prot_E-fasciculatus_F_contig12854.2154.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12854.2154.1
Unique Nameprot_E-fasciculatus_F_contig12854.2154.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length179
Homology
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BLAST of mRNA_E-fasciculatus_F_contig12854.2154.1 vs. uniprot
Match: D8LFE0_ECTSI (DNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFE0_ECTSI)

HSP 1 Score: 368 bits (944), Expect = 2.170e-118
Identity = 177/179 (98.88%), Postives = 179/179 (100.00%), Query Frame = 0 
Query:    1 LLQKPLKERRRLLRSTFKEVDGRFRFATFMDHKEDGDTGPIEEFLSEAVKGNCEGLMVKTLTANSSYEPSKRSLNWLKLKKDYLQADGGGVGDSLDLVPIGAFFGEGKRTGKYGAYLLACYEPDREEYQSVCKIGTGFTDEILNSFWEELKEHTVEQRPRYYNVADSLSPDVWLAPHKV 179
            LLQKPLK+RRRLLRSTFKEVDGRFRFATFMDHKEDGDTGPIEEFLSEAVKGNCEGLMVKTLTANSSYEPSKRSLNWLKLKKDYLQADGGGVGDSLDLVPIGAFFG+GKRTGKYGAYLLACYEPDREEYQSVCKIGTGFTDEILNSFWEELKEHTVEQRPRYYNVADSLSPDVWLAPHKV
Sbjct:  782 LLQKPLKQRRRLLRSTFKEVDGRFRFATFMDHKEDGDTGPIEEFLSEAVKGNCEGLMVKTLTANSSYEPSKRSLNWLKLKKDYLQADGGGVGDSLDLVPIGAFFGKGKRTGKYGAYLLACYEPDREEYQSVCKIGTGFTDEILNSFWEELKEHTVEQRPRYYNVADSLSPDVWLAPHKV 960
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BLAST of mRNA_E-fasciculatus_F_contig12854.2154.1 vs. uniprot
Match: A0A836CMS0_9STRA (DNA ligase (ATP) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMS0_9STRA)

HSP 1 Score: 248 bits (632), Expect = 8.860e-76
Identity = 119/179 (66.48%), Postives = 143/179 (79.89%), Query Frame = 0 
Query:    1 LLQKPLKERRRLLRSTFKEVDGRFRFATFMDHKEDGDTGPIEEFLSEAVKGNCEGLMVKTLTANSSYEPSKRSLNWLKLKKDYLQADGGGVGDSLDLVPIGAFFGEGKRTGKYGAYLLACYEPDREEYQSVCKIGTGFTDEILNSFWEELKEHTVEQRPRYYNVADSLSPDVWLAPHKV 179
            LLQ+PL+ RR  L + FKE  G F FA  +D++E+GDT PIE F++EAVKGNCEGLMVKTLT N++YEPS+RSLNWLKLKKDYL  DG  V DSLDLVPIGA++G GKR G +GAYLLACYEPD EEYQSVCKIGTGF++E L +    LK H +E++P Y+NV D++ PDVWL P KV
Sbjct:  389 LLQEPLQARREALHAAFKESPGHFGFAISLDYQENGDTEPIEAFMAEAVKGNCEGLMVKTLTHNATYEPSRRSLNWLKLKKDYLD-DGSSVADSLDLVPIGAYYGRGKRAGAFGAYLLACYEPDAEEYQSVCKIGTGFSNERLLALDAMLKAHVIERKPSYFNVGDTIEPDVWLEPCKV 566
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BLAST of mRNA_E-fasciculatus_F_contig12854.2154.1 vs. uniprot
Match: A0A7S4N564_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N564_9STRA)

