prot_E-fasciculatus_F_contig1283.2140.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1283.2140.1
Unique Nameprot_E-fasciculatus_F_contig1283.2140.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length369
Homology
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BLAST of mRNA_E-fasciculatus_F_contig1283.2140.1 vs. uniprot
Match: D7FJ95_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ95_ECTSI)

HSP 1 Score: 545 bits (1405), Expect = 2.300e-192
Identity = 306/377 (81.17%), Postives = 315/377 (83.55%), Query Frame = 0 
Query:    1 MAERGMCHLPLASIPDGALAIVFSNITVNDLLSANKVCRAWVLDGTRVDLWASLGKIFQVTMPVSLGPQTSQRAGGSNGATAGGGRGKRVLRSGANAKRTFLKSYAAAVKSDRLKHDSTLSEAYTLFRMKDSVMRLRTLLRRRWGLTFHPSSKPHQNKSIENNQNSTXXXXXXXXXXXSRTREVGLSCPAAVAT-------AATLKAHTNAGGDD--GGGTWSGKSRWSFDVDHRHGIFEGNTLLNFAAVRCGRRKCVEFILWQMGADTEIADYGGFTPLLNTAWRGDAPLLKTLLAAGARLDVKGVSRGVGPFSPLEWAEHKNRPVTAAFLRSLAARGGGEGATXXXXXXXXXXXXXXXXXXAKEQTHSDVRVGAP 368
            MAE+G CHLPLA IPDGALAIVFS + VNDLLSANKVCR WVLDGTRVDLWASLGKIF+V MPVSLGPQTSQRA GS GATAGGGRGKRVLRSGANAKRTFLKSYAAAVKSDRLKHDSTLSEAYTLFRMKDSVMRLRTLLRRRWGLTFHPSSKP QNK IEN ++S XXXXXXXXXX     E+GL  P A AT       AATLKA TNAG D     GTWSGK+RWSF+VDHRHGIFEGNTLLNFA VRCGRRKCVEFILWQMGADTEIADYGGFTPLLNTAWRGDAPLLKTLLAAGARLDVKGVSRGVGPFSPLEWAE KNRPVTAAFLRSL AR   EG +                   KE THSDVRVGAP
Sbjct:   35 MAEKGTCHLPLAFIPDGALAIVFSFVAVNDLLSANKVCRDWVLDGTRVDLWASLGKIFEVAMPVSLGPQTSQRAAGSTGATAGGGRGKRVLRSGANAKRTFLKSYAAAVKSDRLKHDSTLSEAYTLFRMKDSVMRLRTLLRRRWGLTFHPSSKPDQNKRIENYESSXXXXXXXXXXXSG---ELGLFFPTATATSNCLSGTAATLKARTNAGADKDRARGTWSGKARWSFNVDHRHGIFEGNTLLNFA-VRCGRRKCVEFILWQMGADTEIADYGGFTPLLNTAWRGDAPLLKTLLAAGARLDVKGVSRGVGPFSPLEWAERKNRPVTAAFLRSLEAREE-EGGSAEGAGPGRGNNGKSKVKAPKEPTHSDVRVGAP 406
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BLAST of mRNA_E-fasciculatus_F_contig1283.2140.1 vs. uniprot
Match: A0A6H5KSU2_9PHAE (F-box domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSU2_9PHAE)

