prot_E-fasciculatus_F_contig12854.2153.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12854.2153.1
Unique Nameprot_E-fasciculatus_F_contig12854.2153.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length42
Homology
BLAST of mRNA_E-fasciculatus_F_contig12854.2153.1 vs. uniprot
Match: D8LFE0_ECTSI (DNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFE0_ECTSI)

HSP 1 Score: 66.2 bits (160), Expect = 1.400e-11
Identity = 32/32 (100.00%), Postives = 32/32 (100.00%), Query Frame = 0
Query:    1 MLSTRGRKDVDAEDVKVKVIVEAFDMLYLNGQ 32
            MLSTRGRKDVDAEDVKVKVIVEAFDMLYLNGQ
Sbjct:  749 MLSTRGRKDVDAEDVKVKVIVEAFDMLYLNGQ 780          
BLAST of mRNA_E-fasciculatus_F_contig12854.2153.1 vs. uniprot
Match: UPI001C4BC19B (DNA ligase 1 isoform X1 n=2 Tax=Sceloporus undulatus TaxID=8520 RepID=UPI001C4BC19B)

HSP 1 Score: 52.8 bits (125), Expect = 7.950e-7
Identity = 24/32 (75.00%), Postives = 29/32 (90.62%), Query Frame = 0
Query:    1 MLSTRGRKDVDAEDVKVKVIVEAFDMLYLNGQ 32
            +L+TR RKDVDAED++V+V V AFDMLYLNGQ
Sbjct:  634 VLTTRKRKDVDAEDIRVQVCVYAFDMLYLNGQ 665          
BLAST of mRNA_E-fasciculatus_F_contig12854.2153.1 vs. uniprot
Match: A0A2R5G8P8_9STRA (DNA ligase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G8P8_9STRA)

HSP 1 Score: 51.2 bits (121), Expect = 2.780e-6
Identity = 24/32 (75.00%), Postives = 29/32 (90.62%), Query Frame = 0
Query:    1 MLSTRGRKDVDAEDVKVKVIVEAFDMLYLNGQ 32
            +LSTR RKDV+ EDVKVKVIV AFD+L+LNG+
Sbjct:  995 ILSTRARKDVNIEDVKVKVIVCAFDLLFLNGE 1026          
BLAST of mRNA_E-fasciculatus_F_contig12854.2153.1 vs. uniprot
Match: H9GHC9_ANOCA (DNA ligase n=2 Tax=Anolis carolinensis TaxID=28377 RepID=H9GHC9_ANOCA)

HSP 1 Score: 51.2 bits (121), Expect = 2.780e-6
Identity = 23/32 (71.88%), Postives = 28/32 (87.50%), Query Frame = 0
Query:    1 MLSTRGRKDVDAEDVKVKVIVEAFDMLYLNGQ 32
            +L+TR RKDVD ED++V+V V AFDMLYLNGQ
Sbjct:  633 VLTTRKRKDVDTEDIRVQVCVYAFDMLYLNGQ 664          
BLAST of mRNA_E-fasciculatus_F_contig12854.2153.1 vs. uniprot
Match: A0A803T1K7_ANOCA (DNA ligase n=1 Tax=Anolis carolinensis TaxID=28377 RepID=A0A803T1K7_ANOCA)

HSP 1 Score: 51.2 bits (121), Expect = 2.790e-6
Identity = 23/32 (71.88%), Postives = 28/32 (87.50%), Query Frame = 0
Query:    1 MLSTRGRKDVDAEDVKVKVIVEAFDMLYLNGQ 32
            +L+TR RKDVD ED++V+V V AFDMLYLNGQ
Sbjct:  375 VLTTRKRKDVDTEDIRVQVCVYAFDMLYLNGQ 406          
BLAST of mRNA_E-fasciculatus_F_contig12854.2153.1 vs. uniprot
Match: A0A5N6KRT3_9ROSI (DNA ligase n=1 Tax=Carpinus fangiana TaxID=176857 RepID=A0A5N6KRT3_9ROSI)

HSP 1 Score: 49.3 bits (116), Expect = 1.330e-5
Identity = 24/33 (72.73%), Postives = 26/33 (78.79%), Query Frame = 0
Query:    2 LSTRGRKDVDAEDVKVKVIVEAFDMLYLNGQVC 34
            L TR RKDV  EDVKVKV V AFD+L+LNGQ C
Sbjct:  661 LMTRKRKDVKVEDVKVKVCVFAFDILFLNGQPC 693          
BLAST of mRNA_E-fasciculatus_F_contig12854.2153.1 vs. uniprot
Match: F0U8I5_AJEC8 (DNA ligase n=1 Tax=Ajellomyces capsulatus (strain H88) TaxID=544711 RepID=F0U8I5_AJEC8)