HSP 1 Score: 236 bits (602), Expect = 1.920e-75
Identity = 111/174 (63.79%), Postives = 137/174 (78.74%), Query Frame = 0 
Query:    1 LLQKPLKERRRLLRSTFKEVDGRFRFATFMDHKEDGDTGPIEEFLSEAVKGNCEGLMVKTLTANSSYEPSKRSLNWLKLKKDYLQADGGGVGDSLDLVPIGAFFGEGKRTGKYGAYLLACYEPDREEYQSVCKIGTGFTDEILNSFWEELKEHTVEQRPRYYNVADSLSPDVWL 174
            LL K L ERR LLRS F+ VDG+F+FA  +DH EDGDT  +EEFL  AVKG CEGLMVKTL  N++YEPS+RSLNWLKLKKDYL+    G+GDS+DLVP+GA++G+GKRTG YGAYLL CY+PD EE+QSVCKIGTGF+DE L +  ++L  H +  +   YNV+++L PDVW 
Sbjct:   40 LLDKTLSERRELLRSNFQPVDGKFQFAKSLDHTEDGDTAILEEFLEAAVKGQCEGLMVKTLDTNAAYEPSRRSLNWLKLKKDYLE----GLGDSVDLVPLGAYWGKGKRTGVYGAYLLGCYDPDSEEFQSVCKIGTGFSDEALQTLSKDLNGHKIPTKTSQYNVSETLEPDVWF 209
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BLAST of mRNA_E-fasciculatus_F_contig12854.2154.1 vs. uniprot
Match: A0A7S2P3Z2_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2P3Z2_9STRA)

HSP 1 Score: 231 bits (589), Expect = 7.120e-73
Identity = 112/174 (64.37%), Postives = 134/174 (77.01%), Query Frame = 0 
Query:    1 LLQKPLKERRRLLRSTFKEVDGRFRFATFMDHKEDGDTGPIEEFLSEAVKGNCEGLMVKTLTANSSYEPSKRSLNWLKLKKDYLQADGGGVGDSLDLVPIGAFFGEGKRTGKYGAYLLACYEPDREEYQSVCKIGTGFTDEILNSFWEELKEHTVEQRPRYYNVADSLSPDVWL 174
            LL +PL ERR LL   F  VDG+F+FAT +DH E+GDT  IEEFL  AVKG CEGLMVKTL  N++YEPS+RSLNWLKLKKDYL+    G+GDS+DLVPIGA+ G+GKRTG YGAYLLACY+ D EE+QSVCKIGTGF+DE L      L + T+ ++   YNV+DSL+ DVW 
Sbjct:   75 LLDRPLAERRELLHKNFAPVDGKFQFATALDHTENGDTALIEEFLENAVKGQCEGLMVKTLDVNAAYEPSRRSLNWLKLKKDYLE----GLGDSVDLVPIGAYHGKGKRTGVYGAYLLACYDEDSEEFQSVCKIGTGFSDENLKELAASLNKSTIPEKSSQYNVSDSLACDVWF 244
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BLAST of mRNA_E-fasciculatus_F_contig12854.2154.1 vs. uniprot
Match: A0A7S3LA35_9STRA (DNA ligase n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LA35_9STRA)

HSP 1 Score: 229 bits (585), Expect = 1.570e-70
Identity = 110/174 (63.22%), Postives = 134/174 (77.01%), Query Frame = 0 
Query:    1 LLQKPLKERRRLLRSTFKEVDGRFRFATFMDHKEDGDTGPIEEFLSEAVKGNCEGLMVKTLTANSSYEPSKRSLNWLKLKKDYLQADGGGVGDSLDLVPIGAFFGEGKRTGKYGAYLLACYEPDREEYQSVCKIGTGFTDEILNSFWEELKEHTVEQRPRYYNVADSLSPDVWL 174
            LL   L  RR LL+  F  V+G+F+FA  MDH+EDGDT  IEEFL +AVKG CEGLMVKTL  N++YEPSKRSLNWLKLKKDYL+    G+GDS+DLVP+GA+ G GKRTG YGAYLLACY+PD EE+QSVCKIGTGF+DE L +  ++L +H + ++   YNV+D L  DVW 
Sbjct:  221 LLNTTLAHRRELLKKHFVPVEGKFQFAVSMDHQEDGDTTVIEEFLDQAVKGQCEGLMVKTLEENANYEPSKRSLNWLKLKKDYLE----GLGDSVDLVPLGAYHGRGKRTGVYGAYLLACYDPDTEEFQSVCKIGTGFSDEDLKNLADKLNQHVIPKKSAQYNVSDQLECDVWF 390
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BLAST of mRNA_E-fasciculatus_F_contig12854.2154.1 vs. uniprot
Match: A0A7S2YG65_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YG65_9STRA)

