prot_E-fasciculatus_F_contig12853.2152.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig12853.2152.1
Unique Nameprot_E-fasciculatus_F_contig12853.2152.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length173
Homology
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BLAST of mRNA_E-fasciculatus_F_contig12853.2152.1 vs. uniprot
Match: A0A6H5JJY2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJY2_9PHAE)

HSP 1 Score: 77.4 bits (189), Expect = 5.390e-14
Identity = 54/77 (70.13%), Postives = 55/77 (71.43%), Query Frame = 0 
Query:  102 SLLPSVSDLFSSTAGPDFLNAPGAGQDFVVKAMKKXXXXXXXXXXXXXXXXXXXXXXXXX-----TAKRERDVAAGV 173
            SLLPSVSDLFSSTAGPDFLNAPGAGQDF+VKAMKK                 XXXXXXXX     TAKRERDVAAGV
Sbjct:  118 SLLPSVSDLFSSTAGPDFLNAPGAGQDFIVKAMKKEKKKQTAAEATTGDPTAXXXXXXXXXXXGATAKRERDVAAGV 194
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig12853.2152.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JJY2_9PHAE5.390e-1470.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig12853contigE-fasciculatus_F_contig12853:107..761 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig12853.2152.1mRNA_E-fasciculatus_F_contig12853.2152.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig12853 107..763 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig12853.2152.1 ID=prot_E-fasciculatus_F_contig12853.2152.1|Name=mRNA_E-fasciculatus_F_contig12853.2152.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=173bp
GDTAYQKASQLIGNQLQLALSVVYRTNVACGAGRGLWKRRLRRLRQQNSS
SSSGSSNDNDDSSSEDSSDAEDAAAGGGARKSGKANRRKPPPAGGSSGGG
GSLLPSVSDLFSSTAGPDFLNAPGAGQDFVVKAMKKEKKKQAAAEATTDD
PTANAAGAAAATAKRERDVAAGV
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