HSP 1 Score: 354 bits (908), Expect = 2.970e-119
Identity = 204/248 (82.26%), Postives = 214/248 (86.29%), Query Frame = 0 
Query:    1 MAERGMCHLPLASIPDGALAIVFSNITVNDLLSANKVCRAWVLDGTRVDLWASLGKIFQVTMPVSLGPQTSQRAGGSNGATAGGGRGKRVLRSGANAKRTFLKSYAAAVKSDRLKHDSTLSEAYTLFRMKDSVMRLRTLLRRRWGLTFHPSSKPHQNKSIENNQNSTXXXXXXXXXXXSRTREVGLSCPAAVATA-------ATLKAHTNAGGDD--GGGTWSGKSRWSFDVDHRHGIFEGNTLLNFA 239
            MAERG CHLPLA IPDGALAIVFS + VNDLLSANKVCR WVLDGTRV+LWASLGKIF+VTMPVSLGPQTSQRA GSNGATAGGGRGKRVLRSGANAKRTFLKSYAAAVKSDRLKHDSTLSEAYTLFRMKDSVMRLRTLLRRRWGLTFHPSSKP QNK IEN ++S+ XXXXXXXXXX     +GL  P A AT+       ATLKA TNA  D     GTWSGK+RWSF+VDHRHGIFEGNTLLNFA
Sbjct:    1 MAERGTCHLPLAFIPDGALAIVFSFLAVNDLLSANKVCRDWVLDGTRVNLWASLGKIFEVTMPVSLGPQTSQRAAGSNGATAGGGRGKRVLRSGANAKRTFLKSYAAAVKSDRLKHDSTLSEAYTLFRMKDSVMRLRTLLRRRWGLTFHPSSKPDQNKRIENCESSSGXXXXXXXXXXXXXX-LGLFIPTATATSSYLSGTVATLKARTNAESDKDKARGTWSGKARWSFNVDHRHGIFEGNTLLNFA 247
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BLAST of mRNA_E-fasciculatus_F_contig1283.2140.1 vs. uniprot
Match: A0A7S2UT73_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UT73_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 8.480e-10
Identity = 67/236 (28.39%), Postives = 102/236 (43.22%), Query Frame = 0 
Query:   91 LRSGANAKRTFLKSYAAAVKSDRLKHDSTLSEA-YTLFRMKDSVMRLRTLLRRRWGLTFHPSSKPHQNKSIENNQNSTXXXXXXXXXXXSRTREVGLSCPAAVATAATLKAHTNAGGDDGGGTWSGKSRWSFDVDHRHGIFEGNTLLNFAAVRCGRRKCVEFILWQMGADTEIADYGGFTPLLNTAWRGDAPLLKTLLAAGARLDVKGVSRGVGPF-SPLEWAEHKNRPVTAAFLR 324
            LRS  N K+TF   +    ++   +HD  L +    L R  DSV  LR  LR   GL   P SK  + +  +                   T +  L C ++     +L    ++ G          S+  FD +  H + +G T +N +A R G  + +  ++ Q GAD  + D  G TPLL  AWRGD  ++  L+ +GA +  +G SR   P  +   WA H+     A FL+
Sbjct:   13 LRSATNLKKTFFSLWWRQQRAREWRHDQFLQQLDQELKRGLDSVAALRRRLRPLMGL---PPSKRRRREYED-------------------TSDAELGCGSS-----SLPPCPSSPG----------SKAYFDPNWHHSVLDGTTAVNISA-RYGALRVLRSLVNQCGADVNVPDDNGLTPLLIAAWRGDMKMVHFLVDSGADVRAEGSSRSSIPKRNAAGWAHHRGHNEIAEFLK 210
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BLAST of mRNA_E-fasciculatus_F_contig1283.2140.1 vs. uniprot
Match: A0A7S2CKH5_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CKH5_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 3.090e-7
Identity = 38/103 (36.89%), Postives = 51/103 (49.51%), Query Frame = 0 
Query:  231 EGNTLLNFAAVRCGRRKCVEFILWQMGADTEIADYGGFTPLLNTAWRGDAPLLKTLLAAGARLDVKGVSRGVGPF-----SPLEWAEHKNRPVTAAFLRSLAA 328
            E N  LN A +   R  CV  +L + GAD  +AD GGF+PL++ AW GDA ++ TLL  GA  D  G S   G       +  EWA  +     A  + +  A
Sbjct:    2 ERNPALNLAVMH-RRHNCVAELL-RRGADVNLADRGGFSPLMDAAWNGDATMVVTLLKYGADPDAVGHSHFSGGIKTTERTAAEWARIRGHVEVAEHIENWVA 102
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BLAST of mRNA_E-fasciculatus_F_contig1283.2140.1 vs. uniprot
Match: A0A482STC7_9ARCH (PHD-type domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482STC7_9ARCH)

HSP 1 Score: 58.5 bits (140), Expect = 7.780e-6
Identity = 33/110 (30.00%), Postives = 59/110 (53.64%), Query Frame = 0 
Query:  221 FDVDHRHGIFEGNTLLNFAAVRCGRRKCVEFILWQMGADTEIADYGGFTPLLNTAWRGDAPLLKTLLAAGARLDVKGVSRGVGPFSPLEWAEHKNRPVTAAFLRSLAARG 330
            F+ ++R    E NTLL  +A R    KC++ ++ Q  AD  +A+ GGF+PL+  A+ G+ P ++ L+  GA + ++G  R     +   WA  +      ++LR +  +G
Sbjct:  129 FNPNYRCPTVESNTLLTLSA-RYTHLKCMKVLVDQFRADINVAEGGGFSPLVLCAFNGNLPAVRYLVGRGADITMRGRLRSGALLTAEHWAAVRGWGDVCSYLRVVRLKG 237
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1283.2140.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FJ95_ECTSI2.300e-19281.17Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KSU2_9PHAE2.970e-11982.26F-box domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A7S2UT73_9STRA8.480e-1028.39Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2CKH5_9STRA3.090e-736.89Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A482STC7_9ARCH7.780e-630.00PHD-type domain-containing protein n=1 Tax=archaeo... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 194..329
e-value: 8.1E-12
score: 46.8
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 230..326
IPR001810F-box domainPROSITEPS50181FBOXcoord: 8..54
score: 9.153
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 231..298
score: 14.053
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 266..298
score: 9.137
IPR036047F-box-like domain superfamilySUPERFAMILY81383F-box domaincoord: 6..45

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1283contigE-fasciculatus_F_contig1283:13851..17060 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1283.2140.1mRNA_E-fasciculatus_F_contig1283.2140.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1283 13813..17554 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1283.2140.1 ID=prot_E-fasciculatus_F_contig1283.2140.1|Name=mRNA_E-fasciculatus_F_contig1283.2140.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=369bp
MAERGMCHLPLASIPDGALAIVFSNITVNDLLSANKVCRAWVLDGTRVDL
WASLGKIFQVTMPVSLGPQTSQRAGGSNGATAGGGRGKRVLRSGANAKRT
FLKSYAAAVKSDRLKHDSTLSEAYTLFRMKDSVMRLRTLLRRRWGLTFHP
SSKPHQNKSIENNQNSTSGSSSSNNSSNSRTREVGLSCPAAVATAATLKA
HTNAGGDDGGGTWSGKSRWSFDVDHRHGIFEGNTLLNFAAVRCGRRKCVE
FILWQMGADTEIADYGGFTPLLNTAWRGDAPLLKTLLAAGARLDVKGVSR
GVGPFSPLEWAEHKNRPVTAAFLRSLAARGGGEGATAQGAGPGQGKNEKS
KAKAAKEQTHSDVRVGAP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036047F-box-like_dom_sf
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
IPR001810F-box_dom
IPR036770Ankyrin_rpt-contain_sf