HSP 1 Score: 221 bits (564), Expect = 4.470e-70
Identity = 104/169 (61.54%), Postives = 130/169 (76.92%), Query Frame = 0 
Query:    6 LKERRRLLRSTFKEVDGRFRFATFMDHKEDGDTGPIEEFLSEAVKGNCEGLMVKTLTANSSYEPSKRSLNWLKLKKDYLQADGGGVGDSLDLVPIGAFFGEGKRTGKYGAYLLACYEPDREEYQSVCKIGTGFTDEILNSFWEELKEHTVEQRPRYYNVADSLSPDVWL 174
            L ERR+L+   F+ ++G+F+FA F+DH EDGDT  +EEFL +AVKG CEGLMVKTL  N+ YEPS+RSLNWLKLKKDYL+    G+GDS+DLVP+GA+ G+GKRTG YGAYLLACY+ + EE+QSVCKIGTGF+DE L +  E L +H +  +   YNV D L  DVW 
Sbjct:    3 LAERRQLMLEHFQPIEGKFQFAQFLDHTEDGDTAVLEEFLDQAVKGQCEGLMVKTLEVNAIYEPSRRSLNWLKLKKDYLE----GLGDSVDLVPLGAYHGKGKRTGFYGAYLLACYDAESEEFQSVCKIGTGFSDEDLKTLAETLNKHVIPTKSSQYNVTDQLECDVWF 167
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BLAST of mRNA_E-fasciculatus_F_contig12854.2154.1 vs. uniprot
Match: A0A7S3Y279_HETAK (DNA ligase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y279_HETAK)

HSP 1 Score: 230 bits (586), Expect = 1.230e-68
Identity = 110/178 (61.80%), Postives = 135/178 (75.84%), Query Frame = 0 
Query:    2 LQKPLKERRRLLRSTFKEVDGRFRFATFMDHKEDGDTGPIEEFLSEAVKGNCEGLMVKTLTANSSYEPSKRSLNWLKLKKDYLQADGGGVGDSLDLVPIGAFFGEGKRTGKYGAYLLACYEPDREEYQSVCKIGTGFTDEILNSFWEELKEHTVEQRPRYYNVADSLSPDVWLAPHKV 179
            LQ+ L+ RR  LR  F+E +GRF FA  MDH EDGDT P+E+FL E+VK  CEGLMVKTL  NS+YEPS+RSLNWLKLKKDYL  D  GV DS+D+VPIGA+ G+GKRTG YGAYLLACY+P+ E++QS+CKIGTGF+DE L +  EE+KE  + + P  Y   +SL  DVW +  KV
Sbjct:  439 LQETLEARRAALRGCFEEAEGRFMFAVSMDHTEDGDTAPVEQFLEESVKAACEGLMVKTLVENSAYEPSRRSLNWLKLKKDYL--DNMGVADSVDVVPIGAYMGKGKRTGVYGAYLLACYDPETEDFQSLCKIGTGFSDEALRALTEEMKEFVIPKAPANYMYGESLEADVWFSASKV 614
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BLAST of mRNA_E-fasciculatus_F_contig12854.2154.1 vs. uniprot
Match: B8BW47_THAPS (DNA ligase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BW47_THAPS)