HSP 1 Score: 49.3 bits (116), Expect = 1.330e-5
Identity = 25/38 (65.79%), Postives = 30/38 (78.95%), Query Frame = 0
Query:    2 LSTRGRKDVDAEDVKVKVIVEAFDMLYLNGQVCGVYVS 39
            L TR RKDV AEDVKVKV V AFD+L+LNG+V   Y++
Sbjct:  733 LMTRKRKDVKAEDVKVKVCVFAFDLLFLNGEVKKDYLA 770          
BLAST of mRNA_E-fasciculatus_F_contig12854.2153.1 vs. uniprot
Match: A0A6G1L4U2_9PEZI (DNA ligase n=1 Tax=Teratosphaeria nubilosa TaxID=161662 RepID=A0A6G1L4U2_9PEZI)

HSP 1 Score: 49.3 bits (116), Expect = 1.330e-5
Identity = 24/31 (77.42%), Postives = 26/31 (83.87%), Query Frame = 0
Query:    2 LSTRGRKDVDAEDVKVKVIVEAFDMLYLNGQ 32
            L TR RKDV AEDVKVKV V AFD+LYLNG+
Sbjct:  652 LMTRKRKDVKAEDVKVKVCVFAFDLLYLNGE 682          
BLAST of mRNA_E-fasciculatus_F_contig12854.2153.1 vs. uniprot
Match: UPI001E8CD376 (DNA ligase n=1 Tax=Emericellopsis atlantica TaxID=2614577 RepID=UPI001E8CD376)

HSP 1 Score: 49.3 bits (116), Expect = 1.330e-5
Identity = 24/31 (77.42%), Postives = 26/31 (83.87%), Query Frame = 0
Query:    2 LSTRGRKDVDAEDVKVKVIVEAFDMLYLNGQ 32
            L TR RKDV AEDVKVKV V AFD+LYLNG+
Sbjct:  577 LMTRKRKDVKAEDVKVKVCVFAFDLLYLNGE 607          
BLAST of mRNA_E-fasciculatus_F_contig12854.2153.1 vs. uniprot
Match: A0A7S2W3T2_9STRA (DNA ligase (Fragment) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2W3T2_9STRA)

HSP 1 Score: 49.3 bits (116), Expect = 1.340e-5
Identity = 24/32 (75.00%), Postives = 28/32 (87.50%), Query Frame = 0
Query:    1 MLSTRGRKDVDAEDVKVKVIVEAFDMLYLNGQ 32
            +LSTR RKDV A DVKVKV+V AFD+LYLNG+
Sbjct:  461 ILSTRSRKDVAAGDVKVKVMVCAFDLLYLNGR 492          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12854.2153.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFE0_ECTSI1.400e-11100.00DNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8L... [more]
UPI001C4BC19B7.950e-775.00DNA ligase 1 isoform X1 n=2 Tax=Sceloporus undulat... [more]
A0A2R5G8P8_9STRA2.780e-675.00DNA ligase n=1 Tax=Hondaea fermentalgiana TaxID=23... [more]
H9GHC9_ANOCA2.780e-671.88DNA ligase n=2 Tax=Anolis carolinensis TaxID=28377... [more]
A0A803T1K7_ANOCA2.790e-671.88DNA ligase n=1 Tax=Anolis carolinensis TaxID=28377... [more]
A0A5N6KRT3_9ROSI1.330e-572.73DNA ligase n=1 Tax=Carpinus fangiana TaxID=176857 ... [more]
F0U8I5_AJEC81.330e-565.79DNA ligase n=1 Tax=Ajellomyces capsulatus (strain ... [more]
A0A6G1L4U2_9PEZI1.330e-577.42DNA ligase n=1 Tax=Teratosphaeria nubilosa TaxID=1... [more]
UPI001E8CD3761.330e-577.42DNA ligase n=1 Tax=Emericellopsis atlantica TaxID=... [more]
A0A7S2W3T2_9STRA1.340e-575.00DNA ligase (Fragment) n=1 Tax=labyrinthulid quahog... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.470.30coord: 1..37
e-value: 1.0E-7
score: 33.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12854contigE-fasciculatus_F_contig12854:13..138 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12854.2153.1mRNA_E-fasciculatus_F_contig12854.2153.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12854 4..138 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12854.2153.1 ID=prot_E-fasciculatus_F_contig12854.2153.1|Name=mRNA_E-fasciculatus_F_contig12854.2153.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=42bp
MLSTRGRKDVDAEDVKVKVIVEAFDMLYLNGQVCGVYVSLG*
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