951.56Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]
A0A813HJZ4_POLGL6.160e-945.16Hypothetical protein n=1 Tax=Polarella glacialis T... [more]
A0A1E3P8T4_WICAA1.300e-841.82Rab-GAP TBC domain-containing protein n=1 Tax=Wick... [more]
A0A6P6RTB0_9EIME1.590e-850.00ecotropic viral integration site 5 protein homolog... [more]
A0A7S1ALD3_NOCSC1.660e-845.16Hypothetical protein n=1 Tax=Noctiluca scintillans... [more]
A0A8J4PMA1_9MYCE1.770e-842.86Rab-GAP TBC domain-containing protein n=1 Tax=Poly... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000195Rab-GTPase-TBC domainPFAMPF00566RabGAP-TBCcoord: 7..68
e-value: 8.9E-18
score: 64.7
IPR000195Rab-GTPase-TBC domainPROSITEPS50086TBC_RABGAPcoord: 1..70
score: 13.374
NoneNo IPR availableGENE3D1.10.8.270coord: 2..63
e-value: 4.1E-14
score: 54.2
NoneNo IPR availablePANTHERPTHR22957TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEINcoord: 6..56
IPR035969Rab-GTPase-TBC domain superfamilySUPERFAMILY47923Ypt/Rab-GAP domain of gyp1pcoord: 7..68

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12923contigE-fasciculatus_F_contig12923:112..663 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12923.2215.1mRNA_E-fasciculatus_F_contig12923.2215.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12923 112..663 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12923.2215.1 ID=prot_E-fasciculatus_F_contig12923.2215.1|Name=mRNA_E-fasciculatus_F_contig12923.2215.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=70bp
MTDVSPLRNVLRCTSTFVPDVGYVQGMNFVCRSVLQVFPDEEEAFWVFVG
MLQRFRLRELYCPGMPLLRL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035969Rab-GTPase_TBC_sf
IPR000195Rab-GTPase-TBC_dom