HSP 1 Score: 224 bits (570), Expect = 9.010e-67
Identity = 109/174 (62.64%), Postives = 130/174 (74.71%), Query Frame = 0 
Query:    1 LLQKPLKERRRLLRSTFKEVDGRFRFATFMDHKEDGDTGPIEEFLSEAVKGNCEGLMVKTLTANSSYEPSKRSLNWLKLKKDYLQADGGGVGDSLDLVPIGAFFGEGKRTGKYGAYLLACYEPDREEYQSVCKIGTGFTDEILNSFWEELKEHTVEQRPRYYNVADSLSPDVWL 174
            LL +PL ERR L+R  F  V G+F+FAT +DH EDGDT  +EEFL  AVKG CEGLMVKTL  N++YEPS+RSLNWLKLKKDYL+    G+GDS+DLVP+GA+ G GKRTG YGAYLLA YE D EE+QSVCKIGTGF++E L      LK H + ++   Y V+DSL  DVW 
Sbjct:  383 LLDRPLAERRELMRKNFIPVPGKFQFATSLDHTEDGDTAVVEEFLDNAVKGQCEGLMVKTLDVNAAYEPSRRSLNWLKLKKDYLE----GLGDSVDLVPLGAYHGRGKRTGVYGAYLLAVYEEDTEEFQSVCKIGTGFSEEDLKELAASLKPHIIPEKSSQYVVSDSLECDVWF 552
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BLAST of mRNA_E-fasciculatus_F_contig12854.2154.1 vs. uniprot
Match: A0A196S7A1_BLAHN (DNA ligase 1 (Fragment) n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196S7A1_BLAHN)

HSP 1 Score: 213 bits (542), Expect = 4.710e-66
Identity = 109/180 (60.56%), Postives = 136/180 (75.56%), Query Frame = 0 
Query:    1 LLQKPLKERRRLLRSTFKEVDGRFRFATFMDHKEDGDTGPIEEFLSEAVKGNCEGLMVKTLTANSSYEPSKRSLNWLKLKKDYLQADGGGVGDSLDLVPIGAFFGEGKRTGKYGAYLLACYEPDREEYQSVCKIGTGFTDEILNSFWEELK-EHTVEQRPRYYNVADSLSPDVWLAPHKV 179
            ++Q+PLKERR LLRST  EV GR +FAT    +E  DT  I+EFL E+V   CEGLMVKTLT N++YEPSKRSLNWLKLKKDYLQ     +GDSLDLVPIG ++G+GKRTG +GA+LLACY+ + EE+QSVCK+GTGF+DE L++       E+ VE++P  YNV  S+ PDVW  P +V
Sbjct:   67 VIQRPLKERRALLRSTIHEVPGRMQFAT---SRELADTEEIQEFLMESVNAGCEGLMVKTLTENATYEPSKRSLNWLKLKKDYLQD----LGDSLDLVPIGGYYGKGKRTGNFGAFLLACYDVNSEEFQSVCKLGTGFSDEALHAHSAFFSGENVVEKKPVDYNVVPSMEPDVWFKPVQV 239
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BLAST of mRNA_E-fasciculatus_F_contig12854.2154.1 vs. uniprot
Match: K0SNZ5_THAOC (DNA ligase (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SNZ5_THAOC)

HSP 1 Score: 222 bits (565), Expect = 1.640e-65
Identity = 107/174 (61.49%), Postives = 131/174 (75.29%), Query Frame = 0 
Query:    1 LLQKPLKERRRLLRSTFKEVDGRFRFATFMDHKEDGDTGPIEEFLSEAVKGNCEGLMVKTLTANSSYEPSKRSLNWLKLKKDYLQADGGGVGDSLDLVPIGAFFGEGKRTGKYGAYLLACYEPDREEYQSVCKIGTGFTDEILNSFWEELKEHTVEQRPRYYNVADSLSPDVWL 174
            LL KPL  RR LL   F  V+G+F++AT +DH EDG+T  IEEFL  AVKG CEGLMVKTL  N+ YEP +RSLNWLKLKKDYL+    G+GDS+DLVP+GA+ G GKRTG YGAYLLACY+ D EE+QSVCKIGTGF++E L S   +LK H + ++   Y V+D+L+ DVW 
Sbjct:  400 LLDKPLSHRRELLHKNFLPVEGKFQYATALDHTEDGETAVIEEFLDAAVKGQCEGLMVKTLDVNAVYEPDRRSLNWLKLKKDYLE----GLGDSVDLVPLGAYHGRGKRTGVYGAYLLACYDYDTEEFQSVCKIGTGFSEEDLKSLAADLKGHVIPEKSSQYVVSDTLACDVWF 569
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12854.2154.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFE0_ECTSI2.170e-11898.88DNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8L... [more]
A0A836CMS0_9STRA8.860e-7666.48DNA ligase (ATP) n=1 Tax=Tribonema minus TaxID=303... [more]
A0A7S4N564_9STRA1.920e-7563.79Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
A0A7S2P3Z2_9STRA7.120e-7364.37Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7S3LA35_9STRA1.570e-7063.22DNA ligase n=1 Tax=Amphora coffeiformis TaxID=2655... [more]
A0A7S2YG65_9STRA4.470e-7061.54Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A7S3Y279_HETAK1.230e-6861.80DNA ligase n=1 Tax=Heterosigma akashiwo TaxID=2829... [more]
B8BW47_THAPS9.010e-6762.64DNA ligase n=1 Tax=Thalassiosira pseudonana TaxID=... [more]
A0A196S7A1_BLAHN4.710e-6660.56DNA ligase 1 (Fragment) n=1 Tax=Blastocystis sp. s... [more]
K0SNZ5_THAOC1.640e-6561.49DNA ligase (Fragment) n=1 Tax=Thalassiosira oceani... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.50.140coord: 93..179
e-value: 1.0E-29
score: 105.7
NoneNo IPR availableGENE3D3.30.1490.70coord: 3..88
e-value: 8.1E-23
score: 82.7
NoneNo IPR availablePANTHERPTHR45674:SF4DNA LIGASE 1coord: 1..179
NoneNo IPR availablePANTHERPTHR45674FAMILY NOT NAMEDcoord: 1..179
NoneNo IPR availableSUPERFAMILY56091DNA ligase/mRNA capping enzyme, catalytic domaincoord: 1..82
IPR012309DNA ligase, ATP-dependent, C-terminalPFAMPF04679DNA_ligase_A_Ccoord: 109..179
e-value: 1.1E-12
score: 48.4
IPR012310DNA ligase, ATP-dependent, centralPFAMPF01068DNA_ligase_A_Mcoord: 1..80
e-value: 4.6E-15
score: 55.8
IPR012310DNA ligase, ATP-dependent, centralPROSITEPS50160DNA_LIGASE_A3coord: 1..122
score: 35.593
IPR016059DNA ligase, ATP-dependent, conserved sitePROSITEPS00333DNA_LIGASE_A2coord: 54..80
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 92..179

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12854contigE-fasciculatus_F_contig12854:983..3619 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12854.2154.1mRNA_E-fasciculatus_F_contig12854.2154.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12854 983..3619 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12854.2154.1 ID=prot_E-fasciculatus_F_contig12854.2154.1|Name=mRNA_E-fasciculatus_F_contig12854.2154.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=179bp
LLQKPLKERRRLLRSTFKEVDGRFRFATFMDHKEDGDTGPIEEFLSEAVK
GNCEGLMVKTLTANSSYEPSKRSLNWLKLKKDYLQADGGGVGDSLDLVPI
GAFFGEGKRTGKYGAYLLACYEPDREEYQSVCKIGTGFTDEILNSFWEEL
KEHTVEQRPRYYNVADSLSPDVWLAPHKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012340NA-bd_OB-fold
IPR016059DNA_ligase_ATP-dep_CS
IPR012310DNA_ligase_ATP-dep_cent
IPR012309DNA_ligase_ATP-dep_C